prot_H-paniculata_contig8530.16502.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig8530.16502.1
Unique Name	prot_H-paniculata_contig8530.16502.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	96

Homology

[Close]

BLAST of mRNA_H-paniculata_contig8530.16502.1 vs. uniprot
Match: A0A6H5L214_9PHAE (Plug_translocon domain-containing protein n=3 Tax=PX clade TaxID=569578 RepID=A0A6H5L214_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 4.380e-54
Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0

Query:    1 IPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKVGG 96
            IPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQK+ G
Sbjct:   24 IPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKLFG 119

[Close]

BLAST of mRNA_H-paniculata_contig8530.16502.1 vs. uniprot
Match: A0A4D9D8Z0_9STRA (Plug_translocon domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8Z0_9STRA)

HSP 1 Score: 181 bits (458), Expect = 4.760e-53
Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0

Query:    1 IPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKVGG 96
            IPFREKVLWTV+TLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTS LVMQLLAGSRIIEVNQS+KEDRALFSGAQK+ G
Sbjct:   26 IPFREKVLWTVVTLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVNQSLKEDRALFSGAQKLFG 121

[Close]

BLAST of mRNA_H-paniculata_contig8530.16502.1 vs. uniprot
Match: A0A7S2SC71_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SC71_9STRA)

HSP 1 Score: 171 bits (434), Expect = 7.140e-53
Identity = 83/96 (86.46%), Postives = 91/96 (94.79%), Query Frame = 0

Query:    1 IPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKVGG 96
            IPFRE+VLWT++ LFIFLVCCQIPIYGVQSAKSSDPFYWMRV+LASNRGTLMELGISPIVTS LVMQLLAGSR+I VNQS++EDRALF GAQK+ G
Sbjct:   26 IPFRERVLWTIVVLFIFLVCCQIPIYGVQSAKSSDPFYWMRVLLASNRGTLMELGISPIVTSGLVMQLLAGSRVIAVNQSVREDRALFQGAQKLFG 121

[Close]

BLAST of mRNA_H-paniculata_contig8530.16502.1 vs. uniprot
Match: A0A812V906_SYMMI (Sec61a protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V906_SYMMI)

HSP 1 Score: 174 bits (441), Expect = 1.100e-51
Identity = 85/96 (88.54%), Postives = 93/96 (96.88%), Query Frame = 0

Query:    1 IPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKVGG 96
            IPFREKVLWTV+TLFIFLVCCQIP+YG+ ++K+SDPFYWMRVILASNRGTLMELGISPIVTS LVMQLLAGSRIIEVNQS+KEDRALFSGAQK+ G
Sbjct:   24 IPFREKVLWTVVTLFIFLVCCQIPLYGIHASKTSDPFYWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVNQSLKEDRALFSGAQKLFG 119

[Close]

BLAST of mRNA_H-paniculata_contig8530.16502.1 vs. uniprot
Match: A0A7S2B8N6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B8N6_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.280e-51
Identity = 81/96 (84.38%), Postives = 89/96 (92.71%), Query Frame = 0

Query:    1 IPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKVGG 96
            IPFRE++LWTVI LFIFLVCCQIP+YGVQ+ KSSDPFYW+RV+LASNRGTLMELGISPIVTS LVMQLLAGS IIEVNQ +KEDRALF GAQK+ G
Sbjct:   19 IPFRERILWTVIVLFIFLVCCQIPLYGVQTTKSSDPFYWVRVLLASNRGTLMELGISPIVTSGLVMQLLAGSNIIEVNQGLKEDRALFQGAQKLFG 114

[Close]

BLAST of mRNA_H-paniculata_contig8530.16502.1 vs. uniprot
Match: A0A7S1D8Y6_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D8Y6_CYCTE)

HSP 1 Score: 173 bits (439), Expect = 2.660e-51
Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 0

Query:    1 IPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKVGG 96
            IPFREK+LWT ITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTS LVMQLLAGSRIIEV+ ++KEDRALFSGAQK+ G
Sbjct:   30 IPFREKLLWTTITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVDYNVKEDRALFSGAQKLFG 125

[Close]

BLAST of mRNA_H-paniculata_contig8530.16502.1 vs. uniprot
Match: B5YLQ8_THAPS (Protein translocase complex subunit n=5 Tax=Bacillariophyta TaxID=2836 RepID=B5YLQ8_THAPS)

HSP 1 Score: 175 bits (444), Expect = 5.720e-51
Identity = 88/96 (91.67%), Postives = 92/96 (95.83%), Query Frame = 0

Query:    1 IPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKVGG 96
            IPFREKVLWT ITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTS LVMQLLAGSRIIEVN ++KEDRALF+GAQK+ G
Sbjct:   24 IPFREKVLWTTITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVNYNVKEDRALFAGAQKLFG 119

[Close]

BLAST of mRNA_H-paniculata_contig8530.16502.1 vs. uniprot
Match: A0A7S4MCE0_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S4MCE0_9STRA)

HSP 1 Score: 175 bits (443), Expect = 7.880e-51
Identity = 88/96 (91.67%), Postives = 91/96 (94.79%), Query Frame = 0

Query:    1 IPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKVGG 96
            IPFREKVLWT ITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTS LVMQLLAGSRIIEVN ++KEDRALF GAQK+ G
Sbjct:   24 IPFREKVLWTTITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVNYNVKEDRALFQGAQKLFG 119

[Close]

BLAST of mRNA_H-paniculata_contig8530.16502.1 vs. uniprot
Match: A0A7S2J237_9DINO (Hypothetical protein (Fragment) n=2 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2J237_9DINO)

HSP 1 Score: 165 bits (418), Expect = 8.870e-51
Identity = 78/96 (81.25%), Postives = 91/96 (94.79%), Query Frame = 0

Query:    1 IPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKVGG 96
            IPFREK+LWT I+LF+FLVCCQIP+YG+ ++KS+DPFYWMRVILASNRGTLMELGISPIVTS +VMQLLAGS+IIEV+QS+KEDR LFSGAQK+ G
Sbjct:   42 IPFREKILWTAISLFVFLVCCQIPLYGISNSKSADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSKIIEVDQSLKEDRVLFSGAQKLFG 137

[Close]

BLAST of mRNA_H-paniculata_contig8530.16502.1 vs. uniprot
Match: A0A6V2TM26_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2TM26_HETAK)

HSP 1 Score: 174 bits (442), Expect = 1.110e-50
Identity = 85/96 (88.54%), Postives = 92/96 (95.83%), Query Frame = 0

Query:    1 IPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKVGG 96
            +PFREK+LWTVITLFIFLVCCQIP+YG+QS KSSDPFYWMRVILASNRGTLMELGISPIVTS LVMQLLAGSRIIEVNQ +KEDRALF+GAQK+ G
Sbjct:   24 VPFREKMLWTVITLFIFLVCCQIPLYGIQSGKSSDPFYWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVNQGVKEDRALFNGAQKLFG 119

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig8530.16502.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig8530.16502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L214_9PHAE	4.380e-54	97.92	Plug_translocon domain-containing protein n=3 Tax=...	[more]
A0A4D9D8Z0_9STRA	4.760e-53	94.79	Plug_translocon domain-containing protein n=2 Tax=...	[more]
A0A7S2SC71_9STRA	7.140e-53	86.46	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A812V906_SYMMI	1.100e-51	88.54	Sec61a protein n=1 Tax=Symbiodinium microadriaticu...	[more]
A0A7S2B8N6_9STRA	1.280e-51	84.38	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A7S1D8Y6_CYCTE	2.660e-51	90.63	Hypothetical protein (Fragment) n=1 Tax=Cyclophora...	[more]
B5YLQ8_THAPS	5.720e-51	91.67	Protein translocase complex subunit n=5 Tax=Bacill...	[more]
A0A7S4MCE0_9STRA	7.880e-51	91.67	Hypothetical protein n=2 Tax=Bacillariophyta TaxID...	[more]
A0A7S2J237_9DINO	8.870e-51	81.25	Hypothetical protein (Fragment) n=2 Tax=Alexandriu...	[more]
A0A6V2TM26_HETAK	1.110e-50	88.54	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023201	SecY domain superfamily	GENE3D	1.10.3370.10		coord: 3..96 e-value: 3.3E-39 score: 136.8
IPR023201	SecY domain superfamily	SUPERFAMILY	103491	Preprotein translocase SecY subunit	coord: 2..94
IPR019561	Translocon Sec61/SecY, plug domain	PFAM	PF10559	Plug_translocon	coord: 15..49 e-value: 1.6E-19 score: 69.4
IPR002208	SecY/SEC61-alpha family	PFAM	PF00344	SecY	coord: 50..94 e-value: 3.9E-8 score: 32.9
IPR002208	SecY/SEC61-alpha family	PANTHER	PTHR10906	SECY/SEC61-ALPHA FAMILY MEMBER	coord: 1..95
None	No IPR available	PANTHER	PTHR10906:SF10	PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 2	coord: 1..95
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..6
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 7..29
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 49..70
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 30..48
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 71..96
None	No IPR available	TMHMM	TMhelix		coord: 7..29
None	No IPR available	TMHMM	TMhelix		coord: 49..71
IPR030659	SecY conserved site	PROSITE	PS00755	SECY_1	coord: 50..69

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig8530	contig	H-paniculata_contig8530:8277..9387 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig8530.16502.1	mRNA_H-paniculata_contig8530.16502.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig8530 8277..9387 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig8530.16502.1 ID=prot_H-paniculata_contig8530.16502.1|Name=mRNA_H-paniculata_contig8530.16502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
IPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGT
LMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKVGG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023201	SecY_dom_sf
IPR019561	Translocon_Sec61/SecY_plug_dom
IPR002208	SecY/SEC61-alpha
IPR030659	SecY_CS