prot_H-paniculata_contig854.16514.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig854.16514.1
Unique Nameprot_H-paniculata_contig854.16514.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length190
Homology
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BLAST of mRNA_H-paniculata_contig854.16514.1 vs. uniprot
Match: D8LCD9_ECTSI (Bap31 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCD9_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 4.130e-49
Identity = 85/141 (60.28%), Postives = 110/141 (78.01%), Query Frame = 0 
Query:   50 GSNLWPTLIRILFPVPATFLFLVCLPLPSRGKQSITRWMLKVFDKIFTFRI-GFPLIYLIITASTALFLVMCLETYGFRAREVQTQDFTEKMHLRGRRWRAERNFYISLMSLIFAVLANRIRLLLKEMEELREQVKELRVR 189
             +NLWP LI+I+FP+PA+FL L+CLPL ++ +  I RW  +++DKIF+F++   PLIYLI+ AS ALF  MCLETYG R REV    F EKM+LRGRRWRAERNFYIS M L  +VLANR+RL+LKE++ L EQ++E+R R
Sbjct:    3 SNNLWPLLIKIIFPIPASFLLLICLPLSTQSR--IMRWTRRLYDKIFSFQVMSIPLIYLIMAASCALFAAMCLETYGLRVREVNATHFDEKMNLRGRRWRAERNFYISFMFLSCSVLANRVRLMLKEVDSLNEQIREMRKR 141
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BLAST of mRNA_H-paniculata_contig854.16514.1 vs. uniprot
Match: W7TBU6_9STRA (Bap31 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBU6_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.920e-12
Identity = 47/140 (33.57%), Postives = 74/140 (52.86%), Query Frame = 0 
Query:   50 GSNLWPTLIRILFPVPATFLFLVCLPLPSRGKQSITRWMLKVFDKIFTFRIGF-----PLIYLIITASTALFLVMCLETYGFRAREVQTQDFTEKMHLRGRRWRAERNFYISLMSLIFAVLANRIRLLLKEMEELREQVK 184
            GSN W   +  +FP+P  FL L+ LP P+R +  I   +L   ++I   R  +      LI +II  +    +    ++   R  E Q   F EK  LR +RWRAERNF++S++  +  V+  RI+ LL ++  L E++K
Sbjct:   46 GSNPWQLFLYFIFPIPLVFLVLISLPFPARYRAKIRVGILNALNRISFLRFDYGGASISLIAIIILIALLGLIFSANDSLNARRAENQAHFFAEKKELRCKRWRAERNFWLSVLGCVLWVVLLRIQTLLMDVGPLEERLK 185
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig854.16514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCD9_ECTSI4.130e-4960.28Bap31 domain-containing protein n=2 Tax=Ectocarpus... [more]
W7TBU6_9STRA2.920e-1233.57Bap31 domain-containing protein n=2 Tax=Monodopsid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..119
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..173
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..95
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 174..189
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.613
NoneNo IPR availableTMHMMTMhelixcoord: 57..76
NoneNo IPR availableTMHMMTMhelixcoord: 153..172
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
IPR040463BAP29/BAP31, transmembrane domainPFAMPF05529Bap31coord: 62..185
e-value: 1.1E-9
score: 38.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig854contigH-paniculata_contig854:25086..28971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig854.16514.1mRNA_H-paniculata_contig854.16514.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig854 25064..30521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig854.16514.1 ID=prot_H-paniculata_contig854.16514.1|Name=mRNA_H-paniculata_contig854.16514.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
MRDCSEQFVHISTCMFIFLSAFPLLSHCTQGARDYSLISVIDQEIVHTMG
SNLWPTLIRILFPVPATFLFLVCLPLPSRGKQSITRWMLKVFDKIFTFRI
GFPLIYLIITASTALFLVMCLETYGFRAREVQTQDFTEKMHLRGRRWRAE
RNFYISLMSLIFAVLANRIRLLLKEMEELREQVKELRVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040463BAP29/BAP31_N