prot_H-paniculata_contig8507.16486.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8507.16486.1
Unique Nameprot_H-paniculata_contig8507.16486.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length394
Homology
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BLAST of mRNA_H-paniculata_contig8507.16486.1 vs. uniprot
Match: D7FP63_ECTSI (PsbB mRNA maturation factor Mbb1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP63_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 1.150e-26
Identity = 299/405 (73.83%), Postives = 320/405 (79.01%), Query Frame = 0 
Query:    1 ALTLLNRSVRLNPAHTASWVALGLLNERNRRINEARGCFEKATKSDSRNYYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGPSVVRILQAWAILEASEGNFDDSRKYFGFALARDPYSLPVMXXXXXXXXXXXXXXXXXXXXXXXXXTEPSNPNIWEVYEQAEARGGFPAEATAVHGRGVLAISSASQMGNSSPNAWWDKGVSLID-----------QASRSLTTSSAEMALRVSRIIGGVQWASDYMTFCAINTS-RAGGE-VAFE 392
            ALTLLNRSVR++P HTASWVALGLLNERN+RI+EARGCF+ AT         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    KGP VVRILQ                KYFGFALARD       XXXXXXXXXXXXXXXXXXXX     T+  N +IW VYEQ E R GFP EA AV+ RGV+A+ +    G   P    ++G SL+D           +ASRSL+ SS EMAL VSRIIGGVQWASDYMTF A+N+S + GGE +A+E
Sbjct:  431 ALTLLNRSVRMHPEHTASWVALGLLNERNKRIDEARGCFQTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGNPKGPYVVRILQXXXXXXXXXXXXXXXXKYFGFALARDXXXXXXXXXXXXXXXXXXXXXXXXXXXEIATTTQADNADIWNVYEQVEMRAGFPEEAVAVYQRGVVAVMA----GKKEPPPK-ERGPSLLDPATAXXXXXXXEASRSLSMSSTEMALEVSRIIGGVQWASDYMTFSALNSSSKTGGERMAYE 830
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8507.16486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP63_ECTSI1.150e-2673.83PsbB mRNA maturation factor Mbb1 n=2 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 152..185
e-value: 370.0
score: 1.1
coord: 50..83
e-value: 250.0
score: 2.7
coord: 223..256
e-value: 63.0
score: 8.0
coord: 16..49
e-value: 14.0
score: 13.8
coord: 118..151
e-value: 81.0
score: 7.0
coord: 257..290
e-value: 400.0
score: 0.9
coord: 84..117
e-value: 18.0
score: 12.6
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 132..164
e-value: 31.0
score: 11.8
coord: 237..269
e-value: 530.0
score: 2.8
coord: 271..303
e-value: 13.0
score: 14.7
coord: 64..96
e-value: 17.0
score: 13.7
coord: 166..198
e-value: 1.7
score: 17.7
coord: 30..62
e-value: 61.0
score: 9.6
coord: 200..235
e-value: 480.0
score: 3.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 217..363
e-value: 2.9E-7
score: 31.7
coord: 1..216
e-value: 2.9E-37
score: 130.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 5..220
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 161..346
NoneNo IPR availablePFAMPF14559TPR_19coord: 130..190
e-value: 5.9E-7
score: 29.9
NoneNo IPR availablePANTHERPTHR44917FAMILY NOT NAMEDcoord: 105..257
coord: 225..327
coord: 3..145
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..290
score: 40.689

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8507contigH-paniculata_contig8507:1755..10119 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8507.16486.1mRNA_H-paniculata_contig8507.16486.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8507 1755..10119 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8507.16486.1 ID=prot_H-paniculata_contig8507.16486.1|Name=mRNA_H-paniculata_contig8507.16486.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=394bp
ALTLLNRSVRLNPAHTASWVALGLLNERNRRINEARGCFEKATKSDSRNY
YAWLVWGMLEKRFGSVDVAREKFKTCVRVNPKNAKTYQAWGVLESEEGNF
SLAAELFKAGLQQRSDNTFIMQAWALMETKRGDTAQAISLFKKALITRPR
DGAVWQAYALLMRDTGDIAGARALFKQGVRQAPKHCPTWQAWGMMEWQLG
DVQNARKLFQDGIWESPKGPSVVRILQAWAILEASEGNFDDSRKYFGFAL
ARDPYSLPVMVAWGLMEESLGDIGRARQLFEIAATTEPSNPNIWEVYEQA
EARGGFPAEATAVHGRGVLAISSASQMGNSSPNAWWDKGVSLIDQASRSL
TTSSAEMALRVSRIIGGVQWASDYMTFCAINTSRAGGEVAFEQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR003107HAT
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom