prot_H-paniculata_contig8204.16231.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8204.16231.1
Unique Nameprot_H-paniculata_contig8204.16231.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length138
Homology
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BLAST of mRNA_H-paniculata_contig8204.16231.1 vs. uniprot
Match: A0A6H5L874_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L874_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 3.750e-5
Identity = 67/140 (47.86%), Postives = 84/140 (60.00%), Query Frame = 0 
Query:    1 SEDGAGIYSVAGYDTIRNSNFTYNAAGSSGGGIVHSGVLKELSXXXXXXXXXXXXXXXXXXXXXXXXXXXVEFNGNHRICDLGYYSGQGEAMEGD--CRFAAVCARCTSACGTELEEAAITEDPKNIVPVCLACPEGSTT 138
            SEDG  IYSVAG+D ++ S F +                    XXXXXXXXXXXXXXXXXXXXXXXXXXX         C+ G +S + E +EG+  CRF  VC+RC S CG+EL++     DP +++P C A PEG+ T
Sbjct:  308 SEDGGAIYSVAGFDMVKESTFFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFYCEEGTFSTEVE-IEGEEVCRFGRVCSRCASECGSELQDEVTVADP-DLLPACEAVPEGAQT 445
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8204.16231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L874_9PHAE3.750e-547.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8204contigH-paniculata_contig8204:5616..9121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8204.16231.1mRNA_H-paniculata_contig8204.16231.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8204 5616..9121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8204.16231.1 ID=prot_H-paniculata_contig8204.16231.1|Name=mRNA_H-paniculata_contig8204.16231.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp
SEDGAGIYSVAGYDTIRNSNFTYNAAGSSGGGIVHSGVLKELSDSRFSEN
GAAHEGPAVLSLGQLAILSKVEFNGNHRICDLGYYSGQGEAMEGDCRFAA
VCARCTSACGTELEEAAITEDPKNIVPVCLACPEGSTT
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