prot_H-paniculata_contig8225.16247.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8225.16247.1
Unique Nameprot_H-paniculata_contig8225.16247.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length283
Homology
BLAST of mRNA_H-paniculata_contig8225.16247.1 vs. uniprot
Match: A0A6H5KFU5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU5_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 3.940e-38
Identity = 112/302 (37.09%), Postives = 136/302 (45.03%), Query Frame = 0
Query:    1 MKGQFVMPGSDMQRKIAEAMASMLAAGGRAVSGS-----TGGXXXXXXXXXXXSALDNGNTNSGPGNDDYTQI--------------LNDDSDGPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPWSRRVSPKRNGVTPKQRSGAFFIDSEAGKEHSAASHGAHQETERECVICMEDFTKEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYLYFEEHHMVARDISSSSNSRRVGRP-------------------------SSPGVSDEDYQRAFSRVLRAG 258
            +KG+FV+PGSD+QR+IA+AMA +LAAG RA+SG+     TGG               N N + G G + Y +I              L+ DSD  A                                        P   R SP++       R G+  +    G+     + G   E ERECVICME+F KEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYL+FE                                              S   +S+EDY+RAF R LRAG
Sbjct:  196 IKGRFVLPGSDVQRRIADAMAEVLAAGERAMSGTDASGATGGAIGP-----------NRNHSGGGGGEGYREITDRGPQFATCHGDALDSDSDKIAHDDQGQFRLPSSSQPASLDATARGRMMPAGGAIGS-----PSHLRASPRQGTCNEGFRGGSSAVAGLGGRR----APGGEAEEERECVICMEEFCKEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYLFFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEVLSNEDYRRAFRRALRAG 477          
BLAST of mRNA_H-paniculata_contig8225.16247.1 vs. uniprot
Match: D7G9A0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A0_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 2.340e-33
Identity = 61/95 (64.21%), Postives = 71/95 (74.74%), Query Frame = 0
Query:  122 RVSPKRNGVTPKQRSGAFFIDSEAGKEHSAASHGAHQETERECVICMEDFTKEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYLYFE 216
            R SP+R  +    R G+  +    G+     + G   E ERECVICME+F+KEDPEMLTLCSCGVNKTFFHY+CLLQWLSKHSYCPACRGYL+FE
Sbjct:  105 RASPRRGTINEGFRGGSSAVAGLGGRR----APGGEAEEERECVICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFE 195          
BLAST of mRNA_H-paniculata_contig8225.16247.1 vs. uniprot
Match: A0A835Z175_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z175_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.420e-22
Identity = 41/52 (78.85%), Postives = 46/52 (88.46%), Query Frame = 0
Query:  166 ICMEDFTKEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYLYFEE 217
            +C+ +FTKEDPE+LTLCSCG+NKT FHYACLL WL  HSYCPACRG LYFEE
Sbjct:    1 MCLGEFTKEDPEVLTLCSCGMNKTAFHYACLLGWLEHHSYCPACRGELYFEE 52          
BLAST of mRNA_H-paniculata_contig8225.16247.1 vs. uniprot
Match: A0A6U0WDD7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WDD7_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.690e-17
Identity = 32/56 (57.14%), Postives = 46/56 (82.14%), Query Frame = 0
Query:  162 RECVICMEDFTKEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYLYFEE 217
            +ECVICM++FT+++PE+  LC CGVNKT FHY CLL+W+   ++CP CRG ++F+E
Sbjct:  120 KECVICMDEFTEKNPEVPVLCDCGVNKTHFHYHCLLEWMQHRNFCPVCRGSIFFQE 175          
BLAST of mRNA_H-paniculata_contig8225.16247.1 vs. uniprot
Match: A0A7S2CKZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKZ4_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 7.890e-17
Identity = 37/55 (67.27%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  163 ECVICMEDFTKEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYLYFEE 217
            ECVICME F   +P M TLC CGVNKT FHYACLL W  K  +CPAC G LY+EE
Sbjct:   74 ECVICMETFDASNPMMPTLCKCGVNKTCFHYACLLTWKEKQDHCPACYGPLYYEE 128          
BLAST of mRNA_H-paniculata_contig8225.16247.1 vs. uniprot
Match: A0A835YWG5_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG5_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.200e-14
Identity = 32/59 (54.24%), Postives = 47/59 (79.66%), Query Frame = 0
Query:  159 ETERECVICMEDFTKEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYLYFEE 217
            E + ECV+C++ F+ ++P +LTLC+CGVN+  FHYACLLQ+ ++ S CPACR  L++EE
Sbjct:  113 EEQPECVMCLDGFSWDNPAVLTLCACGVNRASFHYACLLQYKARSSRCPACRAELFYEE 171          
BLAST of mRNA_H-paniculata_contig8225.16247.1 vs. uniprot
Match: A0A1V9ZRF8_9STRA (RING-type domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRF8_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 4.700e-14
Identity = 29/57 (50.88%), Postives = 44/57 (77.19%), Query Frame = 0
Query:  161 ERECVICMEDFTKEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYLYFEE 217
            E ECV+C+++F+ ++P++ TLC+CGVN+T FH +CL +W+ +   CP CR  LYFEE
Sbjct:   93 ELECVMCLDNFSDDNPKIRTLCNCGVNRTNFHLSCLYEWVERDRNCPVCRAVLYFEE 149          
BLAST of mRNA_H-paniculata_contig8225.16247.1 vs. uniprot
Match: A0A482RWP0_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWP0_9ARCH)

HSP 1 Score: 74.3 bits (181), Expect = 6.460e-13
Identity = 27/55 (49.09%), Postives = 41/55 (74.55%), Query Frame = 0
Query:  163 ECVICMEDFTKEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYLYFEE 217
            EC+IC+E+FT ++P++ TLC+CG N++ FHY CLL WL   + CP C   ++F+E
Sbjct:   77 ECIICLEEFTTDNPKVKTLCNCGENRSSFHYPCLLYWLEHKASCPNCSSNIFFQE 131          
BLAST of mRNA_H-paniculata_contig8225.16247.1 vs. uniprot
Match: UPI002009335A (E3 ubiquitin-protein ligase At3g02290-like n=6 Tax=Salvia TaxID=21880 RepID=UPI002009335A)

HSP 1 Score: 56.6 bits (135), Expect = 7.190e-6
Identity = 36/113 (31.86%), Postives = 54/113 (47.79%), Query Frame = 0
Query:  120 SRRVSPKRNGVTPKQRSGAFFIDSEAGKEHSA-----------ASHGAH----QETERECVICMEDFTKEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYLYFEE 217
            S  V  +   VT K +   F  + EA KE+S+           A+  AH     E E  C  C+E++TKE+P++LT CS       FH  C+ +W+ +   CP C   + F+E
Sbjct:  119 SSEVDEESESVTTKSKWNEFTCE-EASKEYSSKSSLKPSTAKPATGFAHIYTSSEDEDVCPTCLEEYTKENPKILTQCS-----HHFHLGCIYEWMERSDNCPVCGKVMAFDE 225          
BLAST of mRNA_H-paniculata_contig8225.16247.1 vs. uniprot
Match: A0A803MCR3_CHEQI (RING-type domain-containing protein n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MCR3_CHEQI)

HSP 1 Score: 55.8 bits (133), Expect = 9.430e-6
Identity = 22/57 (38.60%), Postives = 36/57 (63.16%), Query Frame = 0
Query:  161 ERECVICMEDFTKEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYLYFEE 217
            E +C IC+E++T+E+P+MLT C     +  FH  C+L+W+ +   CP C   + F+E
Sbjct:  143 EEDCPICLEEYTEENPKMLTKC-----EHHFHLCCILEWMERSETCPVCDKEMVFDE 194          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8225.16247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KFU5_9PHAE3.940e-3837.09RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G9A0_ECTSI2.340e-3364.21RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z175_9STRA1.420e-2278.85RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A6U0WDD7_9STRA1.690e-1757.14Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2CKZ4_9STRA7.890e-1767.27Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A835YWG5_9STRA3.200e-1454.24RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A1V9ZRF8_9STRA4.700e-1450.88RING-type domain-containing protein n=1 Tax=Thraus... [more]
A0A482RWP0_9ARCH6.460e-1349.09RING-type domain-containing protein n=1 Tax=archae... [more]
UPI002009335A7.190e-631.86E3 ubiquitin-protein ligase At3g02290-like n=6 Tax... [more]
A0A803MCR3_CHEQI9.430e-638.60RING-type domain-containing protein n=3 Tax=Chenop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 163..210
e-value: 4.3E-10
score: 39.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 164..210
score: 10.734
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 131..214
e-value: 6.6E-13
score: 50.1
NoneNo IPR availablePANTHERPTHR45798FAMILY NOT NAMEDcoord: 146..225
NoneNo IPR availablePANTHERPTHR45798:SF35coord: 146..225
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 156..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8225contigH-paniculata_contig8225:2957..9416 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8225.16247.1mRNA_H-paniculata_contig8225.16247.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8225 2926..9462 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8225.16247.1 ID=prot_H-paniculata_contig8225.16247.1|Name=mRNA_H-paniculata_contig8225.16247.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=283bp
MKGQFVMPGSDMQRKIAEAMASMLAAGGRAVSGSTGGGGSGNLGSSGSSA
LDNGNTNSGPGNDDYTQILNDDSDGPASSREEQRRRHDDQQHQDDGIRSI
QRGSSSGGENSNSGGGGPWSRRVSPKRNGVTPKQRSGAFFIDSEAGKEHS
AASHGAHQETERECVICMEDFTKEDPEMLTLCSCGVNKTFFHYACLLQWL
SKHSYCPACRGYLYFEEHHMVARDISSSSNSRRVGRPSSPGVSDEDYQRA
FSRVLRAGSENTSSRGTGSSNDGEDGRRTSNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD