prot_H-paniculata_contig8360.16378.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8360.16378.1
Unique Nameprot_H-paniculata_contig8360.16378.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length82
Homology
BLAST of mRNA_H-paniculata_contig8360.16378.1 vs. uniprot
Match: D7FWN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN9_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 9.770e-41
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0
Query:    8 QVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPK 80
            +VKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAP+
Sbjct:   55 KVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPR 127          
BLAST of mRNA_H-paniculata_contig8360.16378.1 vs. uniprot
Match: A0A836C863_9STRA (Surp module-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C863_9STRA)

HSP 1 Score: 123 bits (309), Expect = 4.390e-32
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0
Query:    8 QVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAP 79
            +VKGII PPP+IRAI DKTARFVAKNGKSFE+RI  SEEG+SAKFNFMRPHDPYYAYYE+KIR+ EE  D P
Sbjct:   40 KVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTP 111          
BLAST of mRNA_H-paniculata_contig8360.16378.1 vs. uniprot
Match: A0A7S2XZ85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ85_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.930e-31
Identity = 54/74 (72.97%), Postives = 63/74 (85.14%), Query Frame = 0
Query:    1 ILNQIAPQVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEE 74
            I   +  +V GIIYPPPDIR++VDKTA FVA+NGKSFE+RI AS EGKSAKFNFMRPHDPY AYYE +I++FEE
Sbjct:   29 ISGAVQGKVTGIIYPPPDIRSVVDKTAEFVARNGKSFEQRILASGEGKSAKFNFMRPHDPYNAYYELRIKEFEE 102          
BLAST of mRNA_H-paniculata_contig8360.16378.1 vs. uniprot
Match: A0A7S3XR42_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR42_HETAK)

HSP 1 Score: 114 bits (285), Expect = 1.450e-30
Identity = 54/73 (73.97%), Postives = 64/73 (87.67%), Query Frame = 0
Query:    8 QVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPK 80
            +V GIIYPPPDIR++VDKTA FVA+NGKSFEE+I AS EG+++KFNFMRPHDPY AYYEFKI +FE+ G  PK
Sbjct:   36 KVTGIIYPPPDIRSVVDKTAEFVARNGKSFEEKILASAEGQNSKFNFMRPHDPYNAYYEFKISEFEQ-GKKPK 107          
BLAST of mRNA_H-paniculata_contig8360.16378.1 vs. uniprot
Match: W7TP71_9STRA (SWAP/Surp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP71_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.150e-26
Identity = 53/73 (72.60%), Postives = 64/73 (87.67%), Query Frame = 0
Query:    8 QVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEEN-GDAP 79
            +V GIIYPPPDIRA+VDKTA++VA+NGKSFE+RI +SEEGKS+KFNFM+P DPY AYYE +IR FEE  G+ P
Sbjct:   32 KVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEGP 104          
BLAST of mRNA_H-paniculata_contig8360.16378.1 vs. uniprot
Match: A0A4D9CLT9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLT9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.120e-26
Identity = 53/73 (72.60%), Postives = 64/73 (87.67%), Query Frame = 0
Query:    8 QVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEEN-GDAP 79
            +V GIIYPPPDIRA+VDKTA++VA+NGKSFE+RI +SEEGKS+KFNFM+P DPY AYYE +IR FEE  G+ P
Sbjct:   32 KVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRRFEEGKGEGP 104          
BLAST of mRNA_H-paniculata_contig8360.16378.1 vs. uniprot
Match: A0A8J2SH94_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH94_9STRA)

HSP 1 Score: 109 bits (272), Expect = 5.310e-26
Identity = 57/84 (67.86%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    2 LNQIAP---QVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKPV 82
            L + AP   +V G+I PPPDIRAIVDKTA FVA+NGK FE RIQAS EG+S KF FMRP+DPY AYYEFKIR+ EEN    K V
Sbjct:   17 LQEAAPSSGEVTGVIRPPPDIRAIVDKTALFVARNGKQFEARIQASAEGQSQKFAFMRPNDPYNAYYEFKIREVEENDGELKVV 100          
BLAST of mRNA_H-paniculata_contig8360.16378.1 vs. uniprot
Match: A0A482SIF0_9ARCH (SURP motif domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIF0_9ARCH)

HSP 1 Score: 98.6 bits (244), Expect = 2.950e-25
Identity = 47/63 (74.60%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    8 QVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIR 70
            +V G+I PPP+IRAIVDKTA+FV KNGKSFE+RI  S EGK+AKFNFMR  DPY+AYYE KIR
Sbjct:   15 KVVGVIIPPPEIRAIVDKTAQFVGKNGKSFEQRILNSAEGKTAKFNFMREFDPYHAYYELKIR 77          
BLAST of mRNA_H-paniculata_contig8360.16378.1 vs. uniprot
Match: A0A7S3LZB0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZB0_9STRA)

HSP 1 Score: 104 bits (259), Expect = 7.130e-25
Identity = 48/66 (72.73%), Postives = 58/66 (87.88%), Query Frame = 0
Query:    8 QVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFE 73
            ++ G+I PPP+IRA+VDKTA FVAK GKSFE+R+ ASEEGK+AKFNFMRP DPY+AYYE KIR+ E
Sbjct:   10 KITGVIIPPPEIRAVVDKTAAFVAKIGKSFEQRVLASEEGKTAKFNFMRPFDPYHAYYEMKIREGE 75          
BLAST of mRNA_H-paniculata_contig8360.16378.1 vs. uniprot
Match: A0A7R9V085_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V085_9CHLO)

HSP 1 Score: 96.3 bits (238), Expect = 3.960e-22
Identity = 48/82 (58.54%), Postives = 63/82 (76.83%), Query Frame = 0
Query:    2 LNQIAPQVK--GIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKP 81
            + ++A Q K  G+I PPPDIRAIVDKTA FVAKNG  FE RI  +E+  + KFNF++PHDPY+AYY+ +I++F+E G A KP
Sbjct:   33 IKKLATQTKAIGVILPPPDIRAIVDKTAAFVAKNGTEFERRILGNEQN-NVKFNFLQPHDPYHAYYKLRIKNFQE-GTAAKP 112          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8360.16378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWN9_ECTSI9.770e-4197.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C863_9STRA4.390e-3280.56Surp module-domain-containing protein n=1 Tax=Trib... [more]
A0A7S2XZ85_9STRA1.930e-3172.97Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3XR42_HETAK1.450e-3073.97Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TP71_9STRA1.150e-2672.60SWAP/Surp n=1 Tax=Nannochloropsis gaditana TaxID=7... [more]
A0A4D9CLT9_9STRA2.120e-2672.60Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8J2SH94_9STRA5.310e-2667.86Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A482SIF0_9ARCH2.950e-2574.60SURP motif domain-containing protein n=1 Tax=archa... [more]
A0A7S3LZB0_9STRA7.130e-2572.73Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A7R9V085_9CHLO3.960e-2258.54Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000061SWAP/SurpSMARTSM00648surpneu2coord: 20..74
e-value: 5.7E-18
score: 75.7
IPR000061SWAP/SurpPFAMPF01805Surpcoord: 20..69
e-value: 4.0E-17
score: 61.9
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 22..65
score: 17.269
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790coord: 17..77
e-value: 4.9E-24
score: 85.9
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 9..70
NoneNo IPR availablePANTHERPTHR15316SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATEDcoord: 9..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8360contigH-paniculata_contig8360:9681..9926 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8360.16378.1mRNA_H-paniculata_contig8360.16378.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8360 9681..9926 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8360.16378.1 ID=prot_H-paniculata_contig8360.16378.1|Name=mRNA_H-paniculata_contig8360.16378.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
ILNQIAPQVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSA
KFNFMRPHDPYYAYYEFKIRDFEENGDAPKPV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000061Surp
IPR035967SWAP/Surp_sf