prot_H-paniculata_contig8371.16384.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8371.16384.1
Unique Nameprot_H-paniculata_contig8371.16384.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length143
Homology
[Close]
BLAST of mRNA_H-paniculata_contig8371.16384.1 vs. uniprot
Match: D7FN13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN13_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 3.670e-10
Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 0 
Query:   11 RVHLKMTITIAEASLSETGRARVRAWEHFHLGHAHRVGEKLDQLGCLAFCNPSQ 64
            ++HLK  + +AEASL ETGR R+RAWE  H G AH+V    + LG LA+C+PS+
Sbjct:  569 KLHLKFPVILAEASLDETGRPRLRAWEQSHAGFAHKVAVDAEVLGLLAYCDPSE 622
[Close]
BLAST of mRNA_H-paniculata_contig8371.16384.1 vs. uniprot
Match: A0A6H5KCT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT0_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 2.380e-9
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0 
Query:   11 RVHLKMTITIAEASLSETGRARVRAWEHFHLGHAHRVGEKLDQLGCLAFCNPSQ 64
            ++HLK  + +AEASL ETGR R+RAWE  H G AH+V    + LG L +C+PS+
Sbjct:  715 KLHLKFPVILAEASLDETGRPRLRAWEQSHAGLAHKVAVDAEVLGLLGYCDPSE 768
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8371.16384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FN13_ECTSI3.670e-1053.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCT0_9PHAE2.380e-951.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8371contigH-paniculata_contig8371:3174..5854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8371.16384.1mRNA_H-paniculata_contig8371.16384.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8371 3069..6007 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8371.16384.1 ID=prot_H-paniculata_contig8371.16384.1|Name=mRNA_H-paniculata_contig8371.16384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp
MVVPGRSLGQRVHLKMTITIAEASLSETGRARVRAWEHFHLGHAHRVGEK
LDQLGCLAFCNPSQVVFLSLSWTPIQHATSPPWARILFITSSAGTLPTSG
TKEVSMLHPPPPRIITTPTRTSILKKVWKTARALSASKAPGA*
back to top