prot_H-paniculata_contig853.16500.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig853.16500.1
Unique Nameprot_H-paniculata_contig853.16500.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length2599
Homology
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BLAST of mRNA_H-paniculata_contig853.16500.1 vs. uniprot
Match: D7FZ31_ECTSI (Viral A-type inclusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ31_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 2.190e-48
Identity = 141/309 (45.63%), Postives = 197/309 (63.75%), Query Frame = 0 
Query:  836 LGRLLKEAQVRAHEKAKQLQDAERSWSDTLSQSKDQTAAQVEERESRLRDVLQELESTK-------EXXXXXXXXXXXXXXXXXXSKARTNELHKLGVDMERELTAMLEDKEVSEASKQAQEQAWRTQSEQSERGLDELQERLREAHRSRAIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELERSSSRLADLQKQHSEGRQVRSHRVSAGVEAASRGMRELRQELARLEEHAEGLSSRLQQRESELSEATTLIEDTRSELTALRNRAKKADEEAEKTVKLSDRVGTAEAAASLLRQELSETRESMT 1137
            LGRLL+EA+ R  EKA+QLQ AERSW + LS+SKD +A  V++RE+RL    Q LE TK       E                  S+ART+ELH LGVDMERELTAML+DKE + A+++  E+ WR ++E+ +  ++ L+ RL EA R++  AE                            E ++RS SR  +LQ++HSEGR        AGVEAASRGM+ELR+EL RLEEH+EGLSSRL+QR+ EL+EA  L+ +T+ +LTALRNR+K+ ++       +S+R+  AEAAA+LL++EL+ETR++++
Sbjct: 1915 LGRLLEEARKRVSEKAQQLQHAERSWDEALSKSKDASATLVQDREARLVQANQGLEDTKKDLELAREEAAAIAAELQREQEALSVSRARTSELHTLGVDMERELTAMLKDKEQAAAARELAEEEWRAKAEERDGQIERLEGRLLEAERAQGEAEDKLEQVSSEACLARERVDQVLEELEDAKEGMQRSDSRAQELQRRHSEGR--------AGVEAASRGMKELRRELNRLEEHSEGLSSRLRQRDQELAEAAALMTETQRDLTALRNRSKEMEQ-------VSERLEAAEAAATLLKEELTETRQAVS 2208
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BLAST of mRNA_H-paniculata_contig853.16500.1 vs. uniprot
Match: A0A6H5KJI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI0_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 4.170e-31
Identity = 98/206 (47.57%), Postives = 134/206 (65.05%), Query Frame = 0 
Query:  784 AAISDGKASALQKELQTTR--------SELVTLEGERDQALKAVGELSSRTDSLEEQLERLGRLLKEAQVRAHEKAKQLQDAERSWSDTLSQSKDQTAAQVEERESRLRDVLQELESTK-------EXXXXXXXXXXXXXXXXXXSKARTNELHKLGVDMERELTAMLEDKEVSEASKQAQEQAWRTQSEQSERGLDELQERLREA 974
            A  +D K SA+Q++L   R        S +  +E ERDQAL+AVG+LS++TDSLEEQLE LGRLL+E++ R  EKA+QLQ AERSW + LS+SKD +A  V++RE+RL    Q+LE TK       E                  S+ART+ELH LGVDMERELTAML+DKE +EA+++  E+ WR ++ + +  ++ L+ RL EA
Sbjct: 1912 ANAADAKLSAIQEQLDKARQRICVVAVSRVAAVEVERDQALEAVGQLSAKTDSLEEQLENLGRLLEESRERVSEKAQQLQHAERSWDEALSKSKDASATLVQDREARLVKANQDLEDTKKDLELAREEAAAIAAELHREQEALSVSRARTSELHTLGVDMERELTAMLKDKEQAEAARELAEEEWRAKAAEKDEQVERLEGRLLEA 2117
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig853.16500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ31_ECTSI2.190e-4845.63Viral A-type inclusion protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KJI0_9PHAE4.170e-3147.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1748..1768
NoneNo IPR availableCOILSCoilCoilcoord: 1378..1398
NoneNo IPR availableCOILSCoilCoilcoord: 1256..1290
NoneNo IPR availableCOILSCoilCoilcoord: 873..921
NoneNo IPR availableCOILSCoilCoilcoord: 791..818
NoneNo IPR availableCOILSCoilCoilcoord: 110..176
NoneNo IPR availableCOILSCoilCoilcoord: 559..593
NoneNo IPR availableCOILSCoilCoilcoord: 1164..1191
NoneNo IPR availableCOILSCoilCoilcoord: 1939..1959
NoneNo IPR availableCOILSCoilCoilcoord: 1042..1111
NoneNo IPR availableCOILSCoilCoilcoord: 1196..1241
NoneNo IPR availableCOILSCoilCoilcoord: 957..1019
NoneNo IPR availableCOILSCoilCoilcoord: 1122..1156
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableCOILSCoilCoilcoord: 510..530
NoneNo IPR availableCOILSCoilCoilcoord: 2055..2152
NoneNo IPR availableCOILSCoilCoilcoord: 619..716
NoneNo IPR availableCOILSCoilCoilcoord: 1406..1426
NoneNo IPR availableCOILSCoilCoilcoord: 1482..1509
NoneNo IPR availableCOILSCoilCoilcoord: 1659..1728
NoneNo IPR availableCOILSCoilCoilcoord: 1329..1363
NoneNo IPR availableCOILSCoilCoilcoord: 1305..1325
NoneNo IPR availableCOILSCoilCoilcoord: 826..860
NoneNo IPR availableCOILSCoilCoilcoord: 352..372
NoneNo IPR availableCOILSCoilCoilcoord: 1513..1547
NoneNo IPR availableCOILSCoilCoilcoord: 1556..1604
NoneNo IPR availableCOILSCoilCoilcoord: 1616..1647
NoneNo IPR availableCOILSCoilCoilcoord: 724..761
NoneNo IPR availableCOILSCoilCoilcoord: 387..425
NoneNo IPR availableCOILSCoilCoilcoord: 429..463
NoneNo IPR availableCOILSCoilCoilcoord: 33..53
NoneNo IPR availableCOILSCoilCoilcoord: 293..341
NoneNo IPR availableCOILSCoilCoilcoord: 181..278
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 1126..2318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig853contigH-paniculata_contig853:450..25477 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig853.16500.1mRNA_H-paniculata_contig853.16500.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig853 450..25477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig853.16500.1 ID=prot_H-paniculata_contig853.16500.1|Name=mRNA_H-paniculata_contig853.16500.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2599bp
VQEEAARVQQARDRAEADLRRVGRQHKEALELKEKAAQDLAETERCRAVL
EREQEALGKDSAEARSLAQALAREKGVLENARKCLDDEAKEVEVRRARLE
EFQETGQAGLEEGRGELRVAAERLEAEKEKLKASRQNLEEEQRKTESEAK
RSEDILEGEKAELQRMRADLDRFSARVGGEKAALRQQTSELEDKEAELVA
REEHIRSLDAKVERAQSECKQASRELEREQKELRAAQERLQAREETLQLE
KASVEEGARELATERRALEAREEAVRDTGREVGLSLDQGRTVLGRERNKL
QEESEKLSKASQALGETLQLKRKLEAERDDIEMCRAQLKERSEALSLRDR
GLEAREAELGSWRQELEGESEEVGRVRGATSDREREVKEREDEADDREER
LLRKEEELEDARVLLESAREDALAETRAAEGAAVEARELRAALEESRKAV
AEKHNKAKGAERAVKAREEALSQWEDVLKGQAKDVTEGTTMLEAERLSQQ
KVLDARSAGLETEERRLEEVSSAMQAREEALTMRETQVKELESAARALEG
GGEARKLEAERLRERLSGLEKSLEAERADLAKRKAEVSEWEEEAHKRLQE
ADEKQRAADRGAREGSKARRELERLKKAVESGFEDLQRQEHGLEKQKEAA
RNILTTAKAAEAEAAEVERKAAQTRGELSRSREEVERMRLELSEAMSQVE
GKQAVLESSKKGLEEEKKLLDRGKREAGAEADQLDQRREALERKEAELYA
AEEASAQKSQELSVSFAEQKGELESSRRRAEEKAAISDGKASALQKELQT
TRSELVTLEGERDQALKAVGELSSRTDSLEEQLERLGRLLKEAQVRAHEK
AKQLQDAERSWSDTLSQSKDQTAAQVEERESRLRDVLQELESTKEQLSQA
SEELKKEREALSQSKARTNELHKLGVDMERELTAMLEDKEVSEASKQAQE
QAWRTQSEQSERGLDELQERLREAHRSRAIAEDRLEQANLEASAARVRAE
EAQEELFGSREELERSSSRLADLQKQHSEGRQVRSHRVSAGVEAASRGMR
ELRQELARLEEHAEGLSSRLQQRESELSEATTLIEDTRSELTALRNRAKK
ADEEAEKTVKLSDRVGTAEAAASLLRQELSETRESMTNIEKELLQARKES
TESESRLRSSARELTAALLDLRQREEDVETLRDELSETNAATSDKFNSMQ
QELRQQSNRARKEAAEWKALAERAEGKLEESERQLALLKQEHEVGARSEA
EARRLTDSLSEKSRGLKDERRALTEERERLSAKATAIEEASAMAKAQEVE
ARAILKKIELRRRRLSEREDGLARREDAIRLKEEQVSTATQDASRATEEA
HGVRREIESLREILLTQERDVTTKARAASAKERENSQKSREITKMQKDSA
QKAREISQREEEISRREAEVSELERKIFQRETGVSEEGRRLFGMTTELEG
RKKDVDEREARQYPLAVLFAAALAHRRFNATAEKLGQDAAHLEQQLEAAQ
ADVHTNRERSKALARAERRVQERERLLEGEQKELDQTREKMSSEASRLAV
SIGGVEERVSSEAKQVQAEKTHLEKQKKRLALLKTELEERRKALEDSEKA
LESRTKHAARKREAEYKAAKSQLGESRKELAREREELASRLRGLGEREQR
RARETAAEAEAAARKGAEAESLMRRAKERERQSLEKENKAADERLELERE
QRALSLQRAALEKEAGALQQQVAALLERRSTAGGPSAETNTNDNTNVLRE
AESRLKLAEQRHRGAEEREAAASELEGALRADRRELSLRESAVSAAEARA
ASRERAARHLEECLKVELAAAAAKQGSAGKPLSSANTAAPSTAADGGAAS
RRTQEWAIGGAQFHFPAVRTGILEATSPSPSLGWDSLDAQVQGRHAMRVE
GVGAGAGTVGQVMPGERERNVEERERHLAEWSKALAEQAEAMGEQAVKLE
AAYDQLRQREEAGDAATADDAPAVVVESQEGASAGKAKEGCGSGVQQGED
DGIREVDERPRQTEDRQVTSSSRTHEAPATSEAEAPIDRSVPVRATETAS
EQALDRHLEQETVRLAEKARELEAERRRLTAASEAANHEHDRAQIEKQEA
SEARKSAAALRLQLEREKAKLEAERGGLAAEKSLLAAERDRLETEKARAL
RETCASNETLRTINANESGRKSTPAFGLPAAVAAERRDHAATAVAPSPVP
LPSVAGSHDVRDAGTSPRDAGAASGTASQVEMSDIFSAQSTSEVVDPLRA
RNDKNGDSNDETKMAEERPRTGLGLDKRQSIKAENMETGRPVPHTNAGSK
ISSGDSVKALVQEMAAELGQQSAPRRNRASHNRSTEPASNNATAASVDGV
NRVSSSRSASPRASGARRRQHQRNASEAQGDKTRANSRRNTRRGGQGGRR
WGSENTRGTAEGVGPSLDSIRRRLHGAATAARGTAQEAVSDTSGDDVEFS
SPVATPVTMVPLLRPGVTVASTVSKTGAAAVHEDPFLAQLHARLAGADHT
LRESLGRRQALINKFGYSGGSGGLSSSLGPSEGEETTSDFPSGSPELTTS
NGSSPADAAVARGTTTSGVERQARRGPGAAESSPESPGIRGRFGFTGRG
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