prot_H-paniculata_contig8197.16219.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8197.16219.1
Unique Nameprot_H-paniculata_contig8197.16219.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length243
Homology
BLAST of mRNA_H-paniculata_contig8197.16219.1 vs. uniprot
Match: A0A6H5JLN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN7_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.300e-15
Identity = 53/150 (35.33%), Postives = 88/150 (58.67%), Query Frame = 0
Query:   11 VQVNYGSQTRRTRLVKL-----HSTCSAKQQVLRERDQSLDGASFAVRWHHDVDIQDNENQETIEIALLMDIECNRGKIRRKLFRHSITTIEMRTFRSKLDQRINLSRPLRSLSSVED-HEVGCLQMNATYTDDYCVNQGYLFGLFCGLT 154
            V + +GSQ  R +   L     +ST  +  +  R    ++ G+      + +V+ +D    E +E+A+L D+   R   +R+LFRHSI +I++  FR++ ++R+ L  PL+ ++S  D  + G +Q++  YTDD CV QGY+FGLFCGLT
Sbjct:   32 VHLRHGSQEHRAQFTALPSSKNNSTTPSLSEPRRTDLVTISGSPS----NEEVEFEDKGVGEKVEVAVLFDLIA-REMPKRQLFRHSIASIDLDAFRAQPEKRVELWLPLQPVNSGNDLRDYGSIQISIMYTDD-CVTQGYMFGLFCGLT 175          
BLAST of mRNA_H-paniculata_contig8197.16219.1 vs. uniprot
Match: A0A6H5JN36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN36_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.030e-13
Identity = 39/110 (35.45%), Postives = 66/110 (60.00%), Query Frame = 0
Query:   54 WHHDVDIQDNENQETIEIALLMDIECNRGKIRRKLFRHSITTIEMRTFRSKLDQRINLSRPLRSLSSV-------EDHEVGCLQMNATYTDDYCVNQGYLFGLFCGLTHL 156
            W  +V+++D E+Q+T++IAL+ ++       +R+ F HS+  I +  FRS+ D+ + L +PLR + +         +H+VG +Q+  TY  D CV++GY F  FCGL  L
Sbjct:   33 WPEEVEVEDREDQDTVQIALVFELAPT-ATAQRESFCHSVGAINVGEFRSRPDETVTLWKPLRPVEASPHKDSLDSNHDVGAVQIAITYYSDDCVDEGYTFAAFCGLVPL 141          
BLAST of mRNA_H-paniculata_contig8197.16219.1 vs. uniprot
Match: D7FL67_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL67_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 4.170e-8
Identity = 37/113 (32.74%), Postives = 62/113 (54.87%), Query Frame = 0
Query:   40 ERDQSLDGASFAVRWHHDVDIQDNENQETIEIALLMDIECNRGKIRRKLFRHSITTIEMRTFRSKLDQRINLSRPLRSLS-----SVE---DHEVGCLQMNATYTDDYCVNQG 144
            ER  + +  +    W   V+++D E Q+TI++A+++++     K R K   HSIT I++   R +  +++ L RPL SL      S++   DH  G +Q+  TY  D CV+QG
Sbjct:   68 ERGTAANSTAARPVWPEQVEVEDREGQDTIQVAVVLELASTATKPREKCC-HSITMIDVLDVRLRPGEKVTLWRPLHSLGASTQDSIDNDGDHGFGEIQIAVTYNTDDCVDQG 179          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8197.16219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JLN7_9PHAE1.300e-1535.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN36_9PHAE1.030e-1335.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL67_ECTSI4.170e-832.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8197contigH-paniculata_contig8197:2063..9412 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8197.16219.1mRNA_H-paniculata_contig8197.16219.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8197 950..9425 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8197.16219.1 ID=prot_H-paniculata_contig8197.16219.1|Name=mRNA_H-paniculata_contig8197.16219.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=243bp
MRNDGFVEVGVQVNYGSQTRRTRLVKLHSTCSAKQQVLRERDQSLDGASF
AVRWHHDVDIQDNENQETIEIALLMDIECNRGKIRRKLFRHSITTIEMRT
FRSKLDQRINLSRPLRSLSSVEDHEVGCLQMNATYTDDYCVNQGYLFGLF
CGLTHLFDTPTRDSNLPSIPYTMECFKDALLADDLALTSSSPKADDKHGK
TRDAAAAETTPSVLSRLIRMPQFTNQNTIILSPPDSPNRGWR*
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