prot_H-paniculata_contig82439.16263.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig82439.16263.1
Unique Nameprot_H-paniculata_contig82439.16263.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length64
Homology
BLAST of mRNA_H-paniculata_contig82439.16263.1 vs. uniprot
Match: G1QPE4_NOMLE (Tetratricopeptide repeat domain 28 n=1 Tax=Nomascus leucogenys TaxID=61853 RepID=G1QPE4_NOMLE)

HSP 1 Score: 107 bits (266), Expect = 1.660e-25
Identity = 49/62 (79.03%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    2 RCIALLRLTLGGLHALSCPHCPMSPSEMNPVPQLEMQKSPVFCVTHTGSCRLELFLFGHLGT 63
            RC+ALL LT G LH LSC HCP  PSEMNPVPQLEMQKSPVFC+ H GSCRL+LFLFGHL T
Sbjct:   70 RCLALLWLTHGALHPLSCTHCPALPSEMNPVPQLEMQKSPVFCIAHAGSCRLKLFLFGHLAT 131          
BLAST of mRNA_H-paniculata_contig82439.16263.1 vs. uniprot
Match: UPI001BB27383 (hypothetical protein n=1 Tax=Chlamydia trachomatis TaxID=813 RepID=UPI001BB27383)

HSP 1 Score: 89.4 bits (220), Expect = 5.010e-22
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:   14 LHALSCPHCPMSPSEMNPVPQLEMQKSPVFCVTHTGSCRLELFLFGHLGT 63
            +H L+C HC   PSEMNPVPQ+EMQKSPVFCV H GSCRLELFLFGHLG+
Sbjct:   12 VHPLTCAHCLALPSEMNPVPQMEMQKSPVFCVAHAGSCRLELFLFGHLGS 61          
BLAST of mRNA_H-paniculata_contig82439.16263.1 vs. uniprot
Match: Q86TZ0_HUMAN (Full-length cDNA clone CS0DC023YN15 of Neuroblastoma of Homo sapiens (human) (Fragment) n=1 Tax=Homo sapiens TaxID=9606 RepID=Q86TZ0_HUMAN)

HSP 1 Score: 88.2 bits (217), Expect = 1.690e-21
Identity = 39/49 (79.59%), Postives = 42/49 (85.71%), Query Frame = 0
Query:   15 HALSCPHCPMSPSEMNPVPQLEMQKSPVFCVTHTGSCRLELFLFGHLGT 63
            H L+C HC   PSEMNPVPQ+EMQKSPVFCV H GSCRLELFLFGHLG+
Sbjct:   25 HPLTCAHCLALPSEMNPVPQMEMQKSPVFCVAHGGSCRLELFLFGHLGS 73          
BLAST of mRNA_H-paniculata_contig82439.16263.1 vs. uniprot
Match: A0A2J8MS18_PANTR (Uncharacterized protein n=1 Tax=Pan troglodytes TaxID=9598 RepID=A0A2J8MS18_PANTR)

HSP 1 Score: 84.0 bits (206), Expect = 9.170e-20
Identity = 37/49 (75.51%), Postives = 40/49 (81.63%), Query Frame = 0
Query:   15 HALSCPHCPMSPSEMNPVPQLEMQKSPVFCVTHTGSCRLELFLFGHLGT 63
            H L+C HC   PSEMNPVPQ+EMQKSPVFCV H GSCR ELFLF HLG+
Sbjct:   13 HPLACAHCLALPSEMNPVPQMEMQKSPVFCVAHAGSCRPELFLFSHLGS 61          
BLAST of mRNA_H-paniculata_contig82439.16263.1 vs. uniprot
Match: A0A2J8PHP6_PANTR (T0008399 isoform 1 n=2 Tax=Pan troglodytes TaxID=9598 RepID=A0A2J8PHP6_PANTR)

HSP 1 Score: 72.8 bits (177), Expect = 2.840e-15
Identity = 32/37 (86.49%), Postives = 34/37 (91.89%), Query Frame = 0
Query:   27 SEMNPVPQLEMQKSPVFCVTHTGSCRLELFLFGHLGT 63
            SEMNPVPQ+EMQKSPVFCV H GSCR ELFLFGHLG+
Sbjct:   49 SEMNPVPQMEMQKSPVFCVAHAGSCRPELFLFGHLGS 85          
BLAST of mRNA_H-paniculata_contig82439.16263.1 vs. uniprot
Match: UPI0018906646 (uncharacterized protein LOC119256547 n=1 Tax=Talpa occidentalis TaxID=50954 RepID=UPI0018906646)

HSP 1 Score: 72.8 bits (177), Expect = 4.610e-15
Identity = 32/37 (86.49%), Postives = 34/37 (91.89%), Query Frame = 0
Query:   27 SEMNPVPQLEMQKSPVFCVTHTGSCRLELFLFGHLGT 63
            SEMNPVPQ+EMQKSPVFCV H GSCR ELFLFGHLG+
Sbjct:   64 SEMNPVPQMEMQKSPVFCVAHAGSCRPELFLFGHLGS 100          
BLAST of mRNA_H-paniculata_contig82439.16263.1 vs. uniprot
Match: B4DRF8_HUMAN (HCG1984907 n=1 Tax=Homo sapiens TaxID=9606 RepID=B4DRF8_HUMAN)

HSP 1 Score: 70.5 bits (171), Expect = 2.630e-14
Identity = 31/41 (75.61%), Postives = 33/41 (80.49%), Query Frame = 0
Query:   15 HALSCPHCPMSPSEMNPVPQLEMQKSPVFCVTHTGSCRLEL 55
            H L+C HC   PSEMNPVPQ+EMQKSPVFCV H GSCR EL
Sbjct:   13 HPLTCAHCLALPSEMNPVPQMEMQKSPVFCVAHAGSCRPEL 53          
BLAST of mRNA_H-paniculata_contig82439.16263.1 vs. uniprot
Match: A0A2J8PMZ2_PANTR (Angiopoietin-1 n=3 Tax=Boreoeutheria TaxID=1437010 RepID=A0A2J8PMZ2_PANTR)

HSP 1 Score: 72.8 bits (177), Expect = 1.800e-13
Identity = 32/37 (86.49%), Postives = 34/37 (91.89%), Query Frame = 0
Query:   27 SEMNPVPQLEMQKSPVFCVTHTGSCRLELFLFGHLGT 63
            SEMNPVPQ+EMQKSPVFCV H GSCR ELFLFGHLG+
Sbjct:  415 SEMNPVPQMEMQKSPVFCVAHAGSCRPELFLFGHLGS 451          
BLAST of mRNA_H-paniculata_contig82439.16263.1 vs. uniprot
Match: D6RHU5_HUMAN (Follistatin-related protein 4 (Fragment) n=1 Tax=Homo sapiens TaxID=9606 RepID=D6RHU5_HUMAN)

HSP 1 Score: 69.3 bits (168), Expect = 2.630e-13
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 0
Query:   29 MNPVPQLEMQKSPVFCVTHTGSCRLELFLFGHLGT 63
            MNPVPQ+EMQKSPVFCV H GSCR ELFLFGHLG+
Sbjct:    1 MNPVPQMEMQKSPVFCVAHAGSCRPELFLFGHLGS 35          
BLAST of mRNA_H-paniculata_contig82439.16263.1 vs. uniprot
Match: A0A2J8PR06_PANTR (Uncharacterized protein n=1 Tax=Pan troglodytes TaxID=9598 RepID=A0A2J8PR06_PANTR)

HSP 1 Score: 64.7 bits (156), Expect = 2.660e-12
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0
Query:   29 MNPVPQLEMQKSPVFCVTHTGSCRLELFLFGHLGT 63
            MNPVPQ+EMQKSP+ CVT  GSCR ELFLFGHLG+
Sbjct:    1 MNPVPQMEMQKSPISCVTQAGSCRPELFLFGHLGS 35          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig82439.16263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G1QPE4_NOMLE1.660e-2579.03Tetratricopeptide repeat domain 28 n=1 Tax=Nomascu... [more]
UPI001BB273835.010e-2278.00hypothetical protein n=1 Tax=Chlamydia trachomatis... [more]
Q86TZ0_HUMAN1.690e-2179.59Full-length cDNA clone CS0DC023YN15 of Neuroblasto... [more]
A0A2J8MS18_PANTR9.170e-2075.51Uncharacterized protein n=1 Tax=Pan troglodytes Ta... [more]
A0A2J8PHP6_PANTR2.840e-1586.49T0008399 isoform 1 n=2 Tax=Pan troglodytes TaxID=9... [more]
UPI00189066464.610e-1586.49uncharacterized protein LOC119256547 n=1 Tax=Talpa... [more]
B4DRF8_HUMAN2.630e-1475.61HCG1984907 n=1 Tax=Homo sapiens TaxID=9606 RepID=B... [more]
A0A2J8PMZ2_PANTR1.800e-1386.49Angiopoietin-1 n=3 Tax=Boreoeutheria TaxID=1437010... [more]
D6RHU5_HUMAN2.630e-1385.71Follistatin-related protein 4 (Fragment) n=1 Tax=H... [more]
A0A2J8PR06_PANTR2.660e-1280.00Uncharacterized protein n=1 Tax=Pan troglodytes Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..63
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.741

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig82439contigH-paniculata_contig82439:295..486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig82439.16263.1mRNA_H-paniculata_contig82439.16263.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig82439 295..508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig82439.16263.1 ID=prot_H-paniculata_contig82439.16263.1|Name=mRNA_H-paniculata_contig82439.16263.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=64bp
MRCIALLRLTLGGLHALSCPHCPMSPSEMNPVPQLEMQKSPVFCVTHTGS
CRLELFLFGHLGT*
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