prot_H-paniculata_contig82918.16312.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig82918.16312.1
Unique Nameprot_H-paniculata_contig82918.16312.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length144
Homology
BLAST of mRNA_H-paniculata_contig82918.16312.1 vs. uniprot
Match: A0A8F0F755_9PHAE (ATP-dependent clp protease ATP-binding subunit n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F755_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 2.430e-70
Identity = 116/144 (80.56%), Postives = 128/144 (88.89%), Query Frame = 0
Query:    1 MFERFTEAALQVIMTSQEEARRLGHNFVGTEQIFLGLLGEKDGITTHAVREYGINIRTVRAEIERLVGKGTGFVAIEIPFTPRAKKVLEVAIRQSHDLEHNYINTEHLLLALLDEVDGVCAKVFQNLGANIPRIKAYVLNEINE 144
            MFERFTE ALQVIM SQEE+RRLGHNFVGTEQI LGLLGE  G    AVREYGINIRTVR E+ERL+GKGTGFVAIEIPFTPRAKK+LEV+IRQS +L H+YINTEH+ LALL+E DG+CAKV QNLGANIPRIK+YVLNE+ E
Sbjct:    1 MFERFTERALQVIMMSQEESRRLGHNFVGTEQILLGLLGEGSGSVVDAVREYGINIRTVRIEVERLIGKGTGFVAIEIPFTPRAKKILEVSIRQSKELNHSYINTEHIFLALLNETDGICAKVLQNLGANIPRIKSYVLNELTE 144          
BLAST of mRNA_H-paniculata_contig82918.16312.1 vs. uniprot
Match: D1J7B8_ECTSI (ATP-dependent Clp protease ATP-binding subunit clpA homolog n=9 Tax=Ectocarpales TaxID=2877 RepID=D1J7B8_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 1.880e-69
Identity = 112/144 (77.78%), Postives = 131/144 (90.97%), Query Frame = 0
Query:    1 MFERFTEAALQVIMTSQEEARRLGHNFVGTEQIFLGLLGEKDGITTHAVREYGINIRTVRAEIERLVGKGTGFVAIEIPFTPRAKKVLEVAIRQSHDLEHNYINTEHLLLALLDEVDGVCAKVFQNLGANIPRIKAYVLNEINE 144
            MFERFTE ALQVIM SQEE+RRLGHNFVGTEQI LGLLGE  G+T +AVREYGINIR VR E+ERL+GKGTGFVAIEIPFTPRAKK+LE++I+QS DL H+YINTEH+ LALL++ DG+CAKV QNLGANIPRIK+Y+LNE+++
Sbjct:    1 MFERFTERALQVIMMSQEESRRLGHNFVGTEQILLGLLGEGCGVTINAVREYGINIRKVRIEVERLIGKGTGFVAIEIPFTPRAKKILEMSIKQSKDLNHSYINTEHIFLALLNDTDGICAKVLQNLGANIPRIKSYILNELDQ 144          
BLAST of mRNA_H-paniculata_contig82918.16312.1 vs. uniprot
Match: A0A2I4Q2E7_9PHAE (ATP-dependent clp protease ATP-binding subunit n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2E7_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 2.300e-69
Identity = 113/143 (79.02%), Postives = 128/143 (89.51%), Query Frame = 0
Query:    1 MFERFTEAALQVIMTSQEEARRLGHNFVGTEQIFLGLLGEKDGITTHAVREYGINIRTVRAEIERLVGKGTGFVAIEIPFTPRAKKVLEVAIRQSHDLEHNYINTEHLLLALLDEVDGVCAKVFQNLGANIPRIKAYVLNEIN 143
            MFERFTE ALQVIM SQEE+RRLGHNFVGTEQI LGLLGE +GI T AVR+YGI +R VR E+ERL+GKGTGFVA+EIPFTPRAKKVLE AIRQS DL H+Y+NTEH+ LALL+++DG+C KV QNLGANIPRIKAYVLNE+N
Sbjct:    1 MFERFTENALQVIMMSQEESRRLGHNFVGTEQILLGLLGEGNGIATDAVRDYGITLRKVRMEVERLIGKGTGFVALEIPFTPRAKKVLEAAIRQSKDLNHSYVNTEHIFLALLNDLDGICGKVLQNLGANIPRIKAYVLNELN 143          
BLAST of mRNA_H-paniculata_contig82918.16312.1 vs. uniprot
Match: A0A0R6M4R6_UNDPI (ATP-dependent clp protease ATP-binding subunit n=63 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M4R6_UNDPI)

HSP 1 Score: 233 bits (593), Expect = 4.580e-69
Identity = 113/144 (78.47%), Postives = 131/144 (90.97%), Query Frame = 0
Query:    1 MFERFTEAALQVIMTSQEEARRLGHNFVGTEQIFLGLLGEKDGITTHAVREYGINIRTVRAEIERLVGKGTGFVAIEIPFTPRAKKVLEVAIRQSHDLEHNYINTEHLLLALLDEVDGVCAKVFQNLGANIPRIKAYVLNEINE 144
            MFERFTE ALQVIM SQEE+RRLGHNFVGTEQI LGLLGE  G+TT+AVREYGI IR VR E+ERL+GKGTGFVAIEIPFTPRAKKVLE++I+QS +L H+YINTEH+ LALL++ DG+C+KV QNLGANIPRIKAYVLNE+++
Sbjct:    1 MFERFTERALQVIMMSQEESRRLGHNFVGTEQILLGLLGEGCGVTTNAVREYGITIRKVRIEVERLIGKGTGFVAIEIPFTPRAKKVLEMSIKQSKELNHSYINTEHIFLALLNDTDGICSKVLQNLGANIPRIKAYVLNELDK 144          
BLAST of mRNA_H-paniculata_contig82918.16312.1 vs. uniprot
Match: A0A8E6D4W2_9PHAE (Clp protease ATP binding subunit n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D4W2_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 2.220e-63
Identity = 103/144 (71.53%), Postives = 124/144 (86.11%), Query Frame = 0
Query:    1 MFERFTEAALQVIMTSQEEARRLGHNFVGTEQIFLGLLGEKDGITTHAVREYGINIRTVRAEIERLVGKGTGFVAIEIPFTPRAKKVLEVAIRQSHDLEHNYINTEHLLLALLDEVDGVCAKVFQNLGANIPRIKAYVLNEINE 144
            MFERFTE ALQVIM +QEE+RRLGHNFVGTEQ+ LGL+GE  G+  +AVREYGIN+R VR E+ERL+G+GTGFVAIEIPFTPRAKK+LE++IRQS DL H+YI TEH+ LALL++ DG+C KV QNLGAN+PR+K  VL E+ E
Sbjct:    1 MFERFTEKALQVIMMAQEESRRLGHNFVGTEQLLLGLMGEGCGVANNAVREYGINMREVRLEVERLIGRGTGFVAIEIPFTPRAKKILEMSIRQSKDLNHSYIGTEHIFLALLNDKDGICTKVLQNLGANLPRVKVNVLREMGE 144          
BLAST of mRNA_H-paniculata_contig82918.16312.1 vs. uniprot
Match: A0A520LKX1_9SYNE (ATP-dependent Clp protease ATP-binding subunit ClpC (Fragment) n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A520LKX1_9SYNE)

HSP 1 Score: 178 bits (451), Expect = 1.850e-54
Identity = 79/144 (54.86%), Postives = 113/144 (78.47%), Query Frame = 0
Query:    1 MFERFTEAALQVIMTSQEEARRLGHNFVGTEQIFLGLLGEKDGITTHAVREYGINIRTVRAEIERLVGKGTGFVAIEIPFTPRAKKVLEVAIRQSHDLEHNYINTEHLLLALLDEVDGVCAKVFQNLGANIPRIKAYVLNEINE 144
            MFERFTE A++VIM +QEEARRLGHNFVGTEQI LGL+GE  G+    ++  G+N++  R E+E+++G+G+GFVA+EIPFTPRAK+VLE+++ ++  L HNYI TEHLLL L+ E +GV A+V +NLG ++ +++  V+  + E
Sbjct:    1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144          
BLAST of mRNA_H-paniculata_contig82918.16312.1 vs. uniprot
Match: A0A1Z9J505_9SYNE (ATP-dependent Clp protease ATP-binding subunit ClpC (Fragment) n=1 Tax=Synechococcus sp. TMED169 TaxID=1986593 RepID=A0A1Z9J505_9SYNE)

HSP 1 Score: 178 bits (451), Expect = 7.190e-54
Identity = 79/144 (54.86%), Postives = 113/144 (78.47%), Query Frame = 0
Query:    1 MFERFTEAALQVIMTSQEEARRLGHNFVGTEQIFLGLLGEKDGITTHAVREYGINIRTVRAEIERLVGKGTGFVAIEIPFTPRAKKVLEVAIRQSHDLEHNYINTEHLLLALLDEVDGVCAKVFQNLGANIPRIKAYVLNEINE 144
            MFERFTE A++VIM +QEEARRLGHNFVGTEQI LGL+GE  G+    ++  G+N++  R E+E+++G+G+GFVA+EIPFTPRAK+VLE+++ ++  L HNYI TEHLLL L+ E +GV A+V +NLG ++ +++  V+  + E
Sbjct:    1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144          
BLAST of mRNA_H-paniculata_contig82918.16312.1 vs. uniprot
Match: UPI00198B0BC6 (AAA family ATPase n=2 Tax=Bacteria TaxID=2 RepID=UPI00198B0BC6)

HSP 1 Score: 177 bits (450), Expect = 5.510e-53
Identity = 79/144 (54.86%), Postives = 113/144 (78.47%), Query Frame = 0
Query:    1 MFERFTEAALQVIMTSQEEARRLGHNFVGTEQIFLGLLGEKDGITTHAVREYGINIRTVRAEIERLVGKGTGFVAIEIPFTPRAKKVLEVAIRQSHDLEHNYINTEHLLLALLDEVDGVCAKVFQNLGANIPRIKAYVLNEINE 144
            MFERFTE A++VIM +QEEARRLGHNFVGTEQI LGL+GE  G+    ++  G+N++  R E+E+++G+G+GFVA+EIPFTPRAK+VLE+++ ++  L HNYI TEHLLL L+ E +GV A+V +NLG ++ +++  V+  + E
Sbjct:    1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144          
BLAST of mRNA_H-paniculata_contig82918.16312.1 vs. uniprot
Match: A0A8J9WJ69_9CHLO (Chaperone protein ClpC1, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WJ69_9CHLO)

HSP 1 Score: 179 bits (454), Expect = 7.440e-53
Identity = 80/144 (55.56%), Postives = 113/144 (78.47%), Query Frame = 0
Query:    1 MFERFTEAALQVIMTSQEEARRLGHNFVGTEQIFLGLLGEKDGITTHAVREYGINIRTVRAEIERLVGKGTGFVAIEIPFTPRAKKVLEVAIRQSHDLEHNYINTEHLLLALLDEVDGVCAKVFQNLGANIPRIKAYVLNEINE 144
            MFERFTE A++V+M +QEEARRLGHNFVGTEQI LGL+GE  GI    ++  G+N++  R E+E+++G+G+GFVA+EIPFTPRAK+VLE+++ ++  L HNYI TEH+LL LL E +GV A+V + LGA++ +I+  V+  + E
Sbjct:    2 MFERFTEKAIKVVMLAQEEARRLGHNFVGTEQILLGLIGESTGIAAKVLKSMGVNLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHILLGLLREGEGVAARVLETLGADVTKIRTQVIRMVGE 145          
BLAST of mRNA_H-paniculata_contig82918.16312.1 vs. uniprot
Match: UPI000B8CF2F5 (chaperone protein ClpC1, chloroplastic-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CF2F5)

HSP 1 Score: 177 bits (450), Expect = 7.900e-53
Identity = 83/144 (57.64%), Postives = 112/144 (77.78%), Query Frame = 0
Query:    1 MFERFTEAALQVIMTSQEEARRLGHNFVGTEQIFLGLLGEKDGITTHAVREYGINIRTVRAEIERLVGKGTGFVAIEIPFTPRAKKVLEVAIRQSHDLEHNYINTEHLLLALLDEVDGVCAKVFQNLGANIPRIKAYVLNEINE 144
            MFERFTE A++VIM +QEEARRLGHNFVGTEQI LGL+GE  GI    ++  GIN++  R E+E+++G+G+GFVA+EIPFTPRAK+VLE+++ ++  L HNYI +EHLLL LL E +GV A+V +NLGA+   I+  V+  + E
Sbjct:   57 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGE 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig82918.16312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F755_9PHAE2.430e-7080.56ATP-dependent clp protease ATP-binding subunit n=1... [more]
D1J7B8_ECTSI1.880e-6977.78ATP-dependent Clp protease ATP-binding subunit clp... [more]
A0A2I4Q2E7_9PHAE2.300e-6979.02ATP-dependent clp protease ATP-binding subunit n=1... [more]
A0A0R6M4R6_UNDPI4.580e-6978.47ATP-dependent clp protease ATP-binding subunit n=6... [more]
A0A8E6D4W2_9PHAE2.220e-6371.53Clp protease ATP binding subunit n=1 Tax=Ishige ok... [more]
A0A520LKX1_9SYNE1.850e-5454.86ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A1Z9J505_9SYNE7.190e-5454.86ATP-dependent Clp protease ATP-binding subunit Clp... [more]
UPI00198B0BC65.510e-5354.86AAA family ATPase n=2 Tax=Bacteria TaxID=2 RepID=U... [more]
A0A8J9WJ69_9CHLO7.440e-5355.56Chaperone protein ClpC1, chloroplastic n=1 Tax=Coc... [more]
UPI000B8CF2F57.900e-5357.64chaperone protein ClpC1, chloroplastic-like n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004176Clp, N-terminalPFAMPF02861Clp_Ncoord: 16..68
e-value: 1.6E-14
score: 53.7
coord: 97..142
e-value: 1.3E-12
score: 47.7
IPR036628Clp, N-terminal domain superfamilyGENE3D1.10.1780.10coord: 1..144
e-value: 1.1E-47
score: 163.6
IPR036628Clp, N-terminal domain superfamilySUPERFAMILY81923Double Clp-N motifcoord: 3..140
NoneNo IPR availablePANTHERPTHR11638ATP-DEPENDENT CLP PROTEASEcoord: 1..138
NoneNo IPR availablePANTHERPTHR11638:SF155coord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig82918contigH-paniculata_contig82918:14..445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig82918.16312.1mRNA_H-paniculata_contig82918.16312.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig82918 14..445 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig82918.16312.1 ID=prot_H-paniculata_contig82918.16312.1|Name=mRNA_H-paniculata_contig82918.16312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=144bp
MFERFTEAALQVIMTSQEEARRLGHNFVGTEQIFLGLLGEKDGITTHAVR
EYGINIRTVRAEIERLVGKGTGFVAIEIPFTPRAKKVLEVAIRQSHDLEH
NYINTEHLLLALLDEVDGVCAKVFQNLGANIPRIKAYVLNEINE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004176Clp_N
IPR036628Clp_N_dom_sf