prot_H-paniculata_contig8538.16509.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8538.16509.1
Unique Nameprot_H-paniculata_contig8538.16509.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length103
Homology
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BLAST of mRNA_H-paniculata_contig8538.16509.1 vs. uniprot
Match: A0A6H5L487_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L487_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.420e-25
Identity = 56/110 (50.91%), Postives = 71/110 (64.55%), Query Frame = 0 
Query:    1 MLRAEDMPLGKPNELSLQDIVEFCKENGVGLELVPTGRNLQPPSLSMSDLGLEPEFDCSHTEDG---RPQPPAA------KVGDESLFTPQELARIKSQFEKSFGPAEEQ 101
            MLRAED+PLG+P EL +  I+EFCK+NGVGLE+VP GR L PPS +   +  +     SH +DG   R    AA      +  + SLFTPQELARIK QFEKS   ++E+
Sbjct:  168 MLRAEDLPLGRPTELPMSQIIEFCKDNGVGLEIVPRGRGLHPPSRNKPHIDFDYSKSSSHGQDGGSARGSSTAAAGTGRPRQDESSLFTPQELARIKKQFEKSLEDSDEE 277
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BLAST of mRNA_H-paniculata_contig8538.16509.1 vs. uniprot
Match: D8LS92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS92_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 1.730e-16
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0 
Query:    1 MLRAEDMPLGKPNELSLQDIVEFCKENGVGLELVPTGRNLQPPSLSMSDLGL 52
            MLRAED+PLG+P EL +  I+EFCK+NGVGLE+VPTGR L PPS +   + L
Sbjct:   25 MLRAEDLPLGRPTELPMSQIIEFCKDNGVGLEIVPTGRGLHPPSRNKPQMCL 76
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8538.16509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L487_9PHAE1.420e-2550.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS92_ECTSI1.730e-1663.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021503Protein of unknown function DUF3110PFAMPF11360DUF3110coord: 1..43
e-value: 3.0E-6
score: 27.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8538contigH-paniculata_contig8538:5282..7313 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8538.16509.1mRNA_H-paniculata_contig8538.16509.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8538 4527..8062 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8538.16509.1 ID=prot_H-paniculata_contig8538.16509.1|Name=mRNA_H-paniculata_contig8538.16509.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
MLRAEDMPLGKPNELSLQDIVEFCKENGVGLELVPTGRNLQPPSLSMSDL
GLEPEFDCSHTEDGRPQPPAAKVGDESLFTPQELARIKSQFEKSFGPAEE
QP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021503DUF3110