prot_H-paniculata_contig8331.16345.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8331.16345.1
Unique Nameprot_H-paniculata_contig8331.16345.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length294
Homology
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BLAST of mRNA_H-paniculata_contig8331.16345.1 vs. uniprot
Match: D7G719_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G719_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 1.490e-44
Identity = 101/200 (50.50%), Postives = 127/200 (63.50%), Query Frame = 0 
Query:    9 SPYLEVECAGLVFECLLEACTECLDAGGWISFDRKEDLTALGRVLRRCVMPVARLCSSALRALESQLDRSLTWRCSQTVGHDDERRRGKXXXXXXXXXDS-DCGSVKWCQPLLEQCDSCADGVRALCASVRRVAFAGGDKGSGTHDNMAAKNRQSSSSKRNQYQVALDRLVKILPGMVLQSDQLTTAVDNARQLLRLPQK 207
            SPY E+EC G+V ECL+EAC E L  G W S    E+LTALGR+LRRCV+PVA  CS  LRALESQL+R+L WRCSQT+  +  R RGK         +  D G+ + C+ LLEQCD CAD VR L  +VR   F   ++  G  D  +A            ++   DR+VKILPG VLQSDQL+ AVD+AR +L+LP+K
Sbjct: 1768 SPYEELECLGMVLECLVEACIESLYNGAWNSSAGAEELTALGRLLRRCVLPVALCCSKTLRALESQLERALAWRCSQTLDVNGVRDRGKSAAVPGGSTEGVDFGAARLCRGLLEQCDLCADAVRTLGTAVRSATFP--EEKDGGADAPSA---------LRPHRTVRDRIVKILPGAVLQSDQLSAAVDHARGVLQLPRK 1956
[Close]
BLAST of mRNA_H-paniculata_contig8331.16345.1 vs. uniprot
Match: D7G721_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G721_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 4.880e-31
Identity = 70/126 (55.56%), Postives = 83/126 (65.87%), Query Frame = 0 
Query:    9 SPYLEVECAGLVFECLLEACTECLDAGGWISFDRKEDLTALGRVLRRCVMPVARLCSSALRALESQLDRSLTWRCSQTVGHDDERRRGKXXXXXXXXXDS-DCGSVKWCQPLLEQCDSCADGVRAL 133
            SPY E+EC G+V ECL+EAC E L  G W S    E+LTALGR+LRRCV+PVA  CS  LR LESQL+R+L WRCSQT+     R RGK         +  D G+ + C+ LLEQCD CAD VR L
Sbjct:  957 SPYEELECLGMVLECLVEACIESLYNGAWNSSAGAEELTALGRLLRRCVLPVALCCSKTLRTLESQLERALAWRCSQTLDVKGVRDRGKSATVPGGSTEGVDFGAARLCRGLLEQCDLCADAVRML 1082
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8331.16345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G719_ECTSI1.490e-4450.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G721_ECTSI4.880e-3155.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8331contigH-paniculata_contig8331:1115..7223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8331.16345.1mRNA_H-paniculata_contig8331.16345.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8331 1115..7223 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8331.16345.1 ID=prot_H-paniculata_contig8331.16345.1|Name=mRNA_H-paniculata_contig8331.16345.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=294bp
RNSGAGARSPYLEVECAGLVFECLLEACTECLDAGGWISFDRKEDLTALG
RVLRRCVMPVARLCSSALRALESQLDRSLTWRCSQTVGHDDERRRGKGMG
EGDGEDDSDCGSVKWCQPLLEQCDSCADGVRALCASVRRVAFAGGDKGSG
THDNMAAKNRQSSSSKRNQYQVALDRLVKILPGMVLQSDQLTTAVDNARQ
LLRLPQKSQAAHPPPAHHRQSSPNKSHKATNKPTSKKSSPMREKTKYGSP
KLRASARLLARFIACGAMGRRGAVAGEGSKNRAVLSLGARLGRT
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