prot_H-paniculata_contig8498.16478.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8498.16478.1
Unique Nameprot_H-paniculata_contig8498.16478.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1006
Homology
BLAST of mRNA_H-paniculata_contig8498.16478.1 vs. uniprot
Match: A0A6H5KX34_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX34_9PHAE)

HSP 1 Score: 712 bits (1837), Expect = 8.680e-241
Identity = 501/891 (56.23%), Postives = 597/891 (67.00%), Query Frame = 0
Query:  165 LDKYGHNLEHELDQNESLSDYVKLKKWLDEVAPQQRCSLGLHTSISTRMGSQFATFFARPECGGFQPYMPTSLHNMVKKVLMKQLQALVEMQNDPIKFSKIAQVQQRDRVLGLKLYYTSITGIELTNEISCSSDSHHCNTRRLAEGGNHTHPAVIRMPPTDLSLYDVIIQVRRECARLGVLPRTGPVHSIDQRCRLLQLKVVDFHRKKMLVYESQRRQQWRANIVPHDAARLKYFSQRHFSECIRNALVAKSRDRVCLLVEAGADSTSELRSGVFPLMTAVLSRSVASIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAARHGRLRIAELLVDRLRQDKLAGEMNSDRALNHRSTVNGGLTPVAIAAIHRNEAMARCLMRLGARPGVKCCKGYTAGDHATRSGWKVFGLWLQETQAFGANGVYTFTDMQAENILRVATARMLRAIAVGTMADNGTADN----------GGDHDQXXXXXXXXXXASML------------------------------SVVAGGLKLQHT------------------ALSNVSNITTVQLGHLRCNHVLTVNVLREGYAAPDTESDAGHTALISAAYRGLTSSVLLLIEEGADPNYRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGFVEVVELLAIAASSGRDAALDWERDRPRREHEESERKKTEEILRNAGG-GEPDAPEADDMHDWVFRVTRPREAVRLAELRQTAREREIEN-QPWSAREENIRRPLTIPMTKQQHQGVRCPKCTLLVPCLHFASIKSLISAFPDGVPEWKWNSRNVNSRGKPRRKVAQQQNIGDDPKVLGEDFRSISWWQSLQQAYRHR 995
            +DKYGHNLE ELD NESL ++  LK WLDEV  QQRC+LGLHT IS   GS+F+TFFARPECGGF+ + P  +HNMVKKVL KQ  AL++MQN+P+ FSKIAQ+ QRDRV GL+          L N+     DSHHC+TRRLAEG NHTHP VIR PPTDLSLYD +IQVRREC RLGV+P TGPVHSID RCRLLQ+KV DFHRK+ML+YESQRRQQWR +I PHDAA LK FS  H SE +R+AL AK  DRVC+L+E+GAD ++ELRSG+FP++ AVL RS+  I+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IA+RHGR  IA+ LV+ LR DK+ G+M + RALNHRS+VN GLTP+AIAAIHRNEAMARCLMRLGA+P VKC +G+ AG+HA ++GW VFGLWLQETQAFG  GVYTF DM AEN LRVA  RML AI+ G   ++ +  N          GG               S                                +V A   +  H                    LS   ++T  QLG +R   +LTV++L EG AAPDTESD+GHTALISAAYRG +SSV  LI+EGAD     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       E+GF ++ +LLAIAA+ G +AA+DWE DR RRE EE ERK  + ++   GG G    PEA D++DW+ RVT+PRE  R+A+ +  + +   +  +P   +  ++      P   QQ    RCPKCTL VPCLHFA  K      PD V EW  N R  + R     K       G++         S++WW++L QA+R R
Sbjct:    1 MDKYGHNLEQELDTNESLLEFATLKTWLDEVVAQQRCALGLHTPISAEQGSKFSTFFARPECGGFRQHTPAKIHNMVKKVLTKQFLALLDMQNNPLNFSKIAQIHQRDRVSGLQDQLMESRRSNLHND----RDSHHCDTRRLAEGSNHTHPVVIRTPPTDLSLYDALIQVRRECVRLGVVPATGPVHSIDHRCRLLQMKVADFHRKQMLIYESQRRQQWRIDIAPHDAALLKNFSHHHRSEHLRHALDAKDMDRVCVLLESGADPSTELRSGLFPMIAAVLKRSIPIIQRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIASRHGRRDIAQFLVETLRADKVVGDMKATRALNHRSSVNRGLTPLAIAAIHRNEAMARCLMRLGAKPAVKCHQGHVAGEHAAKAGWGVFGLWLQETQAFGDRGVYTFADMNAENALRVAEQRMLDAISSGETVEDDSKRNSRTASVASNSGGSRPGPTMTGSSSRQVSSAISGDXXXXXXXXXXXXXXXXXXXXXXXXXXAVSATATEEGHNQTLPEPLPEVLSESARDGGLSGFLDVTQFQLGQIRSKILLTVSILHEGRAAPDTESDSGHTALISAAYRGQSSSVRSLIQEGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGAYAFERGFADLAQLLAIAAADGHEAAVDWELDRFRREEEEKERKLVQHLMDKQGGVGGDGVPEA-DLYDWMIRVTKPRETARIADRKLQSEQGSFDQAEPGKHKNNSV-----SPSRGQQKGRERCPKCTLFVPCLHFAGAK-----LPDEVAEWSVNQRGASRRANAGGKRLVYARSGNE---------SVAWWRTLHQAHRDR 867          
BLAST of mRNA_H-paniculata_contig8498.16478.1 vs. uniprot
Match: A0A836C9T3_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T3_9STRA)

HSP 1 Score: 248 bits (633), Expect = 5.770e-66
Identity = 177/613 (28.87%), Postives = 271/613 (44.21%), Query Frame = 0
Query:  176 LDQNESLSDYVKLKKWLDEVAPQQRCSLGLHTSISTRMGSQFATFFARPECGGFQPYMPTSLHNMVKKVLMKQLQALVEMQNDPIK------FSKIAQVQQRDRVLGLKLYYTSITGIELTNEISCSSDSHHCNTRRLAEGGNHTHPAVIRMPPTDLSLYDVIIQVRRECARLGVLPRTGPVHSIDQRCRLLQLKVVDFHRKKMLVYESQRRQQWRANIVPHDAARLKYFSQRHFSECIRNALVAKSRDRVCLLVEAGADSTSELRSGVFPLMTAVLSRSVA--------------------------SIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAARHGRLRIAELLVDRLRQDKLAGEMNSD----RALNHRSTVNGGLTPVAIAAIHRNEAMARCLMRLGARPGVKCCKGYTAGDHATRSGWKVFGLWLQETQAFGANGVYTFTDMQAENILRVATARMLRAIAVGTMADNGTADNGGDHDQXXXXXXXXXXASMLSVVAGGLKLQHTALSNVSNITTVQLGHLRCNHVLTVNVLREGYAAPDTESDAGHTALISAAYRGLTSSVLLLIEEGADPNYRN 752
            +D N S +D  K+K W+ +V  Q RC LG+H  ++      F +F+  PECGG++ + PT++  M+K  L +Q   LV MQ    K        ++A ++QR++V+ ++  Y S++     +EI C+ D++HCN+RR+ EG NHTH  ++  P  DLS Y+ ++ +  EC  LG+ P TGPV  +D R +LL+ K+   H+++ L   ++R  Q R    P  A  L    +   +E +R A+      RV  LV+ GA    E R G+FPL+ A L+R                             +I                                                        AAR  R    E + + + +   A   ++     R LN R+T  GG+T + +AA  RNE MAR L+R GA  G++   G+TA DHA  +       WL++T+A G  G+YT+ D+QAE  +  A   + +AIA G          GG                      G         S++  +              TV VL EG+A PD E+D G TAL++A Y G  ++V  L+ +G D  Y N
Sbjct:    1 MDINCSTTDAEKMKAWVQQVMEQMRCKLGVHKPLTPHQVRPFTSFYGGPECGGYKAFTPTAVVKMLKSFLSRQFAVLVSMQEAFTKEGPEGWVKRVALMRQREQVMAIQDCYESVSREPFRHEIECTRDTNHCNSRRICEGSNHTHGIIVTPPSIDLSEYNSLVALVEECMSLGLDPVTGPVTGMDHRAKLLREKLAAHHKRQELAAAARRSMQRRDAARPWVAHELWTAGETQLAETLRIAIEGDDMARVVTLVQRGAPPNLENRWGMFPLLAAGLARDTGRAHTRSPRCLPPSLSKYTKSRRCCAGAIAALAQAGANPDHVNWLGMSALMWAARRGDLVTVNALLEAGATPAAQGGAFGTALHAAARANRAAAVEAMCEHVTRAAGAAPGHAAVAVARLLNVRATAAGGVTALMVAARRRNEGMARLLLRRGADLGIRDHHGFTAADHAAAAKHDKLARWLRDTRACGDGGIYTYADLQAERAIAAAEGELAQAIAQG----------GG----------------------GSXXXXXXXRSSMDALPR------------TVRVLAEGHAPPDLETDEGQTALMAACYGGSAAAVEALLSQGCDACYVN 569          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8498.16478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KX34_9PHAE8.680e-24156.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C9T3_9STRA5.770e-6628.87Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 787..817
e-value: 1600.0
score: 3.5
coord: 436..465
e-value: 210.0
score: 10.0
coord: 469..498
e-value: 3.1E-4
score: 30.1
coord: 549..578
e-value: 3.9
score: 16.5
coord: 721..750
e-value: 0.22
score: 20.6
coord: 502..532
e-value: 2.4
score: 17.2
coord: 754..783
e-value: 0.096
score: 21.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 436..468
score: 9.938
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 469..501
score: 10.606
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 721..753
score: 10.659
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 754..786
score: 10.152
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 655..860
e-value: 3.0E-23
score: 84.4
coord: 392..634
e-value: 2.5E-34
score: 120.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 698..808
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 411..597
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 704..784
e-value: 4.5E-8
score: 33.6
coord: 441..525
e-value: 3.4E-13
score: 50.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 422..807
score: 41.088
NoneNo IPR availablePANTHERPTHR24166FAMILY NOT NAMEDcoord: 420..524
NoneNo IPR availablePANTHERPTHR24166:SF48ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 65coord: 418..811
coord: 420..524
NoneNo IPR availablePANTHERPTHR24166FAMILY NOT NAMEDcoord: 418..811
IPR035984Acyl-CoA binding protein superfamilySUPERFAMILY47027Acyl-CoA binding proteincoord: 39..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8498contigH-paniculata_contig8498:2425..6647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8498.16478.1mRNA_H-paniculata_contig8498.16478.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8498 2315..6827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8498.16478.1 ID=prot_H-paniculata_contig8498.16478.1|Name=mRNA_H-paniculata_contig8498.16478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1006bp
MIRVHDRGLQEKNHVDGATRALVQVSGAMGTLPTDPKQLETMFIFCTNNW
RTYSGEKPTGEKLARINAIHRQATWGDHDTAETETYDEVLAAPFQKMVFN
IWRSYKSTPKLTAKRRFIALLCDVDIRLLQIKAYQSKPWGFPTTPKGHQI
CPYSNSKKGCPRPLLDKYGHNLEHELDQNESLSDYVKLKKWLDEVAPQQR
CSLGLHTSISTRMGSQFATFFARPECGGFQPYMPTSLHNMVKKVLMKQLQ
ALVEMQNDPIKFSKIAQVQQRDRVLGLKLYYTSITGIELTNEISCSSDSH
HCNTRRLAEGGNHTHPAVIRMPPTDLSLYDVIIQVRRECARLGVLPRTGP
VHSIDQRCRLLQLKVVDFHRKKMLVYESQRRQQWRANIVPHDAARLKYFS
QRHFSECIRNALVAKSRDRVCLLVEAGADSTSELRSGVFPLMTAVLSRSV
ASIRALLAAGADVDRSNSRGMTALMWAIKRDDYAMVDVLLEEGADIGVEG
CTGWTAMSIAARHGRLRIAELLVDRLRQDKLAGEMNSDRALNHRSTVNGG
LTPVAIAAIHRNEAMARCLMRLGARPGVKCCKGYTAGDHATRSGWKVFGL
WLQETQAFGANGVYTFTDMQAENILRVATARMLRAIAVGTMADNGTADNG
GDHDQQQQQQIILRRASMLSVVAGGLKLQHTALSNVSNITTVQLGHLRCN
HVLTVNVLREGYAAPDTESDAGHTALISAAYRGLTSSVLLLIEEGADPNY
RNRNDRTALMAASAQGHLKVILALLTVGADATVIDIDGKSAGAYAFEKGF
VEVVELLAIAASSGRDAALDWERDRPRREHEESERKKTEEILRNAGGGEP
DAPEADDMHDWVFRVTRPREAVRLAELRQTAREREIENQPWSAREENIRR
PLTIPMTKQQHQGVRCPKCTLLVPCLHFASIKSLISAFPDGVPEWKWNSR
NVNSRGKPRRKVAQQQNIGDDPKVLGEDFRSISWWQSLQQAYRHRNSQQL
SSGFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR035984Acyl-CoA-binding_sf