prot_H-paniculata_contig846.16454.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig846.16454.1
Unique Nameprot_H-paniculata_contig846.16454.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length868
Homology
BLAST of mRNA_H-paniculata_contig846.16454.1 vs. uniprot
Match: D8LHK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHK8_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 2.630e-52
Identity = 179/542 (33.03%), Postives = 243/542 (44.83%), Query Frame = 0
Query:  281 GVGGGTNDGGGYGRGVQVLPASEIWFAHRKYRVVVCLDLSTSVFAQRWGEMPADSFVDATMMYIEGIVAPAISSK----SCSSDSSGC-VGEEVYVSVIAYASQLDEVWNLVQGYPLWQGAAEDGKELQQLRSILKDKMRTAENRL---CDKLVPPVVTAPSARGGQRGHDDHETASVSFSNPIHHDNISKIGG---------------------------------------------------------------------------KKKSQVEGMVEAIILALKFMPLDAAPLAVLVTDGCESHPPHTRYDGVKMRLCRYDVVVSCVLIDGSG---------------------AAKTLSNGARGSKGWRSRRRRGSSSLGSSNFVSSSSLSPSSIICNP----FEPLDKCLVPSSTGLAHMAAVTGGWFYTLETLRAALDDGGHRVGGAAAAVSGIG----GVGKKRGVRMAAAAKMGPSAGQSVFPGSGEGDGPSEALCQPDRALNPSLFQRRALFRASPLGLHTSRKRLRRHTPNI 710
            G GGGT    G    ++V   S +WFAHRKYR+VVCLDLSTS+   RW  +P + FV+ TM YI+ +VAP   ++    +  S SS   + EEVYVSVIAY+ +LD VW L+QG+ L  GA EDG+ L  LR++L   +   ENR    CD+       A +AR     +D      +   +P H   ++ + G                                                                           ++K+Q++GM +AI+LALKF+PLDAAP+A++VTDG   +P  T YDG+ MRLCR+DV VSC+L+D  G                     +   L +G RG+          +++ G    +         I   P    +    K  VP  +GLAH+  VTGGW + LETL A L                 G    G   +  VR   AAK    +G S       G GPS ALCQ  R +  S  QR+ALFRASPL + TSR+ L  H P +
Sbjct:  228 GSGGGT----GASSPLEVSSRSVLWFAHRKYRLVVCLDLSTSMCTGRWWGIPVELFVNNTMKYIQALVAPITDARQQQGAAQSPSSRMGIAEEVYVSVIAYSIELDVVWCLIQGFLLHGGAEEDGRSLDSLRALLTKALHGVENRFETECDR-------AEAARRHSMIYD----GDIVIPSPGHGHRLTPVPGVAATASRESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRQQSRQKTQLDGMADAIVLALKFLPLDAAPIALVVTDGLVDYPSPTEYDGLSMRLCRHDVAVSCLLMDRMGERADVGVXXXXXXXXXATTASSVAVLPSGNRGATAVGRWLPAAAAAGGVGGAMGRYETDRVDISFAPHGEAYAAARKHRVPDLSGLAHLVGVTGGWLFDLETLEAELAAXXXXXXXXXXXXXXRGIPIPGTDGRAAVREDGAAKE--ESGGSEDGTMSCGGGPSAALCQAGRPVAASPLQRKALFRASPLSVETSRQLLSSHNPAL 752          
BLAST of mRNA_H-paniculata_contig846.16454.1 vs. uniprot
Match: A0A6H5KTQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTQ7_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 5.990e-52
Identity = 203/661 (30.71%), Postives = 284/661 (42.97%), Query Frame = 0
Query:  281 GVGGGTNDGGGYGRGVQVLPASEIWFAHRKYRVVVCLDLSTSVFAQRWGEMPADSFVDATMMYIEGIVAPAISSK----SCSSDSSGC-VGEEVYVSVIAYASQLDEVWNLVQGYPLWQGAAEDGKELQQLRSILKDKMRTAENRL---CDKLVPP---------VVTAPSARGGQRGHDDHETASVSFSN-----------------------------PIHHDNISKIG----------------------GKKKSQVEGMVEAIILALKFMPLDAAPLAVLVTDGCESHPPHTRYDGVKMRLCRYDVVVSCVLIDGSG----------------------AAKTLSNGARGSKGWRSRRRRGSSSLGSSNFVSSSSLSPSSIICNP----FEPLDKCLVPSSTGLAHMAAVTGGWFYTLETLRAALDDGGHRVGGAAAAVSGIGGVGKKRGVRM------AAAAKMGPSAGQSVFPGSGE---GDGPSEALCQPDRALNPSLFQRRALFRASPLGLHTSRKRLRRHTPNIGMPYPQSQPPL-----------------PTPVGNGGSTCSTTFGPAVGSVGTSPEAVSPELGAAVAAXXXXASIRTGGAAVGENTTATKVVSTPHEIDRSWRIENISLQNLIEMRCSEGFRAVELVVK 821
            GV  G+  G G    ++V   S +WFAHRKYR+VVCLDLSTS+   RW  +P + FV  TM YI+ +VAP   ++    +  S SS   + EEV+VSVIAY+ +LD VW L+QG+ L  GA  DG+ L +LR +L   +   ENR    CD              +VT  S  G +        A+ S  +                             P+    +S                         G++K+Q++GM +AI+LALKF+PLDAAP+A++VTDG   +P  T YDG+ MRLCR+DV VSC+L+D  G                      +   L +G RG+          +++ G    +         I   P    +    K  VP  +GLAH+  VTGGW + LETL A L         A             RG+ +      AAA + G +  +S   G G    G GPS ALCQ  R +  S  QR+ALFRASPL + TSR  L  H P +   Y +  P                                           S    SP+ GA +       S +    + GE    TK   T    +  W ++  +L  ++EMRCSEGFR +++ ++
Sbjct:  220 GVAMGSGXGTGASSALEVSSRSALWFAHRKYRLVVCLDLSTSMCTGRWWGIPVELFVKNTMKYIQALVAPITDARQQQGAAQSPSSRMGIAEEVHVSVIAYSIELDVVWCLIQGFLLRGGAEGDGRSLGRLRVLLTKALHGVENRFETECDLAEAARRHSIYEGDIVTPCSGHGHRPTPAPGVAATASRESAXXXXXXXXXXXXXXXXXXXXXXXXXAFPPLPEVPLSTTSXXXXXXXXXXXXXXXXXXPRQQGRQKTQLDGMADAIVLALKFLPLDAAPIALVVTDGLVDYPSPTEYDGLSMRLCRHDVAVSCLLMDRMGERADVGVGGGVXXXXXXXXXXSSVAVLPSGNRGATAVGRWLPAAAAAGGVGGAIGRYETDRVDISFAPHGEAYAAARKHRVPDLSGLAHLVGVTGGWLFDLETLEAEL--------AAXXXXXXXXXXXXXRGIPIPGTDGRAAAREDGAAKEESGGSGDGTMSWGGGPSAALCQAGRPVAASPLQRKALFRASPLSVETSRHLLSSHNPAL---YTRKAPAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSAGTSPDEGAGLLEAMDSVS-QVSAPSAGEMAEMTKRSMTILR-EHDWSLDPANLSRVLEMRCSEGFRLLDVEIR 867          
BLAST of mRNA_H-paniculata_contig846.16454.1 vs. uniprot
Match: A0A836C7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7M7_9STRA)

HSP 1 Score: 146 bits (368), Expect = 7.690e-32
Identity = 104/321 (32.40%), Postives = 145/321 (45.17%), Query Frame = 0
Query:  298 VLPASEIWFAHRKYRVVVCLDLSTSVFAQRWGEMPADSFVDATMMYIEGIVAPAISSKSCSSDSSGCVGEEVYVSVIAYASQLDEVWNLVQGYPLWQGAAEDG--KELQQLRSILKDKMRTAENRLCDKLVPPVVTAPSARGGQRGHDDHETASVSFSNPIHHDNISKIGGKKKSQVEGMVEAIILALKFMPLDAAPLAVLVTDGCESHPPHTRYDGVKMRLCRYDVVVSCVLIDGSGAAKTLSNGARGSKGWRSRRRRGSSSLGSSNFVSSSSLSPSSII-CNPFEPLDKCLVPSSTGLAHMAAVTGGWFYTLETLRAAL 615
            ++P S++WF   KYR+V  LDLSTS+ AQ    +P D         I G+V P +             G +VY+SV+AYA+QLDE W+L+QGY +  G  +      L  L ++L+  +  AEN+LC  L      A + RGG                            +  + VE +++A   ALKF+P DAAPLAV++TDG    P    YD + M+LCR+D  V C+ +    AA   ++ A                             P S++ C PF       VP   GLAHM   TGG +  LE L  AL
Sbjct:  154 IVPGSQLWFVFAKYRIVFALDLSTSMLAQNHWALPIDLLASTITTCIRGLVHPPMQGGG----GGHRPGLQVYISVVAYAAQLDETWSLLQGYQIDVGGGQQAVAAALADLSALLQQAILAAENKLCRAL------AQAGRGGG-------------------------AAQCATHVEDVLQAAAFALKFLPFDAAPLAVVLTDGVGERPSSCAYDSLLMQLCRHDTPVHCIQVGACFAATAPASPA----------------------------DPQSVMPCLPFG-----FVPDVEGLAHMCFTTGGEYLDLEALEHAL 406          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig846.16454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHK8_ECTSI2.630e-5233.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTQ7_9PHAE5.990e-5230.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C7M7_9STRA7.690e-3232.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 400..420
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..868
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig846contigH-paniculata_contig846:12048..30039 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig846.16454.1mRNA_H-paniculata_contig846.16454.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig846 12046..30039 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig846.16454.1 ID=prot_H-paniculata_contig846.16454.1|Name=mRNA_H-paniculata_contig846.16454.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=868bp
ALQIVCAGYVGCCISPTMAEITRSPTRSSSKNTIMPLSGCGGGEDSTRQV
VKECIILVHDASRFAVNERTVWHLNRIYSRPIQLRMSLTRPATNHVGLSS
VSSSSTPGQSSSPQSRAAACDIGPDLTMVDLLLTSVESPQQQQQQQQQQL
PGSGGGGYGNRRSSSQKLQRSLTRSPTTSGSSGGGGDRKMYAAFGRGGGS
GGGDSCPGTPQSSGGAGSRSSAESYPDAPKRSSSSGNIARSCVDGDGTAN
ADSGEASNASSTAAVAPTAAKTGRARAAEHGVGGGTNDGGGYGRGVQVLP
ASEIWFAHRKYRVVVCLDLSTSVFAQRWGEMPADSFVDATMMYIEGIVAP
AISSKSCSSDSSGCVGEEVYVSVIAYASQLDEVWNLVQGYPLWQGAAEDG
KELQQLRSILKDKMRTAENRLCDKLVPPVVTAPSARGGQRGHDDHETASV
SFSNPIHHDNISKIGGKKKSQVEGMVEAIILALKFMPLDAAPLAVLVTDG
CESHPPHTRYDGVKMRLCRYDVVVSCVLIDGSGAAKTLSNGARGSKGWRS
RRRRGSSSLGSSNFVSSSSLSPSSIICNPFEPLDKCLVPSSTGLAHMAAV
TGGWFYTLETLRAALDDGGHRVGGAAAAVSGIGGVGKKRGVRMAAAAKMG
PSAGQSVFPGSGEGDGPSEALCQPDRALNPSLFQRRALFRASPLGLHTSR
KRLRRHTPNIGMPYPQSQPPLPTPVGNGGSTCSTTFGPAVGSVGTSPEAV
SPELGAAVAAAAAAASIRTGGAAVGENTTATKVVSTPHEIDRSWRIENIS
LQNLIEMRCSEGFRAVELVVKQPQLSSSSSAGAGGGGGGTPGFAIGSVAG
GVMGEGDSKRVKRGSPAV
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