prot_H-paniculata_contig8498.16477.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8498.16477.1
Unique Nameprot_H-paniculata_contig8498.16477.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length263
Homology
BLAST of mRNA_H-paniculata_contig8498.16477.1 vs. uniprot
Match: D7FNU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU3_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 2.410e-54
Identity = 134/249 (53.82%), Postives = 166/249 (66.67%), Query Frame = 0
Query:    1 MSCITVP--KQWTGATAAAPRVEA----VLPTAV-VRRRITKK-----VRATPQLVDSVREVVQAFEFEYAQTRADSVMLKTMLDERRTQLSDLRRHLEKESSENGTLEAVVQHRNTKNEKGDVRLAALEHDFALVVESDKIIAAKASAFESDMVVAVQEHRRIREMTSKGALQLDCAGAALDERERVFMADLRENERLRAEVERGRKDVDKKQCLVRSKQEKAVMARSLAKEAKAELEDLSRETDGLR 237
            MS ITVP  K W G +AA+ RVE+    V+P A  ++RR  KK      RAT  LVDSVREVVQAFE EY+Q RA+SV LK +LD+ RTQLSDLRRHLEKESSENGTLEAVVQHR  +N  GD RL  LE  F  V+  +  IA+ A+A ESD+VV   EH+RIR+ T+  A  LD A A L +RER   A   E++RL A VE GR+ V  ++ L+R +QE+A  +R+LA EA  + + L  E  GLR
Sbjct:    1 MSSITVPTTKTW-GRSAASSRVESAVVPVMPAATPIQRRTAKKSKNSNARATVHLVDSVREVVQAFELEYSQARAESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARNTAGDARLRELEAAFKQVLADEGHIASSAAALESDLVVFTAEHKRIRDKTATAASWLDLAQAGLLQRERTLAAAQSESDRLTAAVEAGRRAVADREGLLRGEQERASRSRALAGEAADDAKALESEVAGLR 248          
BLAST of mRNA_H-paniculata_contig8498.16477.1 vs. uniprot
Match: A0A6H5KW75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW75_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 3.080e-40
Identity = 120/271 (44.28%), Postives = 153/271 (56.46%), Query Frame = 0
Query:    1 MSCITVPKQ--WTGATAAAPRVEAVLPTAV-VRRRITKK-----VRATPQLVDSVREVVQAFEFEYAQTRADSVMLKTMLDERRTQLSDLRRHLEKESSENGTLEAVVQHRNTKNEKGDVRLAALEHDFALVVESDKIIAAKASAFESDMVVAVQEHRRIREMTSKGALQLDCAGAALDERERVFMADLRENERLRAEVERGRKDVDKKQCLVRSKQEKAVMARSLAKEAKAELEDLSRETDGLRDRVVGKDSECNEAVVRAGAIKREETE 263
            MS ITVPK   W  ++     V  V+P A  ++RR  KK      RAT  LVDS R              A+SV LK +LD+ RTQLSDLRRHLEKESSENGTLEAVVQHR  +N  GD  L  LE  F  V+  +  IA++A+A ESD+VV   EH+ IR  T+  A  LD A A L +RER       E++RL A VE GR+ V  ++ L+R +QE++  +R+LA EA  E + L  E  GLR  +  K+ E         AIK+   E
Sbjct:    1 MSSITVPKTKTWGISSRVESAVVPVMPAATPIQRRTAKKSKISNARATVHLVDSAR--------------AESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARNAAGDASLRELEAMFKQVLADEGHIASRAAALESDLVVFTAEHKCIRNKTATAASWLDLAQAGLLQRERAIAEAQSESDRLTAAVEAGRRTVADREALLRGEQERSSRSRALAGEAADEAKALESEVAGLRRDLARKEEEGXXXXDTLAAIKKHTAE 257          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8498.16477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNU3_ECTSI2.410e-5453.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW75_9PHAE3.080e-4044.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 212..239
NoneNo IPR availableCOILSCoilCoilcoord: 72..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8498contigH-paniculata_contig8498:775..1563 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8498.16477.1mRNA_H-paniculata_contig8498.16477.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8498 775..1563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8498.16477.1 ID=prot_H-paniculata_contig8498.16477.1|Name=mRNA_H-paniculata_contig8498.16477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp
MSCITVPKQWTGATAAAPRVEAVLPTAVVRRRITKKVRATPQLVDSVREV
VQAFEFEYAQTRADSVMLKTMLDERRTQLSDLRRHLEKESSENGTLEAVV
QHRNTKNEKGDVRLAALEHDFALVVESDKIIAAKASAFESDMVVAVQEHR
RIREMTSKGALQLDCAGAALDERERVFMADLRENERLRAEVERGRKDVDK
KQCLVRSKQEKAVMARSLAKEAKAELEDLSRETDGLRDRVVGKDSECNEA
VVRAGAIKREETE
back to top