prot_H-paniculata_contig8532.16504.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8532.16504.1
Unique Nameprot_H-paniculata_contig8532.16504.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length156
Homology
[Close]
BLAST of mRNA_H-paniculata_contig8532.16504.1 vs. uniprot
Match: D8LR14_ECTSI (Flagellar associated protein, transcriptional coactivator-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR14_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 4.610e-79
Identity = 135/155 (87.10%), Postives = 136/155 (87.74%), Query Frame = 0 
Query:    1 MSQDWNTVMISKTRPTATRGQKNAATAAAQRSGTLETERKFAAGENKSSHRGHMNMKKLDDETEEFQLFVALSRLASPWDVDADTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKAKK 155
            MSQDWNTVMISKTRPTATRGQKNAATAAA RSGTL+TERKFAAGENKSSHRGHMNMKKLDDETEEFQ                 TRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKK KK
Sbjct:    1 MSQDWNTVMISKTRPTATRGQKNAATAAAARSGTLDTERKFAAGENKSSHRGHMNMKKLDDETEEFQ----------------HTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKGKK 139
[Close]
BLAST of mRNA_H-paniculata_contig8532.16504.1 vs. uniprot
Match: A0A835ZEI2_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI2_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.330e-51
Identity = 95/153 (62.09%), Postives = 115/153 (75.16%), Query Frame = 0 
Query:    3 QDWNTVMISKTRPTATRGQKNAATAAAQRSGTLETERKFAAGENKSSHRGHMNMKKLDDETEEFQLFVALSRLASPWDVDADTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKAKK 155
            QDW+TV ++K R   T+G KNAA A A R+GTL+TE+++A GENKS+H  HMN+KKLD++T+  +                  RVDR LAQAIQQARLGKK+TQKQLAT INEKPQVVGEYESGKA+PNPQLI K+ERALG RLPRP + +KK
Sbjct:    4 QDWDTVTLAKNRAPTTKGAKNAAVATALRTGTLQTEKRWAGGENKSTHAPHMNLKKLDEDTDNLK----------------HDRVDRSLAQAIQQARLGKKLTQKQLATMINEKPQVVGEYESGKALPNPQLIVKIERALGTRLPRPKRASKK 140
[Close]
BLAST of mRNA_H-paniculata_contig8532.16504.1 vs. uniprot
Match: A0A7S2UVN6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVN6_9STRA)

HSP 1 Score: 140 bits (353), Expect = 4.420e-40
Identity = 87/135 (64.44%), Postives = 96/135 (71.11%), Query Frame = 0 
Query:   21 QKNAATAAAQRSGTLETERKFAAGENKSSHRGH-MNMKKLDDETEEFQLFVALSRLASPWDVDADTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKAK 154
            QKN +   A RSG + TERKFAAGENKS H     NM+KLDDETEEF+                  RVDR LA AIQQARL KKMTQK LAT INEKPQ+VGEYESG+AIPNPQ+IS++ERALGVRLPR G K K
Sbjct:    6 QKNQSLQRALRSGNVATERKFAAGENKSVHASTGKNMRKLDDETEEFK----------------HDRVDRSLALAIQQARLAKKMTQKALATAINEKPQIVGEYESGRAIPNPQMISRMERALGVRLPRGGGKKK 124
[Close]
BLAST of mRNA_H-paniculata_contig8532.16504.1 vs. uniprot
Match: A0A6U3TVK3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3TVK3_9STRA)

HSP 1 Score: 121 bits (304), Expect = 3.560e-32
Identity = 75/151 (49.67%), Postives = 98/151 (64.90%), Query Frame = 0 
Query:    3 QDWNTVMISKTRPTATRGQKNA-ATAAAQRSGTLETERKFAAGENKSSHRGHMNMKKLDDETEEFQLFVALSRLASPWDVDADTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKK 152
            QDW  V + ++        K A     A+  G L TE+KF AG N+S+H   +N KK++D ++E +L                 +VD+ L++AIQQAR+ KKMTQK LAT+INEKPQVVGEYESGKA+PN Q+I K+ER LGV+LPRPGKK
Sbjct:   10 QDWGAVNVGRSSAGRVAVPKTAHGVTRAKAMGLLATEKKFGAGGNRSAHTASVNAKKIED-SDELKL----------------NKVDKSLSKAIQQARMAKKMTQKDLATRINEKPQVVGEYESGKAVPNGQIIVKMERVLGVKLPRPGKK 143
[Close]
BLAST of mRNA_H-paniculata_contig8532.16504.1 vs. uniprot
Match: A0A7S2YM08_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YM08_9STRA)

HSP 1 Score: 122 bits (306), Expect = 8.260e-32
Identity = 79/153 (51.63%), Postives = 102/153 (66.67%), Query Frame = 0 
Query:    3 QDWNTVMISKTR--PTATRGQKNA-ATAAAQRSGTLETERKFAAGENKSSH-RGHMNMKKLDDETEEFQLFVALSRLASPWDVDADTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGK 151
            QDW+ V + ++   P  T   K+A A   A+  G + TE+K+ AG NKS+H +G ++ KKL++ T                DV    +VD+ L++AI QAR  KKMTQK+LAT INEKPQVVGEYESGKA+PNPQ+ISKLER LGV+LPRPGK
Sbjct:   53 QDWDAVNVGRSGGGPARTSVPKSARALDHAKAQGLVATEKKYGAGGNKSAHSQGALSTKKLEEAT----------------DVGIIAKVDKSLSKAIMQARTAKKMTQKELATAINEKPQVVGEYESGKAVPNPQIISKLERKLGVKLPRPGK 189
[Close]
BLAST of mRNA_H-paniculata_contig8532.16504.1 vs. uniprot
Match: A0A7S4MPQ6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MPQ6_9STRA)

HSP 1 Score: 120 bits (302), Expect = 9.180e-32
Identity = 76/153 (49.67%), Postives = 102/153 (66.67%), Query Frame = 0 
Query:    3 QDWNTVMISKTRPTATRGQKNAATA--AAQRSGTLETERKFAAGENKSSHRGH-MNMKKLDDETEEFQLFVALSRLASPWDVDADTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKK 152
            QDW+ V + ++  +  +    +A    AA+ SG + TERK  AG N+S+H G  +N KKL+ E++E +                  +VD+ L++AI QAR+ KKMTQK+LAT INEKPQV+GEYESGKAIPNPQ+ISK+ER LG +LPRPGKK
Sbjct:   10 QDWDAVNVGRSGASGRKAVPKSAAGITAAKASGLVATERKHGAGGNRSAHSGSGVNAKKLE-ESDELK----------------HAKVDKSLSKAIMQARMAKKMTQKELATAINEKPQVIGEYESGKAIPNPQIISKMERKLGCKLPRPGKK 145
[Close]
BLAST of mRNA_H-paniculata_contig8532.16504.1 vs. uniprot
Match: A0A6U3S3Y8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3S3Y8_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.090e-30
Identity = 79/157 (50.32%), Postives = 97/157 (61.78%), Query Frame = 0 
Query:    3 QDWNTVMIS------KTRPTATRGQKNAATAAAQRSGTLETERKFAAGENKSSHRGH-MNMKKLDDETEEFQLFVALSRLASPWDVDADTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKK 152
            QDW  V +       KT P    G   A  A     G L TE+KF AG N+S+H G  +N KKL+ ET+E +                 ++VD+ L++AI QAR  KK+TQK LAT INEKPQV+ EYESGKAIPNPQ+ISK+ER LGV+LPRPGKK
Sbjct:   10 QDWGAVNVGSSSVRKKTVPKTAHGITQAKAA-----GLLATEKKFGAGGNRSAHSGAGVNAKKLE-ETDELK----------------HSKVDKSLSKAIMQARTAKKLTQKDLATAINEKPQVIAEYESGKAIPNPQIISKMERKLGVKLPRPGKK 144
[Close]
BLAST of mRNA_H-paniculata_contig8532.16504.1 vs. uniprot
Match: A0A6U5JHQ0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5JHQ0_9STRA)

HSP 1 Score: 115 bits (289), Expect = 9.560e-30
Identity = 77/160 (48.12%), Postives = 104/160 (65.00%), Query Frame = 0 
Query:    1 MSQDWNTVMISKT-RPTAT--RGQKNAATAA-AQRSGTLETERKFAAGENKSSHRGHMNMKKLDDETEEFQLFVALSRLASPWDVDADT----RVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKK 152
            ++QD+ TV I +T RP  +  R  +NA + A A+  G + TE+KF  G N S+H   +N +K++D                     ADT    +VDR L++AIQQAR+ +KM+QK LAT+INEKPQ++GEYESGKAIPN Q+ISK+ERAL  +LPRPGKK
Sbjct:    8 VTQDFTTVSIGRTARPGGSHPRVPQNAQSLARAKAMGLVTTEKKFGGGSNSSAHTASVNARKIED---------------------ADTFRVAKVDRSLSKAIQQARMAQKMSQKDLATKINEKPQIIGEYESGKAIPNGQIISKIERALNCKLPRPGKK 146
[Close]
BLAST of mRNA_H-paniculata_contig8532.16504.1 vs. uniprot
Match: A0A067CG61_SAPPC (HTH cro/C1-type domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CG61_SAPPC)

HSP 1 Score: 114 bits (286), Expect = 1.080e-29
Identity = 78/152 (51.32%), Postives = 95/152 (62.50%), Query Frame = 0 
Query:    3 QDWNTVMISKTRPTATRGQ--KNAATAAAQRSGTLETERKFAAGENKSSHRGHMNMKKLDDETEEFQLFVALSRLASPWDVDADTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKK 152
            QDW     +K R     G   K AA   A+R+G + TE K   G N+S+H    NM+KLD++TE F+                DT VDR L+QA+ +ARL K MTQK LAT INEKPQV+GEYESG+AIPNP +ISK+ERALG RLPR  KK
Sbjct:    7 QDWEVQGWNKARSGGRIGNESKEAALNRARRAGNVSTEVKHTNGLNRSAHGAAGNMRKLDEDTENFK---------------HDT-VDRSLSQALSKARLDKGMTQKALATAINEKPQVIGEYESGRAIPNPAIISKIERALGCRLPRGPKK 142
[Close]
BLAST of mRNA_H-paniculata_contig8532.16504.1 vs. uniprot
Match: K3WS97_GLOUD (HTH cro/C1-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS97_GLOUD)

HSP 1 Score: 114 bits (285), Expect = 1.370e-29
Identity = 78/153 (50.98%), Postives = 97/153 (63.40%), Query Frame = 0 
Query:    3 QDWNTVMISKTRPTATRGQKNAATAAAQRSGTLETERKFAAGENKSSHRG-HMNMKKLDDETEEFQLFVALSRLASPWDVDADTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKAK 154
            QDW+T   S   P A+   K+    AA+R G +  E K  AG NKSSH G ++NM+KL+++TE F+  V                VDR L+QA+ +AR  KKMTQK LAT INEKPQV+ EYESGKAIPN Q+I+KLERALG +LPR   K K
Sbjct:    7 QDWSTAGWSNKGP-ASGAAKSQQMNAARRQGNVVAEAKHMAGTNKSSHSGANVNMRKLEEDTETFKHNV----------------VDRSLSQALIKARTEKKMTQKALATTINEKPQVIAEYESGKAIPNGQIIAKLERALGAKLPRGAPKKK 142
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8532.16504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR14_ECTSI4.610e-7987.10Flagellar associated protein, transcriptional coac... [more]
A0A835ZEI2_9STRA1.330e-5162.09Flagellar associated protein n=1 Tax=Tribonema min... [more]
A0A7S2UVN6_9STRA4.420e-4064.44Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U3TVK3_9STRA3.560e-3249.67Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2YM08_9STRA8.260e-3251.63Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S4MPQ6_9STRA9.180e-3249.67Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A6U3S3Y8_9STRA2.090e-3050.32Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6U5JHQ0_9STRA9.560e-3048.13Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A067CG61_SAPPC1.080e-2951.32HTH cro/C1-type domain-containing protein n=3 Tax=... [more]
K3WS97_GLOUD1.370e-2950.98HTH cro/C1-type domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001387Cro/C1-type helix-turn-helix domainSMARTSM00530mbf_short4coord: 94..149
e-value: 3.1E-11
score: 53.3
IPR001387Cro/C1-type helix-turn-helix domainPFAMPF01381HTH_3coord: 95..146
e-value: 3.9E-13
score: 49.2
IPR001387Cro/C1-type helix-turn-helix domainPROSITEPS50943HTH_CROC1coord: 95..149
score: 13.053
NoneNo IPR availableGENE3D1.10.260.40coord: 80..155
e-value: 3.1E-27
score: 95.8
NoneNo IPR availablePANTHERPTHR10245ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1coord: 1..148
NoneNo IPR availablePANTHERPTHR10245:SF15ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1coord: 1..148
IPR013729Multiprotein bridging factor 1, N-terminalPFAMPF08523MBF1coord: 3..67
e-value: 7.3E-18
score: 64.8
IPR010982Lambda repressor-like, DNA-binding domain superfamilySUPERFAMILY47413lambda repressor-like DNA-binding domainscoord: 91..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8532contigH-paniculata_contig8532:2771..6120 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8532.16504.1mRNA_H-paniculata_contig8532.16504.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8532 23..6180 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8532.16504.1 ID=prot_H-paniculata_contig8532.16504.1|Name=mRNA_H-paniculata_contig8532.16504.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bp
MSQDWNTVMISKTRPTATRGQKNAATAAAQRSGTLETERKFAAGENKSSH
RGHMNMKKLDDETEEFQLFVALSRLASPWDVDADTRVDRGLAQAIQQARL
GKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPG
KKAKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001387Cro/C1-type_HTH
IPR013729MBF1_N
IPR010982Lambda_DNA-bd_dom_sf