prot_H-paniculata_contig8498.16479.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8498.16479.1
Unique Nameprot_H-paniculata_contig8498.16479.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length311
Homology
BLAST of mRNA_H-paniculata_contig8498.16479.1 vs. uniprot
Match: D7FNT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT9_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 4.140e-47
Identity = 107/202 (52.97%), Postives = 137/202 (67.82%), Query Frame = 0
Query:  117 LPDVAEPESPFSDVVFEEIRTAIKILAARLQREKPLSRDEFERFEAAVAIIVEDALPMQELP--AXXXXXXXXXXXXXXPAALPVSNVASPNL---RRTGDDIDNEGPAWDNKG--YGLPSGTQNTYVLEGMEAMTPEQYQEALRHRVSARARAARESKSYGNIVSNDYLKYLNKNPKSDDEEARQEQE--KLKDHENFRNY 309
            +P VAE  SPFS+ + EE+R AIKILAARLQREKP+SR EFERFE+AV +IVEDALP+Q+LP  A    X   XXX   P  L V+    PN           + EGP WD +   YGLP G +NTY ++ ME M PE+YQ ALR +V  RA++ R++ SYGNIVSN+YLK+L KNPK+ DE+ ++ +E  K K  E+FR+Y
Sbjct:    1 MPQVAE--SPFSESLQEELRVAIKILAARLQREKPMSRQEFERFESAVGVIVEDALPLQKLPSPASPASXEAAXXXAAAPPRLAVTQSPVPNADSXXXXXXXFETEGPEWDAEKVQYGLPMGARNTYDIDDMEKMNPEEYQAALREKVVERAQSVRKTGSYGNIVSNEYLKFLGKNPKTGDEKFKKNEEFVKSKGREDFRSY 200          
BLAST of mRNA_H-paniculata_contig8498.16479.1 vs. uniprot
Match: A0A836C7S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7S9_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.220e-24
Identity = 99/240 (41.25%), Postives = 139/240 (57.92%), Query Frame = 0
Query:   64 SYAERLKAAQAAKAAARVGDQPSGNHSGVMSTPPXXXXXXXXXXXXXXXXXXGLPDVAEPES----PFSDVVFEEIRTAIKILAARLQREKPLSRDEFERFEAAVAIIVEDALPMQELPAXXXXXXXXXXXXXXPAALPVSNVASPNLRRTGDDIDNEGPAWD-NKGYGLPSGTQNTYVLEGMEAMTPEQYQEALRHRVSARARAARESKSYGNIVSNDYLKYLNKNPKSDDEEARQEQE 298
            SY ERLKAAQ AKAA +             + PP       XXX            V+EP S    PF+D + E ++TAI +L+ RL+   PL+R EF+RFE A+  I++DA+P     AXXXXXXXXXXXXXX                  + +++EGPAWD +KGYG+P G +N+Y ++GM+ M+P+ YQ ALR +V  R   AR++ +YGN  +N YL +L+K+P  D +E  + +E
Sbjct:   41 SYMERLKAAQEAKAAKKQ-----------AAAPPAAVAPATXXXVAA---------VSEPLSAAAAPFTDEMQEHLQTAINLLSRRLKSGVPLNRPEFDRFEEAIDAIIKDAVPHLAA-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGMESEGPAWDASKGYGMPVGVRNSYTIDGMDDMSPDDYQAALREKVLKRVTKARKTGNYGNRAANAYLSFLDKSPTWDVKEEAEPEE 259          
BLAST of mRNA_H-paniculata_contig8498.16479.1 vs. uniprot
Match: A0A7S0BY33_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BY33_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.140e-9
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 0
Query:  217 EGPAWDNKG-YGLPSGTQNTYVLEGMEAMTPEQYQEALRHRVSARARAARESKSYGNIVSNDYL 279
            EGPA+  KG  GL SGT+NTYV+EGM+ M+PE+Y+EAL+  +SAR    RE+ ++GN+ S +YL
Sbjct:  143 EGPAYTGKGGMGLASGTKNTYVIEGMDEMSPEEYREALQGSISARQDKRRETGTFGNMSSENYL 206          
BLAST of mRNA_H-paniculata_contig8498.16479.1 vs. uniprot
Match: B7FSQ6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FSQ6_PHATC)

HSP 1 Score: 63.5 bits (153), Expect = 5.380e-8
Identity = 57/178 (32.02%), Postives = 86/178 (48.31%), Query Frame = 0
Query:  116 GLPDVAEPESP--FSDVVFEEIRTAIKILAARLQREKP--LSRDEFERFEAAVA-IIVEDALPMQELPAXXXXXXXXXXXXXXPAALPVSNVASPNLRRTGDDIDNEGPAWDNKG-YGLPSGTQNTYVLEGMEAMTPEQYQEALRHRVSARARAARESKSYGNIVSNDYLKYLNKNPK 287
            G+PD  + E P  F D +  ++++A+  L  R+Q E P  LS  E E  +  ++ +I E      + P                 +   ++V S N       +D EG A+D KG  G P GT NTY++EGME M+ E+Y+ AL   +  R  A R++   GN  + DY+  LN N K
Sbjct:   59 GVPDSVDDEYPKNFEDKLLADMQSALLKLERRVQ-EGPGALSLLEVEELDGELSRVIAEMRANGDQRPIKPKSADPSGDLKSAAPSATATSVGSSNSL-----LDEEGEAYDGKGGMGQPKGTVNTYIIEGMEEMSSEEYRLALERSLIDRQAARRQAGVVGNKSTWDYMSQLNPNDK 230          
BLAST of mRNA_H-paniculata_contig8498.16479.1 vs. uniprot
Match: A0A7S2LK59_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LK59_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.620e-6
Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 0
Query:  215 DNEGPAWDNKGYGLPSGTQNTYVLEGMEAMTPEQYQEALRHRVSARARAARESKS--YGNIVSNDYLKYL 282
            D+EGP +   G GL +GT NTY++ GM+ M+PE+Y+EAL+  VS R    R+++    GN  S+ YL  L
Sbjct:   51 DDEGPEYAGGGMGLAAGTANTYIIPGMDEMSPEEYREALQKSVSDRQEERRKNRGGVVGNRASHQYLDQL 120          
BLAST of mRNA_H-paniculata_contig8498.16479.1 vs. uniprot
Match: A0A7S1UWT3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWT3_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.140e-5
Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = 0
Query:  212 DDIDNEGPAWDNKGYGLPSGTQNTYVLEGMEAMTPEQYQEALRHRVSARARAARESKSYGNIVSNDYLKYL 282
            D  ++EGPA+     G P+GT+NTYV++GM+ M+PE+Y++AL+  V A+ R  R+S   GN  S  Y+  L
Sbjct:  151 DTSNDEGPAYTGT-MGQPAGTRNTYVIDGMDEMSPEEYRQALQQSVVAKQRERRKSGMAGNYGSLSYMNSL 220          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8498.16479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FNT9_ECTSI4.140e-4752.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C7S9_9STRA1.220e-2441.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0BY33_9STRA1.140e-954.69Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
B7FSQ6_PHATC5.380e-832.02Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2LK59_9STRA4.620e-644.29Hypothetical protein (Fragment) n=2 Tax=Leptocylin... [more]
A0A7S1UWT3_9STRA1.140e-543.66Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..310
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8498contigH-paniculata_contig8498:6905..9842 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8498.16479.1mRNA_H-paniculata_contig8498.16479.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8498 6864..10394 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8498.16479.1 ID=prot_H-paniculata_contig8498.16479.1|Name=mRNA_H-paniculata_contig8498.16479.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=311bp
MLFAMRTFSLTTLITVAALLPNVSDGFMLPQAQPLARSSRPILRRVRTTP
TKMQADEGGAKRMSYAERLKAAQAAKAAARVGDQPSGNHSGVMSTPPSAP
PAAAEMNPQEGGGGGGLPDVAEPESPFSDVVFEEIRTAIKILAARLQREK
PLSRDEFERFEAAVAIIVEDALPMQELPAQPAPVAPAATVAAAPAALPVS
NVASPNLRRTGDDIDNEGPAWDNKGYGLPSGTQNTYVLEGMEAMTPEQYQ
EALRHRVSARARAARESKSYGNIVSNDYLKYLNKNPKSDDEEARQEQEKL
KDHENFRNYK*
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