prot_H-paniculata_contig8528.16497.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8528.16497.1
Unique Nameprot_H-paniculata_contig8528.16497.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length349
Homology
BLAST of mRNA_H-paniculata_contig8528.16497.1 vs. uniprot
Match: A0A6H5K9Z7_9PHAE (Nuclear pore complex protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Z7_9PHAE)

HSP 1 Score: 325 bits (834), Expect = 6.720e-99
Identity = 191/353 (54.11%), Postives = 244/353 (69.12%), Query Frame = 0
Query:    1 MQASLSSLFPGVNTLPTDEQLLQRMERGSPPSSHEAIFEMLDGSAQSRIRAEGQGMYRQAQQALILGESNIPLFLENILRRVVDPGAMGVEEDQRRQEAT------AGQGMSQPALPAFRSAQLLRFAAHLALILGAQCPYLT-MADGTQEAIDDVVCAYAEHLGKTQQVTLVAVYAATLPVSRRRELYARFLRSVEGEASRTQALEEARKHMGSDVSAILKMVVEHARLEIPSIAPR-VPRQVPDGDLKKIHALSWLLGQEDTRSEAVLQANALARHFVLQQYQESVIAALGSGVIAGAGLLPWERSRASSGIEAGGDKDSKAKNASRYDDGESPVILSARVEAVEMLLDTV 345
            +QA+ S+L+PGV++L TDE+LL+RM R  PP+SH AIFE+LD +++ R+RAEG+G+YRQAQQAL+LG  +IPLFL NIL RV   GA G + D   ++        +G   ++  L   RS QLLRFAAHLAL+L AQCPYLT M +GT EA++DVV AYA+HL K QQV LVA+YA+TLP  RRRELYA FLRS+EGE SR +ALE+A+ HM  DV AILK VVE  RL   S+A   +P+QVP+GDLKKI A+SWLL   DT++EAV+QANALARH VLQ YQ+SVI         G                   D+       + YD+ E+P +LSAR+EAV+ LL++V
Sbjct:  525 VQAARSALYPGVSSLRTDERLLERMTRSGPPTSHGAIFEVLDDNSRGRVRAEGKGVYRQAQQALVLGGRDIPLFLRNILWRVAAGGAEGADGDSGAEDGRGVDDGFSGSRRTEDVL--LRSPQLLRFAAHLALVLAAQCPYLTTMEEGTLEAVEDVVHAYAQHLVKAQQVGLVAIYASTLPTRRRRELYAGFLRSLEGEGSRREALEQAKSHMPGDVPAILKKVVEDVRLHTVSVASSAMPKQVPEGDLKKIKAMSWLLDHPDTQAEAVIQANALARHLVLQTYQQSVI---------GXXXXXXXXXXXXXXXXXXXDE-------ADYDESETPTVLSARLEAVQKLLESV 859          
BLAST of mRNA_H-paniculata_contig8528.16497.1 vs. uniprot
Match: D8LFJ1_ECTSI (Nuclear pore complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ1_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 5.700e-45
Identity = 96/170 (56.47%), Postives = 124/170 (72.94%), Query Frame = 0
Query:    1 MQASLSSLFPGVNTLPTDEQLLQRMERGSPPSSHEAIFEMLDGSAQSRIRAEGQGMYRQAQQALILGESNIPLFLENILRRVVDPGA------MGVEEDQRRQEATAGQGMSQPALPAFRSAQLLRFAAHLALILGAQCPYLT-MADGTQEAIDDVVCAYAEHLGKTQQV 163
            +QA+ S+L+PGV++L TDE LL++M R  PP+SH AIFE+LD +++ R+RAEG+G+YRQAQQAL+LG  +IPLFL NIL RV   GA       G EE +   +  +G   ++  L   RS QLLRFAAHLAL+L AQCPYLT M +GT EA++DVV AYA+HL K QQV
Sbjct:  526 VQAARSALYPGVSSLRTDEHLLEQMTRSGPPTSHGAIFEVLDDNSRGRVRAEGKGVYRQAQQALVLGGGDIPLFLRNILWRVAAGGAESADGDSGAEEGRGVDDGFSGSPRAEDML--LRSPQLLRFAAHLALVLAAQCPYLTTMEEGTLEAVEDVVHAYAQHLAKAQQV 693          
BLAST of mRNA_H-paniculata_contig8528.16497.1 vs. uniprot
Match: D8LFJ2_ECTSI (Nuclear pore complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ2_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.210e-29
Identity = 64/104 (61.54%), Postives = 80/104 (76.92%), Query Frame = 0
Query:  161 QQVTLVAVYAATLPVSRRRELYARFLRSVEGEASRTQALEEARKHMGSDVSAILKMVVEHARLEIPSIAPR-VPRQVPDGDLKKIHALSWLLGQEDTRSEAVLQ 263
            QQV LVA+YA+TLP  RRRELYA FLRS+EG+ SR +ALE+A+ HM  DV AILK VVE  RL   S+A   +P+QVP+GDLKKI A+SWLL    T+++AV+Q
Sbjct:   21 QQVGLVAIYASTLPTRRRRELYAGFLRSLEGDGSRREALEQAKSHMPGDVPAILKKVVEDVRLHTVSVASSAMPKQVPEGDLKKIKAMSWLLDHPSTQADAVVQ 124          
BLAST of mRNA_H-paniculata_contig8528.16497.1 vs. uniprot
Match: A0A293M3H1_ORNER (Nuclear pore complex protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M3H1_ORNER)

HSP 1 Score: 80.5 bits (197), Expect = 7.720e-13
Identity = 74/240 (30.83%), Postives = 113/240 (47.08%), Query Frame = 0
Query:   37 IFEMLDGSAQSRIRAEGQGMYRQAQQALILGESNIPLFLENILRRVVDPGAMGVEEDQRRQEATAGQGMSQPALPAFRSAQLLRFAAHLALILGAQCPYLTMADGTQEAIDDVVCAYAEHLGKTQQVTLVAVYAATLPVSRRRELYARFLRS--VEGEASRTQALEEARKHMGSDVSAILKMVVEHARLEIPSIAPRVPRQVPDGDLKKIHALSWLLGQEDTRSEAVLQANALARHFVLQ 274
            +FE L  +  ++++ EG   Y  AQ+ +IL +                    G+ E+ R     +GQ +S+          L+RF AH++L+L +    L+       A + V+  Y + L     V +VA YAA LP   + E YA  L    ++  A + + LE AR   G DV+AI + +VEH R+           +V   D +KI +L WLL   + R EA+ QANAL R FVL+
Sbjct:  450 VFESLSATPNAQVQKEGDLYYSVAQRCIILDD------------------VYGLMEEMRE---WSGQQLSR---------HLVRFMAHMSLVLRSAGYGLS-----DVAFNTVLRTYVKELIHEGGVPVVATYAAALPPEEQVEHYAYMLMELKIQEPAQQERCLEWARD-AGLDVAAITRTLVEHVRMADTEQGTTPSVEVTPEDREKISSLDWLLFDAEMRGEALRQANALMRDFVLR 653          
BLAST of mRNA_H-paniculata_contig8528.16497.1 vs. uniprot
Match: A0A1Z5LE02_ORNMO (Nuclear pore complex protein (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5LE02_ORNMO)

HSP 1 Score: 78.6 bits (192), Expect = 3.310e-12
Identity = 67/166 (40.36%), Postives = 90/166 (54.22%), Query Frame = 0
Query:  115 SAQLLRFAAHLALILGAQCPYLTMADGTQEAIDDVVCAYAEHLGKTQQVTLVAVYAATLPVSRRRELYARFL--RSVEGEASRTQALEEARKHMGSDVSAILKMVVEHARLEI----PSIAPRVPRQVPDGDLKKIHALSWLLGQEDTRSEAVLQANALARHFVLQ 274
            S  L+RF AHLAL+L +    L  A     A + V+ AY + L   + V +VA Y A LP   + E YA  L    V+  A +   LE AR+  G DV AI + +VEH R+      P+ AP +  +V   D +KI +L WLL   D R+EA+ QANAL R FVL+
Sbjct:  491 SRHLVRFMAHLALVLRSAGYALDDA-----AFNAVLRAYVKDLIHEKCVEVVATYVAALPPGEQVEHYAHMLVELKVQDPAQQELCLEWARES-GLDVPAITRTLVEHVRMADTEFEPTSAPSL--EVTPEDYEKISSLDWLLFDVDMRAEALRQANALMRDFVLR 648          
BLAST of mRNA_H-paniculata_contig8528.16497.1 vs. uniprot
Match: A0A067C376_SAPPC (Nuclear pore complex protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C376_SAPPC)

HSP 1 Score: 75.1 bits (183), Expect = 4.770e-11
Identity = 73/249 (29.32%), Postives = 112/249 (44.98%), Query Frame = 0
Query:   32 SSHEAIFEMLDGSAQSRIRAEGQGMYRQAQQALILGESNIPLFLENILRRVVDPGAMGVEEDQRRQEATAGQGMSQPALPAFRSAQLLRFAAHLALILGAQCPYLTMADGTQEAIDDVVCAYAEHLGKTQQVTLVAVYAATLPVSRRRELYARFLRSVEGEASRTQALEEARKHMGSDVSAILKMVVEHARLEIPSIAPRVPRQVPDGDLKKIHALSWLLGQEDTRSEAVLQANALARHFVLQQYQESV 280
            SS E++F  + GSA + +R +    +R+ Q  L+   S + + + +IL R+VD       +D+       G            S QLLRF AH  L +        +  G +     V+ AY  HL + +Q  LVA+YA+ LP   R  +YA+ + +V   A     L          + A +      A + +P  +          D  +I AL  L   E  R+EAV+QAN+LAR+FVLQ  Q S+
Sbjct:  587 SSMESLFADVSGSANATVRDQASHPHRRIQAKLV--SSRVDVIIRDILARLVDT------DDKMLFSWDLGPSTHDV------SPQLLRFGAHFVLFMKTTGEVFDVDAGHK-----VLKAYLRHLVQHKQFKLVALYASQLPEDARAAVYAQCVTAVPSHA----CLAAIAPFCSPPLFAHVTKTAAEAMMTMPHAS----------DADRIGALDILCYDESHRAEAVVQANSLARYFVLQDKQSSL 802          
BLAST of mRNA_H-paniculata_contig8528.16497.1 vs. uniprot
Match: A0A4Y2GFV1_ARAVE (Nuclear pore complex protein n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2GFV1_ARAVE)

HSP 1 Score: 73.2 bits (178), Expect = 1.060e-10
Identity = 59/162 (36.42%), Postives = 86/162 (53.09%), Query Frame = 0
Query:  118 LLRFAAHLALILGAQCPYLTMADGTQEAID-DVVCAYAEHLGKTQQVTLVAVYAATLPVSRRRELYARFLRSVEGEASRTQALEEARKHMGSDVSAILKMVVEHAR-LEIPSIAPRVPRQV--PDGDLKKIHALSWLLGQEDTRSEAVLQANALARHFVLQQ 275
            LLR  AH+ L L        +   T+E +   ++ AY + L K ++ +LVA YA+TLP  ++   YA+FL  V     R + L+ A +  G DV  I K VV++ R  +   I P           DL+KIHA+ WL+     R+EA+ QANAL R FV+Q+
Sbjct:   14 LLRCMAHIILFLRV------IGRSTKEELCVPILEAYVQELIKARKTSLVAPYASTLPKEQQIIWYAKFLEGVTDNNERQKCLQYA-EEAGLDVPQITKTVVKNIREKDAVKIEPTTDLSAVTTQEDLQKIHAIDWLIFNPTQRAEAMKQANALMRVFVVQR 168          
BLAST of mRNA_H-paniculata_contig8528.16497.1 vs. uniprot
Match: A0A3S1C4F2_ELYCH (Nuclear pore complex protein (Fragment) n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1C4F2_ELYCH)

HSP 1 Score: 72.8 bits (177), Expect = 2.080e-10
Identity = 54/164 (32.93%), Postives = 85/164 (51.83%), Query Frame = 0
Query:  118 LLRFAAHLALILGAQCPYLTMADGTQEAIDDVVC-AYAEHLGKTQQVTLVAVYAATLPVSRRRELYARFLRSVEGEASRTQALEEARKHMGSDVSAILKMVVEHARLEIPSIAPRVPRQ-------VPDGDLKKIHALSWLLGQEDTRSEAVLQANALARHFVL 273
            L+R  AH+ L L +      +  G +E + + +  A+ E+L K +   +VA Y ATL  + + + YA FL  +EG   R + L +A +  G DV+ I K VVE  R+      P  P         + + D  +I+A+ WL+  E  RSEA+ QANA+ R F++
Sbjct:  175 LIRLMAHIVLFLRS------IGHGCKEDLCEAILEAFVENLIKNKHRDIVAHYVATLSPAAQVQWYAAFLEEIEGHEERQKYLRKAEEE-GLDVALITKTVVERIRMR--DSGPAFPENSLASDLVITEEDTARINAIDWLIFDEAHRSEALKQANAIMRSFIV 329          
BLAST of mRNA_H-paniculata_contig8528.16497.1 vs. uniprot
Match: A0A2R5LHP0_9ACAR (Nuclear pore complex protein n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LHP0_9ACAR)

HSP 1 Score: 72.8 bits (177), Expect = 2.600e-10
Identity = 71/243 (29.22%), Postives = 110/243 (45.27%), Query Frame = 0
Query:   37 IFEMLDGSAQSRIRAEGQGMYRQAQQALILGESNIPLFLENILRRVVDPGAMGVEEDQRRQEATAGQGMSQPALPAFRSAQLLRFAAHLALILGAQCPYLTMADGTQEAIDDVVCAYAEHLGKTQQVTLVAVYAATLPVSRRRELYARFLRS--VEGEASRTQALEEARKHMGSDVSAILKMVVEHARLEIPSIAPRVPR---QVPDGDLKKIHALSWLLGQEDTRSEAVLQANALARHFVLQ 274
            +FE L  +  ++++ +G+  Y   Q+ +IL ++   +                   ++  + +T  Q           S  L+RF AH+AL L +    L  A     A + V+ AY + L + + V +VA Y A LP   + E YA  L    V+    + + LE AR   G DV AI + +VEH R       P       +V   D +KI +L WLL   + R EA+ QANAL R F+L+
Sbjct:  449 VFESLSATPNAQVQKQGEFYYSVVQRCIILDDTYSLM-------------------EEMHEWSTQQQ-----------SRHLVRFMAHMALALRSAGYALDDA-----AFNAVLRAYVKDLIREKCVPVVATYVAALPPGEQVEHYAYMLEELKVQDSVEQERCLEWARD-AGLDVPAITRTLVEHVRTADAETEPGATTPSLEVTPEDREKISSLDWLLFDVEMRGEALCQANALMRDFILR 655          
BLAST of mRNA_H-paniculata_contig8528.16497.1 vs. uniprot
Match: T0SID6_SAPDV (Nuclear pore complex protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SID6_SAPDV)

HSP 1 Score: 72.4 bits (176), Expect = 3.620e-10
Identity = 73/249 (29.32%), Postives = 112/249 (44.98%), Query Frame = 0
Query:   32 SSHEAIFEMLDGSAQSRIRAEGQGMYRQAQQALILGESNIPLFLENILRRVVDPGAMGVEEDQRRQEATAGQGMSQPALPAFRSAQLLRFAAHLALILGAQCPYLTMADGTQEAIDDVVCAYAEHLGKTQQVTLVAVYAATLPVSRRRELYARFLRSVEGEASRTQALEEARKHMGSDVSAILKMVVEHARLEIPSIAPRVPRQVPDGDLKKIHALSWLLGQEDTRSEAVLQANALARHFVLQQYQESV 280
            SS +A+F  + GSA + +R +    +R+ Q  L+   S + + + +IL  +VD  A     D          G++ P+     S QLLRF AH  L L        +  G +     V+ AY  HL + +   LVA+YA++LP   R  +YA+ +  V   A     L          + A +      AR+ +P+ +          D  +I AL  L   E  R+EAV+QAN LAR FVL+    S+
Sbjct:  586 SSMDALFADVSGSANAVVREQAMHPHRRIQAKLVA--SRVDVIVRDILAGLVDTDAEPFSWDL---------GLNVPSTHR-ASPQLLRFGAHFVLFLQTTGEVFDVNAGHK-----VLKAYLRHLVQHKHFKLVALYASSLPEDARGAVYAQCVTMVPSHA----CLASIAPFCPPPLFAHVAKTAAEARMTMPNAS----------DAMRIGALEILCYDESHRAEAVVQANLLARRFVLEDKHSSL 803          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8528.16497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5K9Z7_9PHAE6.720e-9954.11Nuclear pore complex protein n=1 Tax=Ectocarpus sp... [more]
D8LFJ1_ECTSI5.700e-4556.47Nuclear pore complex protein n=1 Tax=Ectocarpus si... [more]
D8LFJ2_ECTSI1.210e-2961.54Nuclear pore complex protein n=1 Tax=Ectocarpus si... [more]
A0A293M3H1_ORNER7.720e-1330.83Nuclear pore complex protein (Fragment) n=1 Tax=Or... [more]
A0A1Z5LE02_ORNMO3.310e-1240.36Nuclear pore complex protein (Fragment) n=1 Tax=Or... [more]
A0A067C376_SAPPC4.770e-1129.32Nuclear pore complex protein n=1 Tax=Saprolegnia p... [more]
A0A4Y2GFV1_ARAVE1.060e-1036.42Nuclear pore complex protein n=1 Tax=Araneus ventr... [more]
A0A3S1C4F2_ELYCH2.080e-1032.93Nuclear pore complex protein (Fragment) n=1 Tax=El... [more]
A0A2R5LHP0_9ACAR2.600e-1029.22Nuclear pore complex protein n=1 Tax=Ornithodoros ... [more]
T0SID6_SAPDV3.620e-1029.32Nuclear pore complex protein n=1 Tax=Saprolegnia d... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007252Nuclear pore protein 84/107PFAMPF04121Nup84_Nup100coord: 26..275
e-value: 1.5E-37
score: 129.1
IPR007252Nuclear pore protein 84/107PANTHERPTHR13003NUP107-RELATEDcoord: 31..275
NoneNo IPR availableGENE3D1.20.190.50coord: 230..287
e-value: 2.0E-9
score: 39.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8528contigH-paniculata_contig8528:6430..9996 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8528.16497.1mRNA_H-paniculata_contig8528.16497.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8528 1295..10065 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8528.16497.1 ID=prot_H-paniculata_contig8528.16497.1|Name=mRNA_H-paniculata_contig8528.16497.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=349bp
MQASLSSLFPGVNTLPTDEQLLQRMERGSPPSSHEAIFEMLDGSAQSRIR
AEGQGMYRQAQQALILGESNIPLFLENILRRVVDPGAMGVEEDQRRQEAT
AGQGMSQPALPAFRSAQLLRFAAHLALILGAQCPYLTMADGTQEAIDDVV
CAYAEHLGKTQQVTLVAVYAATLPVSRRRELYARFLRSVEGEASRTQALE
EARKHMGSDVSAILKMVVEHARLEIPSIAPRVPRQVPDGDLKKIHALSWL
LGQEDTRSEAVLQANALARHFVLQQYQESVIAALGSGVIAGAGLLPWERS
RASSGIEAGGDKDSKAKNASRYDDGESPVILSARVEAVEMLLDTVPIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007252Nup84/Nup107