prot_H-paniculata_contig836.16375.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: D7FMK3_ECTSI (Probable 16S rRNA-processing protein rimM n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK3_ECTSI) HSP 1 Score: 409 bits (1050), Expect = 1.320e-137 Identity = 211/308 (68.51%), Postives = 248/308 (80.52%), Query Frame = 0
Query: 94 LEEAFGKGQGKHAGTKRRRHSNKYKSNSKATSSLDPWEMQLRAAEEEKDTTQNALERAEMEXXXXXXXXXXXXXXXXGEELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEVDLEDNEYLVRDIVGARAYRADDESVFLGDVVGVVLGDEVSSSIGLASDSLELRLPIENPGAVSKVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLPGNS 401
LE+AFG G+GKHAG KRRRH+NKY S SKA +DPWE QLR +E K A+ERAE+E + YPDEEDIDPYDPSTFGYIEVGHIQGAHG+KGEVKVRS+TDF + RLCTPG+K+IKAPNRRFPRD+EL GRWQKE+IFL+QLEGVK+RDAAAALRGHK+YVLE +EVDLE+NEY+VRD+VG RAYR DDESV++G+VVGVVLG+++S + GLASD LELRLP+ENPG + K CYIPFVPA VPVV+++ GN +L+DLPEGLLDLAV VEEKV I+GFLP S
Sbjct: 122 LEDAFGAGKGKHAGKKRRRHANKYSSKSKA-GEIDPWERQLRNSEA-KMREAEAIERAEVEELEKRRIQRRIERGL----VEYPDEEDIDPYDPSTFGYIEVGHIQGAHGIKGEVKVRSSTDFAINRLCTPGIKHIKAPNRRFPRDIELIGGRWQKEEIFLLQLEGVKTRDAAAALRGHKVYVLEDEEVDLEENEYMVRDLVGGRAYRQDDESVYIGEVVGVVLGNDISPTAGLASDLLELRLPLENPGDIPKECYIPFVPALVPVVRVEEGNCT---ILMDLPEGLLDLAVEVEEKVAIRGFLPPGS 420
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: A0A7S2W7N6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7N6_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.790e-52 Identity = 124/329 (37.69%), Postives = 175/329 (53.19%), Query Frame = 0
Query: 81 RGRSKATIGNTHTLEEAFGKGQGKHAGTKRRRHSNKYKSNSKATSSLDPWEMQLRAAEEEKDTTQNALERAEMEXXXXXXXXXXXXXXXXGEELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPG-VKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEV-DLEDNEYLVRDIVGARAYRADDESVFLGDVVGVVLGDEVSSSIGLASDSLELRL----PIENPGAVSKVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLPGNSSS 403
RG S A L+ A GKG GKH +K+R NKY S SK LDP + Q+ ++ K + ++A YPDE DI+PYDP+TFG+ VG + GAHG+KGE KV +DF +RLC+ G + Y K NRRFP+ ++ GR+ + F+++L GV+ R AAAA +G+++YV EGD L+++EY+V+D+VG D +G V+GVV DE+ + L SD LE++L E A C +P VP VP + + A + + PEGLLDL EKV I+ LP + S
Sbjct: 91 RGLSAAGGDEMEALQRAVGKGVGKHGRSKKRMKINKYASQSKVVGRLDPLDAQVEKSK--KYNEEQERKKATGVVPDPLQAPGPSPDQRVRGRFTYPDEADINPYDPTTFGFTLVGVVSGAHGLKGEFKVAGESDFGEERLCSAGALGYFKPANRRFPKPFHIQEGRYIGDGGFIVRLRGVQDRQAAAAFQGNEVYVREGDRPRGLQEDEYMVKDLVGLEVV-LQDTGRLVGKVIGVVTRDEICTVDSLGSDLLEVQLLDGDGAEGDSAEVHTCLVPLVPPIVPHIDLAACRAE-----ITPPEGLLDLVHVKREKVRIRALLPERAES 411
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: A0A835Z033_9STRA (RimM N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z033_9STRA) HSP 1 Score: 181 bits (460), Expect = 2.160e-51 Identity = 105/207 (50.72%), Postives = 138/207 (66.67%), Query Frame = 0
Query: 94 LEEAFGKGQGKHAGTKRRRHSNKYKSNSKATSSLDPWEMQLRAAEEEKDTTQNALERAEMEXXXXXXXXXXXXXXXXGEELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEVDLEDNEYLVRDIVGARAY 300
L EAFG G+GKHAG +RR HSNKY + SK LDPWE QLRAAE T XXXXXX E +PDE +IDPYDP+TFG++EVG + GAHGV+GE+KVR +T F RLC G +++KAPNRR+PR V+L GR Q+ED++++ L+GV SR+ AA LR H +YV + +L++ E++V D+VG +AY
Sbjct: 28 LAEAFGVGRGKHAGKQRREHSNKYAAASKQAP-LDPWEQQLRAAEAGASTAXXXXXXXXXXXXXXXXGGKEVRERGLVE---FPDEVEIDPYDPTTFGFVEVGVVLGAHGVRGEIKVRCSTGFGDDRLCRGGNRHVKAPNRRYPRKVKLLQGRLQREDVYIVSLDGVSSREQAAKLREHVMYVAADERPELDEGEFMVTDLVGLKAY 230
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: B8C5U7_THAPS (RimM domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5U7_THAPS) HSP 1 Score: 180 bits (456), Expect = 3.140e-50 Identity = 108/245 (44.08%), Postives = 149/245 (60.82%), Query Frame = 0
Query: 176 YPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDI----------FLIQLEGVKSRDAAAALRGHKIYVLEGDEVD--LEDNEYLVRDIVGARAYRADDES----------VFLGDVVGVVLGDEVSSSIGLASDSLELRLPIENPGAVSKVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLP 398
+PD + IDPYDP+T+GYIE+G I GAHGV G +K+ S TDF RLC PG+++IK PNRR PR+V+L GR + + +LI+L+ + RDAA LRG +Y L ++VD LE++EYLV D+VG Y + E +F+G + GVV+G E+ + GL D LE+ LP + G ++ IPFVP V V +D G V+++ P+GLLDL+ EEKV IKG LP
Sbjct: 40 FPDTKAIDPYDPTTYGYIELGTIVGAHGVHGMMKLTSITDFSEHRLCQPGIRHIKPPNRRSPREVQLVEGRPLRSEAATIGTDTNPKYLIRLDHINDRDAALKLRGCVLYSLIEEKVDGLLEEDEYLVSDLVGLNVYLEEHEDGDSNSRSFEDLFVGFIRGVVMGSEMCAIPGLGQDLLEVVLPSIHGGQGDEMVMIPFVPQIVSSVDLD-----GRMVVINPPKGLLDLSYRREEKVRIKGLLP 279
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: A0A7R9U2Y6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2Y6_9STRA) HSP 1 Score: 178 bits (452), Expect = 3.900e-48 Identity = 128/372 (34.41%), Postives = 187/372 (50.27%), Query Frame = 0
Query: 83 RSKATIGNTHTLEEAFGKGQGKHAGTKRRRHSNKYKSNSKATSSLDPWEMQL---------------------------------RAAEEEKDTTQNALERAEMEXXXXXXXXXXXXXXXXGEELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEVDLE------DNEYLVRDIVGARAYRADDESVFLGDVVGVVLGDEVS--SSIGLASDSLELRLPIENPGAVSKVC---------------YIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLP 398
+S+A + L +A G G+GKH + + K +S S+A LDP+E L +AAEE + + LE ++ +P E +DPYDPSTFGYI VG++ GAHG++G V++R +DF R+C GV+++K P+RR PR V L+ G+ Q++D+++++L GV++R+ AA L+G +YVLE EV E D+EY V D+VG R ++G V GVV ++V S GL +D LEL LP A S V +PFV A VP V+I G + +D PEGLL++A V+EKV++KG LP
Sbjct: 47 KSEAARVDVDLLSQAVGIGRGKHFSGQSKASKRKKRSKSEAPKRLDPFEEALQRQAESKVAQARDSRAREGLFLQRRDQRMQEIVKAAEEARGEMMSELEEENVDEDAPHSDSGLGVAGVT-RPSAFPRETTVDPYDPSTFGYIYVGYVMGAHGIQGHVRIRVDSDFASDRVCKKGVRHLKDPSRRMPRAVLLEGGKLQRDDVYIVKLSGVRNRNDAARLQGWSLYVLE--EVAREPGALDADDEYFVEDLVGLRVLHVK-TGEYVGSVAGVVASEDVCTVSVEGLGNDLLELELPPLKNYANSPVTADAYKSGFGWRERRLLVPFVNAIVPDVRISEG-----VIYIDPPEGLLEMAAEVDEKVIVKGLLP 409
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: A0A7S4JQD1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JQD1_9STRA) HSP 1 Score: 177 bits (450), Expect = 7.290e-48 Identity = 106/250 (42.40%), Postives = 151/250 (60.40%), Query Frame = 0
Query: 173 ELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEV-DLEDNEYLVRDIVGARAYR------------ADDES--------VFLGDVVGVVLGDEVSSSIGLASDSLELRLPIENPGAVS---KVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLP 398
++ +PD + IDPYDP+T+GY E+G I GAHGV G VKV + T+F +RLC PG++++KA NRR PR+V+L GR + + +L++L+G+ RDAA LRG +Y L+ + ++ED+E+L+ D+VG + +DD+ F+G V G++LGD++ S GLA DSLE+ LP G S ++ IPFVP VP V G + + P GLLDL EEKV IKGFLP
Sbjct: 170 KMQFPDTKKIDPYDPTTYGYTELGTIVGAHGVHGLVKVSAVTEFA-ERLCRPGIRHLKAQNRRSPREVQLLEGRHRLGEEYLVKLDGIGDRDAANKLRGTVLYALQQERPSEIEDDEFLISDLVGLDVFLDTNYGDSEGESLSDDDGDCEDGAGRSFVGTVGGILLGDDMCSIPGLAQDSLEIILPRGRGGTPSWRDEMVLIPFVPQIVPTVDTSEGA-----IYIAPPPGLLDLTYVKEEKVRIKGFLP 413
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: B7FSX2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSX2_PHATC) HSP 1 Score: 174 bits (441), Expect = 2.410e-47 Identity = 121/334 (36.23%), Postives = 172/334 (51.50%), Query Frame = 0
Query: 73 EGITTP-SERGRSKATIGNTHTLEEAFGKGQGKHAGTKRRRHSNKYKSNSKATSSLDPWEMQLRAAEEEKDTTQNALERAEMEXXXXXXXXXXXXXXXXGEELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEVDLEDNEYLVRDIVGARAYRADDESV----FLGDVVGVVLGDEVSSSIGLASDSLELRLPIENPGAVS---KVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLP 398
+G+TTP +R +G L + G+ RR NKY SK TS DP+E L + ++ + + R + L +PD ++IDPYDP+TFGYIEVG ++GAHGV G VKV+ T F + RLC G+K++K P +R PR V L G+ + + +LI+LE + RD A LRG +YV E +++ + EY+V D+VG+ + ++V FLG V GVV DE+ S GL D LE+ L G S ++ IP VP V V G + ++ P GLLDL EE+ +KGFLP
Sbjct: 25 QGVTTPIRKRNFCAYALGEADELARSVGQ---------RREKKNKYIEFSKVTSGKDPFESLLEESFSKRKALDDDIARKDE-------LSSSPPKIGNSGNLSFPDNKNIDPYDPTTFGYIEVGIVRGAHGVHGWVKVKPTTSFPIDRLCVAGIKHLKPPKKRAPRKVLLLEGKRRNAEEYLIKLEQINDRDEALKLRGSLLYVREEEKMATDQEEYMVSDLVGSEVFLDTLDTVENPLFLGVVNGVVFADEMCSIPGLGHDMLEVVLRKGQDGMASLRDELVLIPMVPQIVTHVSAAKG-----VIHINPPSGLLDLTYLREERAKLKGFLP 337
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: A0A7S1TZD9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZD9_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.090e-46 Identity = 101/246 (41.06%), Postives = 150/246 (60.98%), Query Frame = 0
Query: 176 YPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEVD----LEDNEYLVRDIVGARAYRADDESVFLGDVVGVVLGDEVSS--SIGLASDSLELRLP--------------IENPGAV--SKVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLPG 399
+P E +DP DPSTFGY +G++ GAHG+ G+V+++ +DF +R+C GV+++K P RR PR V L+SG+ Q++D+F+++ GVK R+ AA L+G +YVL+ D ED+E+ V D+VG R AD ++G V GV+ DEV + + GL +D LEL LP PG+ + +PFV VP V+I G++ V++D P GLLD+A+ EEKV++KG LPG
Sbjct: 165 FPAEATVDPNDPSTFGYQYLGYVMGAHGIHGQVRIKVDSDFAPERVCGRGVRHLKDPARRTPRAVLLESGKHQRDDVFIVKFSGVKGRNEAAKLQGWTLYVLDEVAKDEGLLQEDDEFFVDDLVGLRVEDAD--GAYVGSVAGVIAADEVCTLGARGLGNDLLELELPPLKSYADGDVVTAEAYEPGSGYRERTLLVPFVDDIVPEVRI--GDDGEGVVVIDPPPGLLDMAIEKEEKVILKGLLPG 406
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: K0SA13_THAOC (RimM domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SA13_THAOC) HSP 1 Score: 170 bits (431), Expect = 1.450e-46 Identity = 106/247 (42.91%), Postives = 146/247 (59.11%), Query Frame = 0
Query: 176 YPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDI----------FLIQLEGVKSRDAAAALRGHKIYVLEGDEVD--LEDNEYLVRDIVGARAYRADD---------ESVFLGDVVGVVLGDEVSSSIGLASDSLELRLPIE---NPGAVSKVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLP 398
+PD IDPYDP+T+GYIE+G I GAHGV+G +K+ S TDF RLC PG +++K P+RR PR+V+L GR + D +LI+LE V R+ A ++G +Y LEG+ VD LE +EY+V D+VG + D E +F+G+V GVVLG ++ ++ GL D LE+ LP +PG + +PFVP V V ++ G V + P GLLDL+ EEKV IKG LP
Sbjct: 38 FPDTTAIDPYDPTTYGYIELGTIIGAHGVRGLMKLASITDFSEHRLCKPGTRHLKLPDRRSPREVQLVEGRPMRSDAETAGSDVSPTYLIRLETVDDREQALKMKGCVLYALEGERVDDFLEPDEYIVSDLVGMNVFLDDSDDEHKGKSFEELFVGNVKGVVLGSDMCATPGLGQDLLEVVLPRRLGGDPG--DDLVLLPFVPEIVTGVDLN-----GKMVSVKPPGGLLDLSYRREEKVRIKGLLP 277
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: I2CPH4_NANGC (16s rrna-processing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPH4_NANGC) HSP 1 Score: 167 bits (424), Expect = 7.250e-45 Identity = 116/319 (36.36%), Postives = 168/319 (52.66%), Query Frame = 0
Query: 94 LEEAFGKGQGKHAGTKRRRHSNKYKSNSKATSSLDPWEMQLRAAEEEKDTTQNALERAEMEXXXXXXXXXXXXXXXXGEELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEVDLEDNEYLVRDIVGARAYRADDESVFLGDVVGVVLGDEVSSSIGLASDSLELRLPIEN-----------PGAVSKVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLPGNS 401
L AFGKG NKY++ S DP E LR A D T+ A E A+ E E+ YP +IDPY+P+TFG+IE G +QGAHGV G ++V+ +D L +PG+++IK P RR+PR + + R ED +L+++EG++ R+AAAALR KIYV E + LE++E+ V+D+V E V +G VV V+ + GLA+D LE+ L ++ P + +V +PFV VP+V + G + +D P GLLDLA EK+V++G LP +S
Sbjct: 28 LLRAFGKGXXXXXXXXXXXXXNKYEAFSHVKDGQDPLEEALRKAALANDPTR-AREEADEERRSESRTRG---------EVEYPSVLEIDPYEPNTFGFIEAGLVQGAHGVDGCLRVKGTSDVAGSALTSPGLRHIKGPKRRYPRPITVLEARATVEDTYLVKVEGIEGREAAAALRDFKIYVKEEERPSLEEDEFYVKDMVDMDVVMVGAEDVSIGRVVDVITAENARQ--GLANDLLEVELINQDDESGRPQLRTEPPPIYQVL-VPFVKQIVPIVDL-----PGRTLHIDPPPGLLDLAYAKAEKIVVRGALPSSS 328 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig836.16375.1 ID=prot_H-paniculata_contig836.16375.1|Name=mRNA_H-paniculata_contig836.16375.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=407bpback to top |