prot_H-paniculata_contig836.16375.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig836.16375.1
Unique Nameprot_H-paniculata_contig836.16375.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length407
Homology
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: D7FMK3_ECTSI (Probable 16S rRNA-processing protein rimM n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK3_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 1.320e-137
Identity = 211/308 (68.51%), Postives = 248/308 (80.52%), Query Frame = 0
Query:   94 LEEAFGKGQGKHAGTKRRRHSNKYKSNSKATSSLDPWEMQLRAAEEEKDTTQNALERAEMEXXXXXXXXXXXXXXXXGEELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEVDLEDNEYLVRDIVGARAYRADDESVFLGDVVGVVLGDEVSSSIGLASDSLELRLPIENPGAVSKVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLPGNS 401
            LE+AFG G+GKHAG KRRRH+NKY S SKA   +DPWE QLR +E  K     A+ERAE+E                   + YPDEEDIDPYDPSTFGYIEVGHIQGAHG+KGEVKVRS+TDF + RLCTPG+K+IKAPNRRFPRD+EL  GRWQKE+IFL+QLEGVK+RDAAAALRGHK+YVLE +EVDLE+NEY+VRD+VG RAYR DDESV++G+VVGVVLG+++S + GLASD LELRLP+ENPG + K CYIPFVPA VPVV+++ GN     +L+DLPEGLLDLAV VEEKV I+GFLP  S
Sbjct:  122 LEDAFGAGKGKHAGKKRRRHANKYSSKSKA-GEIDPWERQLRNSEA-KMREAEAIERAEVEELEKRRIQRRIERGL----VEYPDEEDIDPYDPSTFGYIEVGHIQGAHGIKGEVKVRSSTDFAINRLCTPGIKHIKAPNRRFPRDIELIGGRWQKEEIFLLQLEGVKTRDAAAALRGHKVYVLEDEEVDLEENEYMVRDLVGGRAYRQDDESVYIGEVVGVVLGNDISPTAGLASDLLELRLPLENPGDIPKECYIPFVPALVPVVRVEEGNCT---ILMDLPEGLLDLAVEVEEKVAIRGFLPPGS 420          
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: A0A7S2W7N6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7N6_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.790e-52
Identity = 124/329 (37.69%), Postives = 175/329 (53.19%), Query Frame = 0
Query:   81 RGRSKATIGNTHTLEEAFGKGQGKHAGTKRRRHSNKYKSNSKATSSLDPWEMQLRAAEEEKDTTQNALERAEMEXXXXXXXXXXXXXXXXGEELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPG-VKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEV-DLEDNEYLVRDIVGARAYRADDESVFLGDVVGVVLGDEVSSSIGLASDSLELRL----PIENPGAVSKVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLPGNSSS 403
            RG S A       L+ A GKG GKH  +K+R   NKY S SK    LDP + Q+  ++  K   +   ++A                        YPDE DI+PYDP+TFG+  VG + GAHG+KGE KV   +DF  +RLC+ G + Y K  NRRFP+   ++ GR+  +  F+++L GV+ R AAAA +G+++YV EGD    L+++EY+V+D+VG       D    +G V+GVV  DE+ +   L SD LE++L      E   A    C +P VP  VP + + A   +     +  PEGLLDL     EKV I+  LP  + S
Sbjct:   91 RGLSAAGGDEMEALQRAVGKGVGKHGRSKKRMKINKYASQSKVVGRLDPLDAQVEKSK--KYNEEQERKKATGVVPDPLQAPGPSPDQRVRGRFTYPDEADINPYDPTTFGFTLVGVVSGAHGLKGEFKVAGESDFGEERLCSAGALGYFKPANRRFPKPFHIQEGRYIGDGGFIVRLRGVQDRQAAAAFQGNEVYVREGDRPRGLQEDEYMVKDLVGLEVV-LQDTGRLVGKVIGVVTRDEICTVDSLGSDLLEVQLLDGDGAEGDSAEVHTCLVPLVPPIVPHIDLAACRAE-----ITPPEGLLDLVHVKREKVRIRALLPERAES 411          
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: A0A835Z033_9STRA (RimM N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z033_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.160e-51
Identity = 105/207 (50.72%), Postives = 138/207 (66.67%), Query Frame = 0
Query:   94 LEEAFGKGQGKHAGTKRRRHSNKYKSNSKATSSLDPWEMQLRAAEEEKDTTQNALERAEMEXXXXXXXXXXXXXXXXGEELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEVDLEDNEYLVRDIVGARAY 300
            L EAFG G+GKHAG +RR HSNKY + SK    LDPWE QLRAAE    T           XXXXXX           E   +PDE +IDPYDP+TFG++EVG + GAHGV+GE+KVR +T F   RLC  G +++KAPNRR+PR V+L  GR Q+ED++++ L+GV SR+ AA LR H +YV   +  +L++ E++V D+VG +AY
Sbjct:   28 LAEAFGVGRGKHAGKQRREHSNKYAAASKQAP-LDPWEQQLRAAEAGASTAXXXXXXXXXXXXXXXXGGKEVRERGLVE---FPDEVEIDPYDPTTFGFVEVGVVLGAHGVRGEIKVRCSTGFGDDRLCRGGNRHVKAPNRRYPRKVKLLQGRLQREDVYIVSLDGVSSREQAAKLREHVMYVAADERPELDEGEFMVTDLVGLKAY 230          
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: B8C5U7_THAPS (RimM domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5U7_THAPS)

HSP 1 Score: 180 bits (456), Expect = 3.140e-50
Identity = 108/245 (44.08%), Postives = 149/245 (60.82%), Query Frame = 0
Query:  176 YPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDI----------FLIQLEGVKSRDAAAALRGHKIYVLEGDEVD--LEDNEYLVRDIVGARAYRADDES----------VFLGDVVGVVLGDEVSSSIGLASDSLELRLPIENPGAVSKVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLP 398
            +PD + IDPYDP+T+GYIE+G I GAHGV G +K+ S TDF   RLC PG+++IK PNRR PR+V+L  GR  + +           +LI+L+ +  RDAA  LRG  +Y L  ++VD  LE++EYLV D+VG   Y  + E           +F+G + GVV+G E+ +  GL  D LE+ LP  + G   ++  IPFVP  V  V +D     G  V+++ P+GLLDL+   EEKV IKG LP
Sbjct:   40 FPDTKAIDPYDPTTYGYIELGTIVGAHGVHGMMKLTSITDFSEHRLCQPGIRHIKPPNRRSPREVQLVEGRPLRSEAATIGTDTNPKYLIRLDHINDRDAALKLRGCVLYSLIEEKVDGLLEEDEYLVSDLVGLNVYLEEHEDGDSNSRSFEDLFVGFIRGVVMGSEMCAIPGLGQDLLEVVLPSIHGGQGDEMVMIPFVPQIVSSVDLD-----GRMVVINPPKGLLDLSYRREEKVRIKGLLP 279          
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: A0A7R9U2Y6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2Y6_9STRA)

HSP 1 Score: 178 bits (452), Expect = 3.900e-48
Identity = 128/372 (34.41%), Postives = 187/372 (50.27%), Query Frame = 0
Query:   83 RSKATIGNTHTLEEAFGKGQGKHAGTKRRRHSNKYKSNSKATSSLDPWEMQL---------------------------------RAAEEEKDTTQNALERAEMEXXXXXXXXXXXXXXXXGEELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEVDLE------DNEYLVRDIVGARAYRADDESVFLGDVVGVVLGDEVS--SSIGLASDSLELRLPIENPGAVSKVC---------------YIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLP 398
            +S+A   +   L +A G G+GKH   + +    K +S S+A   LDP+E  L                                 +AAEE +    + LE   ++                     +P E  +DPYDPSTFGYI VG++ GAHG++G V++R  +DF   R+C  GV+++K P+RR PR V L+ G+ Q++D+++++L GV++R+ AA L+G  +YVLE  EV  E      D+EY V D+VG R         ++G V GVV  ++V   S  GL +D LEL LP     A S V                 +PFV A VP V+I  G      + +D PEGLL++A  V+EKV++KG LP
Sbjct:   47 KSEAARVDVDLLSQAVGIGRGKHFSGQSKASKRKKRSKSEAPKRLDPFEEALQRQAESKVAQARDSRAREGLFLQRRDQRMQEIVKAAEEARGEMMSELEEENVDEDAPHSDSGLGVAGVT-RPSAFPRETTVDPYDPSTFGYIYVGYVMGAHGIQGHVRIRVDSDFASDRVCKKGVRHLKDPSRRMPRAVLLEGGKLQRDDVYIVKLSGVRNRNDAARLQGWSLYVLE--EVAREPGALDADDEYFVEDLVGLRVLHVK-TGEYVGSVAGVVASEDVCTVSVEGLGNDLLELELPPLKNYANSPVTADAYKSGFGWRERRLLVPFVNAIVPDVRISEG-----VIYIDPPEGLLEMAAEVDEKVIVKGLLP 409          
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: A0A7S4JQD1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JQD1_9STRA)

HSP 1 Score: 177 bits (450), Expect = 7.290e-48
Identity = 106/250 (42.40%), Postives = 151/250 (60.40%), Query Frame = 0
Query:  173 ELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEV-DLEDNEYLVRDIVGARAYR------------ADDES--------VFLGDVVGVVLGDEVSSSIGLASDSLELRLPIENPGAVS---KVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLP 398
            ++ +PD + IDPYDP+T+GY E+G I GAHGV G VKV + T+F  +RLC PG++++KA NRR PR+V+L  GR +  + +L++L+G+  RDAA  LRG  +Y L+ +   ++ED+E+L+ D+VG   +             +DD+          F+G V G++LGD++ S  GLA DSLE+ LP    G  S   ++  IPFVP  VP V    G      + +  P GLLDL    EEKV IKGFLP
Sbjct:  170 KMQFPDTKKIDPYDPTTYGYTELGTIVGAHGVHGLVKVSAVTEFA-ERLCRPGIRHLKAQNRRSPREVQLLEGRHRLGEEYLVKLDGIGDRDAANKLRGTVLYALQQERPSEIEDDEFLISDLVGLDVFLDTNYGDSEGESLSDDDGDCEDGAGRSFVGTVGGILLGDDMCSIPGLAQDSLEIILPRGRGGTPSWRDEMVLIPFVPQIVPTVDTSEGA-----IYIAPPPGLLDLTYVKEEKVRIKGFLP 413          
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: B7FSX2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSX2_PHATC)

HSP 1 Score: 174 bits (441), Expect = 2.410e-47
Identity = 121/334 (36.23%), Postives = 172/334 (51.50%), Query Frame = 0
Query:   73 EGITTP-SERGRSKATIGNTHTLEEAFGKGQGKHAGTKRRRHSNKYKSNSKATSSLDPWEMQLRAAEEEKDTTQNALERAEMEXXXXXXXXXXXXXXXXGEELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEVDLEDNEYLVRDIVGARAYRADDESV----FLGDVVGVVLGDEVSSSIGLASDSLELRLPIENPGAVS---KVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLP 398
            +G+TTP  +R      +G    L  + G+         RR   NKY   SK TS  DP+E  L  +  ++    + + R +                     L +PD ++IDPYDP+TFGYIEVG ++GAHGV G VKV+  T F + RLC  G+K++K P +R PR V L  G+ +  + +LI+LE +  RD A  LRG  +YV E +++  +  EY+V D+VG+  +    ++V    FLG V GVV  DE+ S  GL  D LE+ L     G  S   ++  IP VP  V  V    G      + ++ P GLLDL    EE+  +KGFLP
Sbjct:   25 QGVTTPIRKRNFCAYALGEADELARSVGQ---------RREKKNKYIEFSKVTSGKDPFESLLEESFSKRKALDDDIARKDE-------LSSSPPKIGNSGNLSFPDNKNIDPYDPTTFGYIEVGIVRGAHGVHGWVKVKPTTSFPIDRLCVAGIKHLKPPKKRAPRKVLLLEGKRRNAEEYLIKLEQINDRDEALKLRGSLLYVREEEKMATDQEEYMVSDLVGSEVFLDTLDTVENPLFLGVVNGVVFADEMCSIPGLGHDMLEVVLRKGQDGMASLRDELVLIPMVPQIVTHVSAAKG-----VIHINPPSGLLDLTYLREERAKLKGFLP 337          
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: A0A7S1TZD9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZD9_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.090e-46
Identity = 101/246 (41.06%), Postives = 150/246 (60.98%), Query Frame = 0
Query:  176 YPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEVD----LEDNEYLVRDIVGARAYRADDESVFLGDVVGVVLGDEVSS--SIGLASDSLELRLP--------------IENPGAV--SKVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLPG 399
            +P E  +DP DPSTFGY  +G++ GAHG+ G+V+++  +DF  +R+C  GV+++K P RR PR V L+SG+ Q++D+F+++  GVK R+ AA L+G  +YVL+    D     ED+E+ V D+VG R   AD    ++G V GV+  DEV +  + GL +D LEL LP                 PG+    +   +PFV   VP V+I  G++    V++D P GLLD+A+  EEKV++KG LPG
Sbjct:  165 FPAEATVDPNDPSTFGYQYLGYVMGAHGIHGQVRIKVDSDFAPERVCGRGVRHLKDPARRTPRAVLLESGKHQRDDVFIVKFSGVKGRNEAAKLQGWTLYVLDEVAKDEGLLQEDDEFFVDDLVGLRVEDAD--GAYVGSVAGVIAADEVCTLGARGLGNDLLELELPPLKSYADGDVVTAEAYEPGSGYRERTLLVPFVDDIVPEVRI--GDDGEGVVVIDPPPGLLDMAIEKEEKVILKGLLPG 406          
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: K0SA13_THAOC (RimM domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SA13_THAOC)

HSP 1 Score: 170 bits (431), Expect = 1.450e-46
Identity = 106/247 (42.91%), Postives = 146/247 (59.11%), Query Frame = 0
Query:  176 YPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDI----------FLIQLEGVKSRDAAAALRGHKIYVLEGDEVD--LEDNEYLVRDIVGARAYRADD---------ESVFLGDVVGVVLGDEVSSSIGLASDSLELRLPIE---NPGAVSKVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLP 398
            +PD   IDPYDP+T+GYIE+G I GAHGV+G +K+ S TDF   RLC PG +++K P+RR PR+V+L  GR  + D           +LI+LE V  R+ A  ++G  +Y LEG+ VD  LE +EY+V D+VG   +  D          E +F+G+V GVVLG ++ ++ GL  D LE+ LP     +PG    +  +PFVP  V  V ++     G  V +  P GLLDL+   EEKV IKG LP
Sbjct:   38 FPDTTAIDPYDPTTYGYIELGTIIGAHGVRGLMKLASITDFSEHRLCKPGTRHLKLPDRRSPREVQLVEGRPMRSDAETAGSDVSPTYLIRLETVDDREQALKMKGCVLYALEGERVDDFLEPDEYIVSDLVGMNVFLDDSDDEHKGKSFEELFVGNVKGVVLGSDMCATPGLGQDLLEVVLPRRLGGDPG--DDLVLLPFVPEIVTGVDLN-----GKMVSVKPPGGLLDLSYRREEKVRIKGLLP 277          
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Match: I2CPH4_NANGC (16s rrna-processing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPH4_NANGC)

HSP 1 Score: 167 bits (424), Expect = 7.250e-45
Identity = 116/319 (36.36%), Postives = 168/319 (52.66%), Query Frame = 0
Query:   94 LEEAFGKGQGKHAGTKRRRHSNKYKSNSKATSSLDPWEMQLRAAEEEKDTTQNALERAEMEXXXXXXXXXXXXXXXXGEELVYPDEEDIDPYDPSTFGYIEVGHIQGAHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKEDIFLIQLEGVKSRDAAAALRGHKIYVLEGDEVDLEDNEYLVRDIVGARAYRADDESVFLGDVVGVVLGDEVSSSIGLASDSLELRLPIEN-----------PGAVSKVCYIPFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLPGNS 401
            L  AFGKG             NKY++ S      DP E  LR A    D T+ A E A+ E                  E+ YP   +IDPY+P+TFG+IE G +QGAHGV G ++V+  +D     L +PG+++IK P RR+PR + +   R   ED +L+++EG++ R+AAAALR  KIYV E +   LE++E+ V+D+V         E V +G VV V+  +      GLA+D LE+ L  ++           P  + +V  +PFV   VP+V +      G  + +D P GLLDLA    EK+V++G LP +S
Sbjct:   28 LLRAFGKGXXXXXXXXXXXXXNKYEAFSHVKDGQDPLEEALRKAALANDPTR-AREEADEERRSESRTRG---------EVEYPSVLEIDPYEPNTFGFIEAGLVQGAHGVDGCLRVKGTSDVAGSALTSPGLRHIKGPKRRYPRPITVLEARATVEDTYLVKVEGIEGREAAAALRDFKIYVKEEERPSLEEDEFYVKDMVDMDVVMVGAEDVSIGRVVDVITAENARQ--GLANDLLEVELINQDDESGRPQLRTEPPPIYQVL-VPFVKQIVPIVDL-----PGRTLHIDPPPGLLDLAYAKAEKIVVRGALPSSS 328          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig836.16375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMK3_ECTSI1.320e-13768.51Probable 16S rRNA-processing protein rimM n=1 Tax=... [more]
A0A7S2W7N6_9STRA2.790e-5237.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835Z033_9STRA2.160e-5150.72RimM N-terminal domain-containing protein (Fragmen... [more]
B8C5U7_THAPS3.140e-5044.08RimM domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7R9U2Y6_9STRA3.900e-4834.41Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4JQD1_9STRA7.290e-4842.40Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B7FSX2_PHATC2.410e-4736.23Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1TZD9_9STRA1.090e-4641.06Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
K0SA13_THAOC1.450e-4642.91RimM domain-containing protein n=1 Tax=Thalassiosi... [more]
I2CPH4_NANGC7.250e-4536.3616s rrna-processing protein (Fragment) n=1 Tax=Nan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 134..168
NoneNo IPR availablePANTHERPTHR33692FAMILY NOT NAMEDcoord: 169..384
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..406
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
IPR036976RimM, N-terminal domain superfamilyGENE3D2.40.30.60coord: 191..280
e-value: 2.3E-18
score: 68.0
IPR01196116S rRNA processing protein RimMTIGRFAMTIGR02273TIGR02273coord: 193..365
e-value: 3.6E-24
score: 83.0
IPR01196116S rRNA processing protein RimMHAMAPMF_00014Ribosome_mat_RimMcoord: 192..380
score: 19.084
IPR002676RimM, N-terminalPFAMPF01782RimMcoord: 194..278
e-value: 6.0E-20
score: 71.3
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 192..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig836contigH-paniculata_contig836:13638..18371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig836.16375.1mRNA_H-paniculata_contig836.16375.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig836 13490..18470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig836.16375.1 ID=prot_H-paniculata_contig836.16375.1|Name=mRNA_H-paniculata_contig836.16375.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=407bp
MLVRCALGVVLSSVMVMVDGFGTRLMSLKRGSPSTSRFLQGGAEFTTASH
QSTQHDASHTSFQGDGKVQDATEGITTPSERGRSKATIGNTHTLEEAFGK
GQGKHAGTKRRRHSNKYKSNSKATSSLDPWEMQLRAAEEEKDTTQNALER
AEMEEIEEGRKRRRAERQERGEELVYPDEEDIDPYDPSTFGYIEVGHIQG
AHGVKGEVKVRSATDFVLKRLCTPGVKYIKAPNRRFPRDVELKSGRWQKE
DIFLIQLEGVKSRDAAAALRGHKIYVLEGDEVDLEDNEYLVRDIVGARAY
RADDESVFLGDVVGVVLGDEVSSSIGLASDSLELRLPIENPGAVSKVCYI
PFVPAFVPVVQIDAGNEKGPYVLLDLPEGLLDLAVPVEEKVVIKGFLPGN
SSSGSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036976RimM_N_sf
IPR01196116S_RimM
IPR002676RimM_N
IPR009000Transl_B-barrel_sf