prot_H-paniculata_contig8365.16379.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8365.16379.1
Unique Nameprot_H-paniculata_contig8365.16379.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length106
Homology
BLAST of mRNA_H-paniculata_contig8365.16379.1 vs. uniprot
Match: D8LI54_ECTSI (USP domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI54_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 4.450e-14
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0
Query:   56 RFVGLSNQGATCYMNSLLQTLYMTPEFRAALYAWKH 91
            RFVGLSNQGATCYMNSLLQTLYMTPEFR+ALY WKH
Sbjct:   84 RFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKH 119          
BLAST of mRNA_H-paniculata_contig8365.16379.1 vs. uniprot
Match: A0A7S2RKP4_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKP4_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.170e-11
Identity = 30/39 (76.92%), Postives = 37/39 (94.87%), Query Frame = 0
Query:   57 FVGLSNQGATCYMNSLLQTLYMTPEFRAALYAWKHEEPR 95
            F GLSNQGATCY+NSLLQ+LYMTPEFRAALY+W+++E +
Sbjct:   62 FRGLSNQGATCYLNSLLQSLYMTPEFRAALYSWQYDEAK 100          
BLAST of mRNA_H-paniculata_contig8365.16379.1 vs. uniprot
Match: A0A0G4GQ90_VITBC (USP domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GQ90_VITBC)

HSP 1 Score: 69.7 bits (169), Expect = 1.210e-11
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0
Query:   57 FVGLSNQGATCYMNSLLQTLYMTPEFRAALYAWKHEE 93
            +VGLSNQGATCYMNSLLQTLYMTPEFR  +YAW + E
Sbjct:   49 YVGLSNQGATCYMNSLLQTLYMTPEFRTGIYAWNYNE 85          
BLAST of mRNA_H-paniculata_contig8365.16379.1 vs. uniprot
Match: A0A7S3IYX4_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3IYX4_9SPIT)

HSP 1 Score: 64.7 bits (156), Expect = 2.220e-11
Identity = 26/38 (68.42%), Postives = 34/38 (89.47%), Query Frame = 0
Query:   56 RFVGLSNQGATCYMNSLLQTLYMTPEFRAALYAWKHEE 93
            ++ GL NQGATCY+NSL+QTLYMTPEFR+ LY+W ++E
Sbjct:   25 KYKGLQNQGATCYLNSLMQTLYMTPEFRSILYSWSYKE 62          
BLAST of mRNA_H-paniculata_contig8365.16379.1 vs. uniprot
Match: A0A2P6NLB9_9EUKA (Ubiquitin carboxyl-terminal hydrolase 47 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NLB9_9EUKA)

HSP 1 Score: 68.9 bits (167), Expect = 2.250e-11
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 0
Query:   57 FVGLSNQGATCYMNSLLQTLYMTPEFRAALYAW 89
            +VGLSNQGATCYMNSL+QTLYMTPEFRAALY W
Sbjct: 1064 YVGLSNQGATCYMNSLIQTLYMTPEFRAALYKW 1096          
BLAST of mRNA_H-paniculata_contig8365.16379.1 vs. uniprot
Match: A0A1R2BIN5_9CILI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BIN5_9CILI)

HSP 1 Score: 68.2 bits (165), Expect = 4.070e-11
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0
Query:   57 FVGLSNQGATCYMNSLLQTLYMTPEFRAALYAWKHE 92
            FVGLSNQGATCYMNSLLQTLYMTPEFR  +Y W +E
Sbjct:   12 FVGLSNQGATCYMNSLLQTLYMTPEFRREIYKWTYE 47          
BLAST of mRNA_H-paniculata_contig8365.16379.1 vs. uniprot
Match: A0A1R2BW28_9CILI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BW28_9CILI)

HSP 1 Score: 68.2 bits (165), Expect = 4.070e-11
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0
Query:   57 FVGLSNQGATCYMNSLLQTLYMTPEFRAALYAWKHE 92
            FVGLSNQGATCYMNSLLQTLYMTPEFR  +Y W +E
Sbjct:   12 FVGLSNQGATCYMNSLLQTLYMTPEFRREIYKWTYE 47          
BLAST of mRNA_H-paniculata_contig8365.16379.1 vs. uniprot
Match: A0A1R2ANJ0_9CILI (USP domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2ANJ0_9CILI)

HSP 1 Score: 68.2 bits (165), Expect = 4.090e-11
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0
Query:   55 RRFVGLSNQGATCYMNSLLQTLYMTPEFRAALYAWKHEEPRSNRSEKV 102
            ++F GLSNQGATCYMNSLLQ+LYMTPEFR  +Y WK++ PR +  +K 
Sbjct:   20 QKFTGLSNQGATCYMNSLLQSLYMTPEFRQKIYNWKYD-PRKHGDKKT 66          
BLAST of mRNA_H-paniculata_contig8365.16379.1 vs. uniprot
Match: A0A8E0VKB1_9TREM (Ubiquitin carboxyl-terminal hydrolase 47 n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0VKB1_9TREM)

HSP 1 Score: 67.8 bits (164), Expect = 5.260e-11
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0
Query:   57 FVGLSNQGATCYMNSLLQTLYMTPEFRAALYAWKHEEPR 95
            FVGL N G TCYMNSLLQTL+MTPEFR AL+ WK E+PR
Sbjct:   38 FVGLMNSGMTCYMNSLLQTLFMTPEFRNALFQWKFEDPR 76          
BLAST of mRNA_H-paniculata_contig8365.16379.1 vs. uniprot
Match: A0A7S1KS34_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KS34_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 7.680e-11
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0
Query:   55 RRFVGLSNQGATCYMNSLLQTLYMTPEFRAALYAWKHEE 93
            R FVGLSNQGATCY+NSL+Q+LYMTPE R ALY W++ E
Sbjct:   85 RNFVGLSNQGATCYLNSLIQSLYMTPEIRNALYKWRYNE 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8365.16379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI54_ECTSI4.450e-1494.44USP domain-containing protein (Fragment) n=2 Tax=E... [more]
A0A7S2RKP4_9STRA1.170e-1176.92Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
A0A0G4GQ90_VITBC1.210e-1181.08USP domain-containing protein n=3 Tax=Vitrella bra... [more]
A0A7S3IYX4_9SPIT2.220e-1168.42Hypothetical protein (Fragment) n=1 Tax=Euplotes h... [more]
A0A2P6NLB9_9EUKA2.250e-1190.91Ubiquitin carboxyl-terminal hydrolase 47 n=1 Tax=P... [more]
A0A1R2BIN5_9CILI4.070e-1183.33Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Sten... [more]
A0A1R2BW28_9CILI4.070e-1183.33Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Sten... [more]
A0A1R2ANJ0_9CILI4.090e-1164.58USP domain-containing protein n=1 Tax=Stentor coer... [more]
A0A8E0VKB1_9TREM5.260e-1176.92Ubiquitin carboxyl-terminal hydrolase 47 n=1 Tax=F... [more]
A0A7S1KS34_9EUKA7.680e-1174.36Hypothetical protein n=1 Tax=Percolomonas cosmopol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 49..104
e-value: 2.3E-15
score: 58.2
NoneNo IPR availablePANTHERPTHR24006:SF702UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 47coord: 46..95
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 46..95
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 58..99
e-value: 9.7E-11
score: 41.6
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 59..74
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 58..106
score: 11.607
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 56..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8365contigH-paniculata_contig8365:6998..8235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8365.16379.1mRNA_H-paniculata_contig8365.16379.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8365 4055..8235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8365.16379.1 ID=prot_H-paniculata_contig8365.16379.1|Name=mRNA_H-paniculata_contig8365.16379.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp
MNDPAGCTALVLYSGDGSSAEAQSDVSGAGADVAVAAAADVLQPESKPEP
EPEPRRFVGLSNQGATCYMNSLLQTLYMTPEFRAALYAWKHEEPRSNRSE
KVGSNE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf