prot_H-paniculata_contig82045.16232.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig82045.16232.1
Unique Nameprot_H-paniculata_contig82045.16232.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length129
Homology
BLAST of mRNA_H-paniculata_contig82045.16232.1 vs. uniprot
Match: UPI0019AF2D74 (Formate--tetrahydrofolate ligase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019AF2D74)

HSP 1 Score: 204 bits (520), Expect = 4.200e-62
Identity = 90/127 (70.87%), Postives = 111/127 (87.40%), Query Frame = 0
Query:    2 EPNDFRFVYSDATPLWDKIREVATRIYHAADIAADDKVRAQIEKFQQSGYGHYPVCIAKTQYSFSTDPKQRGAPTGHRLNIREVRLSAGAEFIVVICGDIFTMPGLPKVPAADAIDIDENGKVSGLF 128
            EPN F+FVY D  PLWDK++ +AT+IY AADI AD KVR QI+K Q+SGYGHYPVC+AKTQYSFSTDP+ RGAP+GH +N+REVRL+AGAEF+V+ICGDI TMPGLPKVP+A  ID+ ++GK++GLF
Sbjct:  304 EPNSFKFVYEDEAPLWDKMKAIATKIYGAADITADSKVRTQIKKLQESGYGHYPVCVAKTQYSFSTDPQLRGAPSGHVVNVREVRLAAGAEFVVMICGDIMTMPGLPKVPSAVNIDVTDDGKITGLF 430          
BLAST of mRNA_H-paniculata_contig82045.16232.1 vs. uniprot
Match: A0A2U1RRB6_9PROT (Formate--tetrahydrofolate ligase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A2U1RRB6_9PROT)

HSP 1 Score: 207 bits (527), Expect = 6.170e-62
Identity = 91/128 (71.09%), Postives = 114/128 (89.06%), Query Frame = 0
Query:    1 EEPNDFRFVYSDATPLWDKIREVATRIYHAADIAADDKVRAQIEKFQQSGYGHYPVCIAKTQYSFSTDPKQRGAPTGHRLNIREVRLSAGAEFIVVICGDIFTMPGLPKVPAADAIDIDENGKVSGLF 128
            E+PNDF+FVY +  PLWDK++ +AT+IY A+DI AD KVR QI+K Q+SGYGHYPVC+AKTQYSFSTDP+ RGAP+GH +N+REVRL+AGAEFIV+ICGDI TMPGLPKVP+A AID++++GK+ GLF
Sbjct:  429 EQPNDFKFVYEEQVPLWDKMKAIATKIYGASDITADSKVRGQIKKLQESGYGHYPVCVAKTQYSFSTDPQLRGAPSGHVVNVREVRLAAGAEFIVMICGDIMTMPGLPKVPSACAIDVNDDGKIVGLF 556          
BLAST of mRNA_H-paniculata_contig82045.16232.1 vs. uniprot
Match: A0A534CFN6_9GAMM (Formate--tetrahydrofolate ligase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534CFN6_9GAMM)

HSP 1 Score: 206 bits (525), Expect = 1.690e-61
Identity = 92/128 (71.88%), Postives = 110/128 (85.94%), Query Frame = 0
Query:    1 EEPNDFRFVYSDATPLWDKIREVATRIYHAADIAADDKVRAQIEKFQQSGYGHYPVCIAKTQYSFSTDPKQRGAPTGHRLNIREVRLSAGAEFIVVICGDIFTMPGLPKVPAADAIDIDENGKVSGLF 128
            E PN F++VY D   LWDK++ +AT+IYHA DI AD KVRAQI + Q++GYGHYPVC+AKTQYSFSTDPK RGAP+ H +NIREVRL+AGAEF+V+ICGDI TMPGLPKVPAA+AID+D NGK+ GLF
Sbjct:  446 ERPNGFKYVYEDRDTLWDKMKAIATKIYHATDITADSKVRAQIRQLQEAGYGHYPVCVAKTQYSFSTDPKLRGAPSHHVVNIREVRLAAGAEFVVMICGDIMTMPGLPKVPAANAIDVDANGKIVGLF 573          
BLAST of mRNA_H-paniculata_contig82045.16232.1 vs. uniprot
Match: A0A1P8FE30_9PROT (Formate--tetrahydrofolate ligase n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A1P8FE30_9PROT)

HSP 1 Score: 204 bits (518), Expect = 1.310e-60
Identity = 88/128 (68.75%), Postives = 115/128 (89.84%), Query Frame = 0
Query:    1 EEPNDFRFVYSDATPLWDKIREVATRIYHAADIAADDKVRAQIEKFQQSGYGHYPVCIAKTQYSFSTDPKQRGAPTGHRLNIREVRLSAGAEFIVVICGDIFTMPGLPKVPAADAIDIDENGKVSGLF 128
            E+P+DF+FVY ++ PLWDK++ +AT+IY A+DI AD K+RAQI+K Q+SGYGHYPVC+AKTQYSFSTDP+ RGAP+GH + IREVRL+AGAEF+V++CGDI TMPGLPKVP+A +IDI ++GK++GLF
Sbjct:  429 EQPSDFKFVYEESLPLWDKMKAIATKIYGASDITADSKIRAQIKKLQESGYGHYPVCVAKTQYSFSTDPQLRGAPSGHIVTIREVRLAAGAEFVVMVCGDIMTMPGLPKVPSAVSIDITDDGKITGLF 556          
BLAST of mRNA_H-paniculata_contig82045.16232.1 vs. uniprot
Match: A0A1F4B9V2_9PROT (Formate--tetrahydrofolate ligase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4B9V2_9PROT)

HSP 1 Score: 201 bits (511), Expect = 1.440e-59
Identity = 88/126 (69.84%), Postives = 110/126 (87.30%), Query Frame = 0
Query:    3 PNDFRFVYSDATPLWDKIREVATRIYHAADIAADDKVRAQIEKFQQSGYGHYPVCIAKTQYSFSTDPKQRGAPTGHRLNIREVRLSAGAEFIVVICGDIFTMPGLPKVPAADAIDIDENGKVSGLF 128
            P+DF++VY DA PLWDKIR +AT+IY AAD+ AD K+R QI+K Q+ GYG YPVC+AKTQYSFSTDP+ RGAP+GH +NIREVRL+AGAEFIV++CGD+ TMPGLPKVP+A+ ID+ ++GKV GLF
Sbjct:  432 PSDFKYVYDDAIPLWDKIRTIATKIYGAADVTADAKIRGQIKKLQEDGYGSYPVCVAKTQYSFSTDPQLRGAPSGHVINIREVRLAAGAEFIVMVCGDVMTMPGLPKVPSAEKIDLTDDGKVVGLF 557          
BLAST of mRNA_H-paniculata_contig82045.16232.1 vs. uniprot
Match: A0A838JMG5_9BURK (Formate--tetrahydrofolate ligase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A838JMG5_9BURK)

HSP 1 Score: 194 bits (494), Expect = 1.450e-59
Identity = 82/124 (66.13%), Postives = 107/124 (86.29%), Query Frame = 0
Query:    5 DFRFVYSDATPLWDKIREVATRIYHAADIAADDKVRAQIEKFQQSGYGHYPVCIAKTQYSFSTDPKQRGAPTGHRLNIREVRLSAGAEFIVVICGDIFTMPGLPKVPAADAIDIDENGKVSGLF 128
            DF+FVY +  PLW+K++ +AT+IY A+D+ AD K+RAQI+K Q+ GYGHYP+C+AKTQYSFSTDP+ RGAP+GH + IREVRL AGAEFIV++CGDI TMPGLPKVP+A++ID+ + GK+ GLF
Sbjct:  187 DFKFVYEENAPLWEKVKTIATKIYGASDVTADSKIRAQIKKLQEDGYGHYPICVAKTQYSFSTDPQLRGAPSGHVITIREVRLQAGAEFIVMVCGDIMTMPGLPKVPSANSIDVTDEGKILGLF 310          
BLAST of mRNA_H-paniculata_contig82045.16232.1 vs. uniprot
Match: A0A1Q6WTF1_9GAMM (Formate--tetrahydrofolate ligase n=17 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A1Q6WTF1_9GAMM)

HSP 1 Score: 201 bits (511), Expect = 1.770e-59
Identity = 88/127 (69.29%), Postives = 108/127 (85.04%), Query Frame = 0
Query:    2 EPNDFRFVYSDATPLWDKIREVATRIYHAADIAADDKVRAQIEKFQQSGYGHYPVCIAKTQYSFSTDPKQRGAPTGHRLNIREVRLSAGAEFIVVICGDIFTMPGLPKVPAADAIDIDENGKVSGLF 128
            EPN FRFVY D+  LWDK++ +AT++YHA DI AD KVRAQI   Q+SGYGHYPVC+AKTQYSFSTDPK RGAP  H +NIREVRL+AGAEF+++ICGDI TMPGLPK+PAA+ ID+  +G+++GLF
Sbjct:  442 EPNGFRFVYEDSATLWDKMKAIATKVYHATDITADTKVRAQIRHLQESGYGHYPVCVAKTQYSFSTDPKLRGAPAHHVVNIREVRLAAGAEFVIMICGDIMTMPGLPKLPAANNIDVSADGRITGLF 568          
BLAST of mRNA_H-paniculata_contig82045.16232.1 vs. uniprot
Match: A0A1V6FJ12_9PROT (Formate--tetrahydrofolate ligase n=1 Tax=Alphaproteobacteria bacterium ADurb.Bin100 TaxID=1852791 RepID=A0A1V6FJ12_9PROT)

HSP 1 Score: 191 bits (485), Expect = 3.440e-59
Identity = 84/122 (68.85%), Postives = 106/122 (86.89%), Query Frame = 0
Query:    7 RFVYSDATPLWDKIREVATRIYHAADIAADDKVRAQIEKFQQSGYGHYPVCIAKTQYSFSTDPKQRGAPTGHRLNIREVRLSAGAEFIVVICGDIFTMPGLPKVPAADAIDIDENGKVSGLF 128
            RFVY DA  LW+K++ +AT+IY A+DI+AD  VRA+I + QQ GYGHYPVC+AKTQYSFSTDPK+RGAP+GH +NIR+VRL+AGAEF+V+ICGDI TMPGLP+ PA+  IDID+ G++SGLF
Sbjct:  112 RFVYEDADSLWNKMKAIATQIYGASDISADSAVRARIARLQQEGYGHYPVCVAKTQYSFSTDPKRRGAPSGHMVNIRDVRLAAGAEFVVMICGDILTMPGLPREPASSRIDIDDEGRISGLF 233          
BLAST of mRNA_H-paniculata_contig82045.16232.1 vs. uniprot
Match: A0A1E4PNH6_9BURK (Formate--tetrahydrofolate ligase n=1 Tax=Rubrivivax sp. SCN 70-15 TaxID=1660139 RepID=A0A1E4PNH6_9BURK)

HSP 1 Score: 200 bits (508), Expect = 4.060e-59
Identity = 91/123 (73.98%), Postives = 109/123 (88.62%), Query Frame = 0
Query:    6 FRFVYSDATPLWDKIREVATRIYHAADIAADDKVRAQIEKFQQSGYGHYPVCIAKTQYSFSTDPKQRGAPTGHRLNIREVRLSAGAEFIVVICGDIFTMPGLPKVPAADAIDIDENGKVSGLF 128
            FRFVY DA PLWDK+R+VAT++Y AADI+A   VRAQI+  Q SGYGHYPVC+AKTQYSFSTDPKQRGAP+GH ++IREVRL+AGAEFIV++CGDI TMPGLPKVP+A+ ID+ E+G+V GLF
Sbjct:  436 FRFVYDDADPLWDKMRKVATQVYGAADISAAADVRAQIQSLQDSGYGHYPVCVAKTQYSFSTDPKQRGAPSGHVVDIREVRLAAGAEFIVLVCGDIMTMPGLPKVPSAEVIDLTEDGRVVGLF 558          
BLAST of mRNA_H-paniculata_contig82045.16232.1 vs. uniprot
Match: A0A3N5X1E2_9PROT (Formate--tetrahydrofolate ligase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5X1E2_9PROT)

HSP 1 Score: 199 bits (505), Expect = 1.080e-58
Identity = 87/126 (69.05%), Postives = 109/126 (86.51%), Query Frame = 0
Query:    3 PNDFRFVYSDATPLWDKIREVATRIYHAADIAADDKVRAQIEKFQQSGYGHYPVCIAKTQYSFSTDPKQRGAPTGHRLNIREVRLSAGAEFIVVICGDIFTMPGLPKVPAADAIDIDENGKVSGLF 128
            P++F+FVY D  PLWDKI+ +AT+IY AAD+ AD KVR QI+K Q+ GYGHYPVC+AKTQYSFSTD + RGAP+GH +NIREVRL+AGAEFIV++CGDI TMPGLPKVP+++ ID+++ GKV GLF
Sbjct:  431 PSNFKFVYEDELPLWDKIKAIATKIYGAADVTADGKVRTQIKKLQEDGYGHYPVCVAKTQYSFSTDAQLRGAPSGHMINIREVRLAAGAEFIVMVCGDIMTMPGLPKVPSSERIDLNDEGKVVGLF 556          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig82045.16232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019AF2D744.200e-6270.87Formate--tetrahydrofolate ligase n=1 Tax=Burkholde... [more]
A0A2U1RRB6_9PROT6.170e-6271.09Formate--tetrahydrofolate ligase n=1 Tax=Betaprote... [more]
A0A534CFN6_9GAMM1.690e-6171.88Formate--tetrahydrofolate ligase n=1 Tax=Gammaprot... [more]
A0A1P8FE30_9PROT1.310e-6068.75Formate--tetrahydrofolate ligase n=3 Tax=Betaprote... [more]
A0A1F4B9V2_9PROT1.440e-5969.84Formate--tetrahydrofolate ligase n=1 Tax=Betaprote... [more]
A0A838JMG5_9BURK1.450e-5966.13Formate--tetrahydrofolate ligase n=1 Tax=Burkholde... [more]
A0A1Q6WTF1_9GAMM1.770e-5969.29Formate--tetrahydrofolate ligase n=17 Tax=unclassi... [more]
A0A1V6FJ12_9PROT3.440e-5968.85Formate--tetrahydrofolate ligase n=1 Tax=Alphaprot... [more]
A0A1E4PNH6_9BURK4.060e-5973.98Formate--tetrahydrofolate ligase n=1 Tax=Rubriviva... [more]
A0A3N5X1E2_9PROT1.080e-5869.05Formate--tetrahydrofolate ligase n=1 Tax=Betaprote... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000559Formate-tetrahydrofolate ligase, FTHFSPFAMPF01268FTHFScoord: 3..128
e-value: 1.1E-47
score: 162.5
NoneNo IPR availableGENE3D3.10.410.10coord: 16..104
e-value: 3.0E-34
score: 118.8
NoneNo IPR availablePANTHERPTHR43274:SF6coord: 2..128
NoneNo IPR availablePANTHERPTHR43274FAMILY NOT NAMEDcoord: 2..128
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig82045contigH-paniculata_contig82045:127..513 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig82045.16232.1mRNA_H-paniculata_contig82045.16232.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig82045 127..513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig82045.16232.1 ID=prot_H-paniculata_contig82045.16232.1|Name=mRNA_H-paniculata_contig82045.16232.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp
EEPNDFRFVYSDATPLWDKIREVATRIYHAADIAADDKVRAQIEKFQQSG
YGHYPVCIAKTQYSFSTDPKQRGAPTGHRLNIREVRLSAGAEFIVVICGD
IFTMPGLPKVPAADAIDIDENGKVSGLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000559Formate_THF_ligase
IPR027417P-loop_NTPase