prot_H-paniculata_contig8245.16265.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8245.16265.1
Unique Nameprot_H-paniculata_contig8245.16265.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length340
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8245.16265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 20..59
e-value: 9.5E-10
score: 48.4
coord: 62..101
e-value: 5.6E-6
score: 35.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 63..100
e-value: 0.0054
score: 17.5
coord: 22..59
e-value: 1.1E-8
score: 35.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 69..101
score: 9.138
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 27..68
score: 17.593
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..108
e-value: 1.5E-26
score: 95.6
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 13..103
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 13..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..340
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..20
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.693
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 46..60
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..110
score: 22.86
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 11..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8245contigH-paniculata_contig8245:484..4479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8245.16265.1mRNA_H-paniculata_contig8245.16265.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8245 484..4481 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8245.16265.1 ID=prot_H-paniculata_contig8245.16265.1|Name=mRNA_H-paniculata_contig8245.16265.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=340bp
CVVLCSVLLCSILQVWDARSHQLLQHYPAHDSEVTSISFHNSGNFLLSSS
TDSSLKIWDLREGRLLYTLKGHHGPATASCFSADGTRFASGGENGLVVSW
KSKLFARFGFGVSRASGGTSGVEPAAAGKARVRARGGTGVAGSKATGGGR
AALSLRPTNARVCTAQPRQSPRSSISGVRRSGVYTRGGREDGGGGDGGGR
DTPGVSCRGGGGVNSSLVMEGTRVTNVPTGDEGDRFEDDQQRHQQHEQYH
ASFGFQDVGNDSRAATTASASMTAPLPPPPTPPPPPMASSTRSRAEQSAA
DASTANWANANSNWPDAPTMSAGARESDTPGLEYGWNIGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam