prot_H-paniculata_contig8539.16511.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8539.16511.1
Unique Nameprot_H-paniculata_contig8539.16511.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length150
Homology
BLAST of mRNA_H-paniculata_contig8539.16511.1 vs. uniprot
Match: A0A6H5K1Z6_9PHAE (RRF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Z6_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 7.800e-71
Identity = 113/147 (76.87%), Postives = 134/147 (91.16%), Query Frame = 0
Query:    1 MLDHVQVDSYGSQTNLAAVAQASLKGPQLMVLTVYDPEMTKAVEDAVRECGMNLNPSVQGQGQVNVPIPKPTKESREAVAKVAAKAAEKAKVIMRGIRHKVLDQLKKKKDSFPEDDVHQRMKEIDKCTQEAEATAGKLLETKKKEIM 147
            MLD+V+V+SYGS TNLA+VAQAS+KGPQL++L+VYDP MTKA+EDAVRECGM LNP  +GQGQV+VPIPKPTKESREAVAKVAAK AEK+KV++RGIRHK+LDQ+KKKKDSFPEDDVH R+KEIDKCT++AEA    +LE KK EI+
Sbjct:  151 MLDNVKVESYGSMTNLASVAQASMKGPQLIILSVYDPGMTKAIEDAVRECGMGLNPYSEGQGQVHVPIPKPTKESREAVAKVAAKHAEKSKVVVRGIRHKILDQIKKKKDSFPEDDVHMRIKEIDKCTKDAEAGIASMLEKKKAEIL 297          
BLAST of mRNA_H-paniculata_contig8539.16511.1 vs. uniprot
Match: A0A836CM55_9STRA (Ribosome recycling factor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM55_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.550e-38
Identity = 85/157 (54.14%), Postives = 103/157 (65.61%), Query Frame = 0
Query:    1 MLDHVQVDSYGSQTNLAAVAQASLKGPQLMVLTVYDPEMTKAVEDAVRECGMNLNPSVQGQG----------QVNVPIPKPTKESREAVAKVAAKAAEKAKVIMRGIRHKVLDQLKKKKDSFPEDDVHQRMKEIDKCTQEAEATAGKLLETKKKEIM 147
            M DH+ V SYG +  L++VAQ S KGPQL+VLT YDP    AV  AVR+ GMNLNP + G             V VPIPK + E+RE++ KVA KA EKAKV MRGIRHKVL++LKK K +F EDDVH+R KEID      EA     L+ KKK+I+
Sbjct:  177 MFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKKHKANFSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDIL 333          
BLAST of mRNA_H-paniculata_contig8539.16511.1 vs. uniprot
Match: A0A6V1LRG3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LRG3_HETAK)

HSP 1 Score: 116 bits (290), Expect = 5.410e-29
Identity = 62/147 (42.18%), Postives = 92/147 (62.59%), Query Frame = 0
Query:    1 MLDHVQVDSYGSQTNLAAVAQASLKGPQLMVLTVYDPEMTKAVEDAVRECGMNLNPSVQGQGQVNVPIPKPTKESREAVAKVAAKAAEKAKVIMRGIRHKVLDQLKKKKDSFPEDDVHQRMKEIDKCTQEAEATAGKLLETKKKEIM 147
            M DH+QVD+YG    L+AVA  + +GPQL+V+ VYDP++  AV+ A+RECGM LNP     G ++VP+PK +KE RE +A++A +  EK K  +R  R   +D+ KK     PED+  + +KEID            L++ K+KE++
Sbjct:  127 MFDHLQVDAYGQSAPLSAVADVAPRGPQLLVVNVYDPQLKGAVDTAIRECGMGLNPQALEGGALSVPVPKTSKEKREKLARMAKQQGEKTKQNVRNARRSAIDETKKA--GLPEDESKRLVKEIDALCDAKLKAVSDLIDGKQKELL 271          
BLAST of mRNA_H-paniculata_contig8539.16511.1 vs. uniprot
Match: A0A2R5G176_9STRA (Ribosome-recycling factor n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G176_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.290e-25
Identity = 65/150 (43.33%), Postives = 95/150 (63.33%), Query Frame = 0
Query:    1 MLDHVQVDSYGSQTNLAAVAQASLKGPQLMVLTVYDPEMTKAVEDAVRECGMNLNPSVQGQGQVNVPIPKPTKESREAVAKVAAKAAEKAKVIMRGIRH---KVLDQLKKKKDSFPEDDVHQRMKEIDKCTQEAEATAGKLLETKKKEIM 147
            MLDH+ V++YG+ + L +VAQ S++  +L+V+ V+D  +  AV  A+    MNLNPSV+G  QVNVP+PK TKESREA A++A    EK K  + G+RH   K L  +KK KD   ED      + +++ T E +    ++ ET++KEIM
Sbjct:  124 MLDHLMVEAYGASSPLNSVAQGSIRSSKLLVVNVFDQSLVGAVAKAIETANMNLNPSVEG-AQVNVPLPKLTKESREATARLAHDLYEKTKGAVNGVRHDAMKKLTNMKKNKD-LSEDQHFAETQAVEELTDEFKKRIAEMSETRQKEIM 271          
BLAST of mRNA_H-paniculata_contig8539.16511.1 vs. uniprot
Match: A0A812WBC3_SYMMI (Frr protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WBC3_SYMMI)

HSP 1 Score: 107 bits (266), Expect = 1.370e-25
Identity = 65/147 (44.22%), Postives = 88/147 (59.86%), Query Frame = 0
Query:    1 MLDHVQVDSYGSQTNLAAVAQASLKGPQLMVLTVYDPEMTKAVEDAVRECGMNLNPSVQGQGQVNVPIPKPTKESREAVAKVAAKAAEKAKVIMRGIRHKVLDQLKKKKDSFPEDDVHQRMKEIDKCTQEAEATAGKLLETKKKEIM 147
            M +H+QV  YG    LA   Q SLKG   + +  YDP + KAV D +R+CGM+LNP+++G G V V IPK + E+R  + K+A KAAEK K  +R IR   +D +KK K    EDD  + MKEID  T+    T     + K+KEI+
Sbjct:  116 MFNHLQVPGYGG---LAETGQISLKGGNRLTINCYDPTLVKAVADCIRDCGMSLNPTIEG-GAVVVLIPKASAEARTEMVKLAGKAAEKVKQEIRQIRKVSMDDVKKLKSQVSEDDSRKLMKEIDTVTERKVDTVTAAFKAKEKEIL 258          
BLAST of mRNA_H-paniculata_contig8539.16511.1 vs. uniprot
Match: A0A286H2T3_9PROT (Ribosome-recycling factor n=2 Tax=Caenispirillum bisanense TaxID=414052 RepID=A0A286H2T3_9PROT)

HSP 1 Score: 104 bits (259), Expect = 3.150e-25
Identity = 65/151 (43.05%), Postives = 96/151 (63.58%), Query Frame = 0
Query:    1 MLDHVQVDSYGSQTNLAAVAQASLKGPQLMVLTVYDPEMTKAVEDAVRECGMNLNPSVQGQGQVNVPIPKPTKESREAVAKVAAKAAEKAKVIMRGIRHKVLDQLKK-KKDSFPEDDVHQ-RMKEIDKCTQEAEATAGKLLETKKKEIMML 149
            +LD V VD+YGS   L  VA  S+  P+++V++V+D  MTKAVE A+R+ G+ LNP+ +GQ  + VPIP  T+E R  ++KVAAK  E A+V +R +R   +D LKK +KD     D H+    E+ + T EA  T  + L+ K++EIM +
Sbjct:   42 LLDPVVVDAYGSSMPLNQVANVSVPEPRMLVVSVWDRSMTKAVEKAIRDAGLGLNPAAEGQS-IRVPIPPLTEERRTELSKVAAKYTEAARVAIRNVRRDGMDSLKKMEKDGVISQDEHRTHSTEVQQLTDEAIKTVDETLKHKEQEIMQV 191          
BLAST of mRNA_H-paniculata_contig8539.16511.1 vs. uniprot
Match: K9HKD2_9PROT (Ribosome-recycling factor n=2 Tax=Caenispirillum TaxID=414051 RepID=K9HKD2_9PROT)

HSP 1 Score: 101 bits (252), Expect = 3.520e-24
Identity = 62/151 (41.06%), Postives = 94/151 (62.25%), Query Frame = 0
Query:    1 MLDHVQVDSYGSQTNLAAVAQASLKGPQLMVLTVYDPEMTKAVEDAVRECGMNLNPSVQGQGQVNVPIPKPTKESREAVAKVAAKAAEKAKVIMRGIRHKVLDQLKK--KKDSFPEDDVHQRMKEIDKCTQEAEATAGKLLETKKKEIMML 149
            +LD V V++YGS   L  VA  S+  P+++V++V+D  M KAVE A+R  G+ LNP+ +GQ  + VPIP  T+E R  + KVAAK  E A+V +R +R   +DQLKK  K  +  +D+     KE+ + T E  +T  + L+ K++EIM +
Sbjct:   42 LLDPVVVEAYGSTMPLNQVANVSVPEPRMLVVSVWDRSMIKAVEKAIRNAGLGLNPAAEGQ-TIRVPIPPLTEERRAELTKVAAKYGENARVAVRNVRRDGMDQLKKMEKDGTISQDEQRAHEKEVQQLTDETISTIDETLKHKEQEIMQV 191          
BLAST of mRNA_H-paniculata_contig8539.16511.1 vs. uniprot
Match: K2KDB1_9PROT (Ribosome-recycling factor n=3 Tax=Oceanibaculum TaxID=659693 RepID=K2KDB1_9PROT)

HSP 1 Score: 100 bits (250), Expect = 6.040e-24
Identity = 64/151 (42.38%), Postives = 95/151 (62.91%), Query Frame = 0
Query:    1 MLDHVQVDSYGSQTNLAAVAQASLKGPQLMVLTVYDPEMTKAVEDAVRECGMNLNPSVQGQGQVNVPIPKPTKESREAVAKVAAKAAEKAKVIMRGIRHKVLDQLKK-KKDSFPEDDVHQRM-KEIDKCTQEAEATAGKLLETKKKEIMML 149
            +++ V VD+YGSQ  L  VA  S+  P+++ + V+D  M KAVE A+RE G+ LNP  +G   + +PIP  ++E R+ + KVAAK AE+A+V +R +R   +D LK+ +KDS    D H+R  K+I K T +A A   + L  K KEIM +
Sbjct:   36 LVEPVTVDAYGSQMALNQVASVSVPEPRMLTVQVWDNSMVKAVEKAIREAGLGLNPQTEGN-VIRLPIPDLSEERRQELTKVAAKYAEQARVSIRNVRRDGMDLLKRLEKDSEISQDEHRRYEKDIQKMTDDAIAEVDQALAVKDKEIMQV 185          
BLAST of mRNA_H-paniculata_contig8539.16511.1 vs. uniprot
Match: UPI00048B0AB8 (ribosome recycling factor n=1 Tax=Cucumibacter marinus TaxID=1121252 RepID=UPI00048B0AB8)

HSP 1 Score: 99.4 bits (246), Expect = 2.400e-23
Identity = 61/151 (40.40%), Postives = 93/151 (61.59%), Query Frame = 0
Query:    1 MLDHVQVDSYGSQTNLAAVAQASLKGPQLMVLTVYDPEMTKAVEDAVRECGMNLNPSVQGQGQVNVPIPKPTKESREAVAKVAAKAAEKAKVIMRGIRHKVLDQLKK--KKDSFPEDDVHQRMKEIDKCTQEAEATAGKLLETKKKEIMML 149
            MLD V VD+YGSQ  +  VA  S    +L+ + V+D  MT AV+ A+RE G+ LNP+ +G   + VP+P+  +E R  + KVA + AE+A+V +R IR   +D LKK  K     +D++H +  ++ K T +A A   ++L TK+KEIM +
Sbjct:   36 MLDPVMVDAYGSQMPINQVATVSAPEARLITVQVWDKSMTAAVDKAIRESGLGLNPASEGT-LIRVPLPELNEERRREITKVAHQYAEQARVAVRHIRRDGMDILKKLEKDGDMSQDEMHSQSDQVQKATDDAVAQIDEMLATKEKEIMQV 185          
BLAST of mRNA_H-paniculata_contig8539.16511.1 vs. uniprot
Match: A0A7S2KXT1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXT1_9STRA)

HSP 1 Score: 101 bits (251), Expect = 5.550e-23
Identity = 59/150 (39.33%), Postives = 94/150 (62.67%), Query Frame = 0
Query:    1 MLDHVQVDSYGSQTNLAAVAQASLKGPQLMVLTVYDPEMTKAVEDAVRECGMNLNPSVQGQGQVNVPIPKPTKESREAVAKVAAKAAEKAKVIMRGIRHKVLDQLKKKKDS-FPEDDVHQRMKEIDKCTQEAEATAGKLLETKKKEIMML 149
            + +++ VD+YG++T L  +AQ  + G   +VLT YDP +   V DAVR+ GM+ NP ++ +G+V VPIPK +KE+RE ++K   K AE+ +  +R IR    D +KK KD+ F +D+  +  KEID  T++  A     ++ KK+ IM +
Sbjct:  161 LFENIMVDAYGTRTPLTGLAQVVVAGSNRVVLTPYDPSVANNVRDAVRDAGMSFNPQIE-EGEVIVPIPKVSKETREILSKKIGKMAEENRQRVRNIRRSYHDHIKKCKDAGFSKDETFRCSKEIDSVTEDVLAVLNDEVDRKKESIMQV 309          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8539.16511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1Z6_9PHAE7.800e-7176.87RRF domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CM55_9STRA1.550e-3854.14Ribosome recycling factor domain-containing protei... [more]
A0A6V1LRG3_HETAK5.410e-2942.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2R5G176_9STRA1.290e-2543.33Ribosome-recycling factor n=1 Tax=Hondaea fermenta... [more]
A0A812WBC3_SYMMI1.370e-2544.22Frr protein n=1 Tax=Symbiodinium microadriaticum T... [more]
A0A286H2T3_9PROT3.150e-2543.05Ribosome-recycling factor n=2 Tax=Caenispirillum b... [more]
K9HKD2_9PROT3.520e-2441.06Ribosome-recycling factor n=2 Tax=Caenispirillum T... [more]
K2KDB1_9PROT6.040e-2442.38Ribosome-recycling factor n=3 Tax=Oceanibaculum Ta... [more]
UPI00048B0AB82.400e-2340.40ribosome recycling factor n=1 Tax=Cucumibacter mar... [more]
A0A7S2KXT1_9STRA5.550e-2339.33Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.132.20coord: 72..146
e-value: 3.6E-43
score: 149.0
NoneNo IPR availableGENE3D3.30.1360.40coord: 1..71
e-value: 3.6E-43
score: 149.0
NoneNo IPR availablePANTHERPTHR20982:SF3MITOCHONDRIAL RIBOSOME RECYCLING FACTORcoord: 1..147
IPR023584Ribosome recycling factor domainPFAMPF01765RRFcoord: 1..147
e-value: 4.5E-43
score: 147.0
IPR002661Ribosome recycling factorPANTHERPTHR20982RIBOSOME RECYCLING FACTORcoord: 1..147
IPR036191RRF superfamilySUPERFAMILY55194Ribosome recycling factor, RRFcoord: 1..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8539contigH-paniculata_contig8539:2293..5398 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8539.16511.1mRNA_H-paniculata_contig8539.16511.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8539 2287..5972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8539.16511.1 ID=prot_H-paniculata_contig8539.16511.1|Name=mRNA_H-paniculata_contig8539.16511.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=150bp
MLDHVQVDSYGSQTNLAAVAQASLKGPQLMVLTVYDPEMTKAVEDAVREC
GMNLNPSVQGQGQVNVPIPKPTKESREAVAKVAAKAAEKAKVIMRGIRHK
VLDQLKKKKDSFPEDDVHQRMKEIDKCTQEAEATAGKLLETKKKEIMML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023584Ribosome_recyc_fac_dom
IPR002661Ribosome_recyc_fac
IPR036191RRF_sf