prot_H-paniculata_contig8317.16336.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8317.16336.1
Unique Nameprot_H-paniculata_contig8317.16336.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length113
Homology
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BLAST of mRNA_H-paniculata_contig8317.16336.1 vs. uniprot
Match: D8LLD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD1_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 5.660e-18
Identity = 55/127 (43.31%), Postives = 71/127 (55.91%), Query Frame = 0 
Query:    1 VVFSGVRFDVESGAKLDISMGAGTAFTGVFDLEINGGILSVADGGEVEVAGPIAFIVNAIQG-------AGGAIYNQGLIRLRGGVLFADNNCKT-----------------------GDGGAVWNG 97
            VVFSGVRF VES A L  S  A T FTG+ +L+ NGG+L+V++ G VE+ G   F  N++Q        +GG+IYN+G++RLRGG  FADN                           GDGGA+WNG
Sbjct:   72 VVFSGVRFVVESAASLIFSANASTEFTGIDNLQGNGGVLNVSEDGTVEMNGLAIFRNNSVQATTPETPCSGGSIYNKGIVRLRGGATFADNFVHGYYXXXXXXXXXXXXXXXXXXGTGGDGGALWNG 198
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8317.16336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLD1_ECTSI5.660e-1843.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8317contigH-paniculata_contig8317:6755..7848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8317.16336.1mRNA_H-paniculata_contig8317.16336.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8317 6755..7849 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8317.16336.1 ID=prot_H-paniculata_contig8317.16336.1|Name=mRNA_H-paniculata_contig8317.16336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp
VVFSGVRFDVESGAKLDISMGAGTAFTGVFDLEINGGILSVADGGEVEVA
GPIAFIVNAIQGAGGAIYNQGLIRLRGGVLFADNNCKTGDGGAVWNGPTG
TLRTGVAEFKANG
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