prot_H-paniculata_contig819.16209.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig819.16209.1
Unique Nameprot_H-paniculata_contig819.16209.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length389
Homology
BLAST of mRNA_H-paniculata_contig819.16209.1 vs. uniprot
Match: D8LR74_ECTSI (Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR74_ECTSI)

HSP 1 Score: 458 bits (1178), Expect = 3.150e-144
Identity = 254/384 (66.15%), Postives = 287/384 (74.74%), Query Frame = 0
Query:    5 SVSDENKIRTFSSRPFVMMPKATPPLCQPGEEEGEDGRLDVVKRLFKPYKGDLFGNSGKDNTQGMLYLSRMDPSRDPKKTRLETSELKR-RSLAHLGVKEEGDDVAEEEAHRAAGEERRRRLAISLETLSRKPDKRADVVTNGGVVALAKLSRSEESGTRSSCAQAFNSLATEFNLRSHMLEQGAAPAVIALAISSHNRMLRGECVETLCKLAVIPGSEAQIMAEGGIACLLAVQRAVPSLGELVSTVEEDEVLEVLLIQFLCNLSGFKNNQQKLVEEGAVRIIARAAKRTTSVDVIRLCASTLCNFAGDGRARPKMSDQRTTQALLDLTKHDDLGVKREVAHTVARLAADASCRENLLQYGIIPILVTMSMGSDVDTATGRQV 387
            S SDE   R     P +        +  PG  EG + +  VVK LFKPY+GDLFGNSGKDNTQGMLYLSRMDPSRDPKKTR++T+E +R RSLA  G KE  D VAE+EAHRAAGEERRRRLAISL TLS+KP+KRA+VV NGGV ALAKLSRSEES TRSSCA+ FN+LATE +LR  M+E+GAAPA+IALA S                                     AVQRAVPSLG L  TVEEDE LE LLIQ LCNLSGFKNNQ KLVEEGA+RII+RAA+RT SVDV+RLCASTLCNFAG+GRARPKMSD RT QALL+LTKH+D+G++REVAHT+ARLAADASCRE +LQYGIIPILVTMS   D+DT TGR +
Sbjct:   40 SASDEKTRRASKRTPPLTKGSLPAAVSTPGLGEGRE-QFHVVKSLFKPYQGDLFGNSGKDNTQGMLYLSRMDPSRDPKKTRVDTAEEQRHRSLAQYGAKEGEDFVAEQEAHRAAGEERRRRLAISLATLSKKPEKRANVVANGGVAALAKLSRSEESRTRSSCAEVFNNLATERSLRQRMIEEGAAPAIIALAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQRAVPSLGGLAGTVEEDESLERLLIQLLCNLSGFKNNQLKLVEEGAIRIISRAAERTASVDVVRLCASTLCNFAGEGRARPKMSDSRTAQALLNLTKHEDIGIRREVAHTIARLAADASCREKILQYGIIPILVTMSTAPDLDTTTGRCI 422          
BLAST of mRNA_H-paniculata_contig819.16209.1 vs. uniprot
Match: A0A6H5KQD4_9PHAE (Vacuolar protein 8 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD4_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 1.320e-45
Identity = 84/109 (77.06%), Postives = 98/109 (89.91%), Query Frame = 0
Query:  279 VEEGAVRIIARAAKRTTSVDVIRLCASTLCNFAGDGRARPKMSDQRTTQALLDLTKHDDLGVKREVAHTVARLAADASCRENLLQYGIIPILVTMSMGSDVDTATGRQV 387
            VEEGA+RII+RAA+RT SVDV+RLCA TLCNFAG+GRARPKMSD RT QALL+LTKH+D+G++REVAHT+ARLAADASCRE +LQYGIIPILVTMS   D+D  TGR +
Sbjct:   22 VEEGAIRIISRAAERTASVDVVRLCARTLCNFAGEGRARPKMSDSRTAQALLNLTKHEDIGIRREVAHTIARLAADASCREKILQYGIIPILVTMSTAPDLDATTGRCI 130          
BLAST of mRNA_H-paniculata_contig819.16209.1 vs. uniprot
Match: F0YJH6_AURAN (Vacuolar protein 8 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJH6_AURAN)

HSP 1 Score: 150 bits (380), Expect = 3.840e-36
Identity = 121/387 (31.27%), Postives = 170/387 (43.93%), Query Frame = 0
Query:   44 DVVKRLFKPYKGDLFGNSGK------DNTQGMLYLSRMDPSRDPKKTRLETSELKRRSLAHLGVKEEGDDVAEEEAHRAAGEERRRRLAISLETLSRKPDKRADVVTNGGVVALAKLSRSEESGTRSSCAQAFNSLATEFNLRSHMLEQGAAPAVIALAISSHNRMLRGECVETLCKL-----------------------AVIPGSEAQIMAEGGIACLLAVQRAVPSLGELVSTVEEDEV---LEVLLIQFLCNLSGFKNNQQKLVEEGAVRIIARAAKRTTSV-------------DVIRLCASTLCNFAGDGRARPKMSDQRTTQALLDLTKHDDLGVKREVAHTVARLAADASCRENLLQYGIIPILVTMSMGSDVDTATGR 385
            D +K+LFKPY+GDLF +S        DN+ G+LYLSRM+P  DP K R +   +  R       KE+G  VA  +   A    + RR A+SL TLS    +R  +V +G V AL  L R E+  T+ SCA A  +LA E +L                                                           A I   E  ++    ++C+  +   +  L   +  +    +   +E +L+  LCNLS  KNNQ +LVEEGAVRI+ R  +   +              +   LCA TL N +   R+R KM+ QR    LLD+ K  D  +K+  A T+ RLA D SC E ++  G +  +VTMS     D  TGR
Sbjct:   71 DRIKKLFKPYRGDLFSSSALAAHSPGDNSGGLLYLSRMNPDADPNKGRRKRM-MPERQKDEERTKEDGTQVAYSQEFVAYRSNKLRRFAVSLATLSTNGLERRSLVADGAVHALVALCREEDPITKMSCAMALRNLANEKDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMASASIHAMETILLTLCNLSCVEDMYSHIEDLNSAIVQLSNFSMSGRMEQMLVGCLCNLSCLKNNQGRLVEEGAVRIVNRIFRAAVAGRPWVKPGRDQVLHETTLLCAKTLSNLSSCSRSRSKMTAQRVIIVLLDMAKLADEDIKQSCALTITRLAMDVSCCEKIIHQGAMTAIVTMSQCGSKDIITGR 456          
BLAST of mRNA_H-paniculata_contig819.16209.1 vs. uniprot
Match: A0A835YT74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT74_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.460e-17
Identity = 71/202 (35.15%), Postives = 97/202 (48.02%), Query Frame = 0
Query:   75 MDPSRDPKKTRLETSELKR---RSLAHLGVKEEGDDVAEEEAHRAAGEERRRRLAISLETLSRK-----------------------------------PDKRADVVTNGGVVALAKLSRSEESGTRSSCAQAFNSLATEFNLRSHMLEQGAAPAVIALAISSHNRMLRGECVETLCKLAVIPGSEAQIMAEGGIACLLAVQ 238
            MDP R+  K R E         +S++    ++  +D + + A  AA EERR RLAIS+ TL+RK                                   PDKRA++V  G V AL KLS S +S TR SC +AFN+LA+                   +A  SHN+ L+ ECVE LCKLA +PG+E  +   G I+C++ VQ
Sbjct:    1 MDPMRNTHKARREXXXXXXXXXQSVSAAQARDSVNDSSAQPAGHAASEERRCRLAISMATLTRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDKRAELVRQGAVAALIKLSNSADSRTRLSCCRAFNNLASXXXXXXXXXXXXXXXXXXXMAGFSHNKALKRECVEALCKLAALPGAEVDLARAGVISCVMHVQ 202          
BLAST of mRNA_H-paniculata_contig819.16209.1 vs. uniprot
Match: A0A835Z1D1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1D1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.800e-10
Identity = 58/184 (31.52%), Postives = 77/184 (41.85%), Query Frame = 0
Query:  246 ELVSTVEEDEVLEVLLIQFLCNLSGFKNNQQKLVEEGAVRIIARAA--------------------------KRTTSVDV------------------------------------IRLCASTLCNFAGDGRARPKMSDQRTTQALLDLTKHDDLGVKREV--AHTVARLA-----ADASCREN 360
            +L   V+    LE+LL++ LCNLS F  NQQ+L E+G +RI  +A                           KR +S+ +                                    +RLCA +LCNFAG  R+RPKMSDQRT +ALL L +   + V R    AH V   A     AD  C +N
Sbjct:   65 QLAPAVQGRADLELLLMKLLCNLSSFSTNQQRLAEDGGIRIAVQAVHNAAAIXXXXXXXXXXXXXXXPLPTRKRQSSIPLASFDATVCTAAACDGSYAGXXXXXXXXXIAGVAAASLRLCARSLCNFAGGARSRPKMSDQRTVRALLVLVQ---VRVARSSCGAHAVTEAAPQSDSADTGCLQN 245          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig819.16209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LR74_ECTSI3.150e-14466.15Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5KQD4_9PHAE1.320e-4577.06Vacuolar protein 8 n=1 Tax=Ectocarpus sp. CCAP 131... [more]
F0YJH6_AURAN3.840e-3631.27Vacuolar protein 8 n=1 Tax=Aureococcus anophageffe... [more]
A0A835YT74_9STRA1.460e-1735.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z1D1_9STRA1.800e-1031.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 238..383
e-value: 5.5E-16
score: 60.6
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 107..237
e-value: 8.8E-10
score: 40.4
NoneNo IPR availablePANTHERPTHR15599RTDR1coord: 299..379
coord: 119..290
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 121..374

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig819contigH-paniculata_contig819:14236..18445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig819.16209.1mRNA_H-paniculata_contig819.16209.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig819 14152..22251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig819.16209.1 ID=prot_H-paniculata_contig819.16209.1|Name=mRNA_H-paniculata_contig819.16209.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=389bp
MATTSVSDENKIRTFSSRPFVMMPKATPPLCQPGEEEGEDGRLDVVKRLF
KPYKGDLFGNSGKDNTQGMLYLSRMDPSRDPKKTRLETSELKRRSLAHLG
VKEEGDDVAEEEAHRAAGEERRRRLAISLETLSRKPDKRADVVTNGGVVA
LAKLSRSEESGTRSSCAQAFNSLATEFNLRSHMLEQGAAPAVIALAISSH
NRMLRGECVETLCKLAVIPGSEAQIMAEGGIACLLAVQRAVPSLGELVST
VEEDEVLEVLLIQFLCNLSGFKNNQQKLVEEGAVRIIARAAKRTTSVDVI
RLCASTLCNFAGDGRARPKMSDQRTTQALLDLTKHDDLGVKREVAHTVAR
LAADASCRENLLQYGIIPILVTMSMGSDVDTATGRQVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold