prot_H-paniculata_contig8543.16516.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8543.16516.1
Unique Nameprot_H-paniculata_contig8543.16516.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length296
Homology
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BLAST of mRNA_H-paniculata_contig8543.16516.1 vs. uniprot
Match: A0A6H5JEL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL9_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 1.390e-79
Identity = 155/227 (68.28%), Postives = 179/227 (78.85%), Query Frame = 0 
Query:    1 MIVQKIRFHQHHPEYEDYWSPDTVNTNDTSGELGDTPTPQKLPTHDGSDEPRTLQVIQRLLSVQGSILITMSQAFEHLDKGNKDAVPCTRSSLLPLMAESYLTYIATTRVLLTVSEKYTTAGSKRGKARPDELVALSHQYELDLNAMQNLYKKADDVEEVSVMKRTPRLPAVSPLSEGGAKQFREMSRKSSGRSTFGRASSKMEALKTLQDEERKYNGSDNSQRSQG 227
            MIVQKIRFHQHHPEY  YWSPDT N  DT+    D P  ++LP     DE RTLQVI RL+ +Q SIL TM++AF  L KG KDA P TRS+LLPLMAESYLTY ATTRVLLTVS+KY T G  R KARPDELV+L  +YE DL  M+ LYK+AD+VEEV++MKRTPRLP VSPLSEGGAK+FREMSRK+S +STFGRASSKMEALKTL DEER++  S++S+   G
Sbjct:  741 MIVQKIRFHQHHPEYGYYWSPDTGNDTDTTPSTYDNPVSERLP-QQPRDEARTLQVISRLVILQRSILTTMTEAFMLLTKGAKDAGPSTRSALLPLMAESYLTYFATTRVLLTVSDKYCT-GQLRLKARPDELVSLLQKYETDLKIMRELYKRADEVEEVAIMKRTPRLPVVSPLSEGGAKKFREMSRKTSRQSTFGRASSKMEALKTLHDEERRFVDSNSSKLGDG 965
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BLAST of mRNA_H-paniculata_contig8543.16516.1 vs. uniprot
Match: D8LLR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR2_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 1.740e-72
Identity = 148/228 (64.91%), Postives = 167/228 (73.25%), Query Frame = 0 
Query:    1 MIVQKIRFHQHHPEYEDYWSPDTVNTNDTSGELGDTPTPQKLPTHDGSDEPRTLQVIQRLLSVQGSILITMSQAFEHLDKGNKDAVPCTRSSLLPLMAESYLTYIATTRVLLTVSEKYTTAGSKRGKARPDELVALSHQYELDLNAMQNLYKKADDVEEVSVMKRTPRLPAVSPLSEGGAKQFREMSRKSSGRSTFGRASSKMEALKTLQDEERKYNGSDNSQRSQGA 228
            MIVQKIRFHQHHPEY DYWSPDT N  DT+    D P  ++LP     DE RTLQ                  AF  L KG KDA P TRS+LLPLMAESYLTY ATTRVLLTVS+KY T G  R KARPD+LV+LS +YE DL  M+ LYK+AD+VEEV++MKRTPRLP VSPLSEGGAK+FREMSRK+S +STFGRASSKMEALKTL DEER++  SD+   S GA
Sbjct:  687 MIVQKIRFHQHHPEYGDYWSPDTGNDTDTTPTTYDNPVSERLP-QQPRDEARTLQ------------------AFMLLTKGAKDAGPSTRSALLPLMAESYLTYFATTRVLLTVSDKYCT-GQLRLKARPDQLVSLSQKYETDLKIMRELYKRADEVEEVAIMKRTPRLPVVSPLSEGGAKKFREMSRKTSRQSTFGRASSKMEALKTLHDEERRFVDSDDDSSSDGA 894
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8543.16516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JEL9_9PHAE1.390e-7968.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLR2_ECTSI1.740e-7264.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8543contigH-paniculata_contig8543:264..7546 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8543.16516.1mRNA_H-paniculata_contig8543.16516.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8543 257..7712 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8543.16516.1 ID=prot_H-paniculata_contig8543.16516.1|Name=mRNA_H-paniculata_contig8543.16516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=296bp
MIVQKIRFHQHHPEYEDYWSPDTVNTNDTSGELGDTPTPQKLPTHDGSDE
PRTLQVIQRLLSVQGSILITMSQAFEHLDKGNKDAVPCTRSSLLPLMAES
YLTYIATTRVLLTVSEKYTTAGSKRGKARPDELVALSHQYELDLNAMQNL
YKKADDVEEVSVMKRTPRLPAVSPLSEGGAKQFREMSRKSSGRSTFGRAS
SKMEALKTLQDEERKYNGSDNSQRSQGALFESEDGEDNSDDDSHDDGPFN
HHHQDADEPERASSSSSAAGGSGGGGGGSGDNGAGAGGAGGGGEL*
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