prot_H-paniculata_contig8141.16163.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8141.16163.1
Unique Nameprot_H-paniculata_contig8141.16163.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length663
Homology
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BLAST of mRNA_H-paniculata_contig8141.16163.1 vs. uniprot
Match: A0A6H5LNS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNS9_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 6.440e-8
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 0 
Query:  450 VLAVAANLAPVCVSRRLLSSSTYQQVALARQAGDAVRAGLTFVAEEELD 498
            V+AVAANLAPVCVSR+LLS   Y+++ALARQAGD V AGLTF  EE  D
Sbjct: 1446 VVAVAANLAPVCVSRQLLSEGAYRRLALARQAGDDVEAGLTFEPEEGYD 1494
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BLAST of mRNA_H-paniculata_contig8141.16163.1 vs. uniprot
Match: D8LPQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPQ7_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 6.460e-8
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 0 
Query:  450 VLAVAANLAPVCVSRRLLSSSTYQQVALARQAGDAVRAGLTFVAEEELD 498
            V+AVAANLAPVCVSR+LLS   Y+++ALARQAGD V AGLTF  EE  D
Sbjct: 1484 VVAVAANLAPVCVSRQLLSEGAYRRLALARQAGDDVEAGLTFEPEEGYD 1532
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8141.16163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LNS9_9PHAE6.440e-871.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPQ7_ECTSI6.460e-871.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8141contigH-paniculata_contig8141:455..7210 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8141.16163.1mRNA_H-paniculata_contig8141.16163.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8141 455..7212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8141.16163.1 ID=prot_H-paniculata_contig8141.16163.1|Name=mRNA_H-paniculata_contig8141.16163.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=663bp
GPGPRGSDRPSGGPDRGAGPGSNSKRIGGGGPGMLDPHGGHARMPIQGRG
GPGFPPGMWGPRGPPPPGHPAWNDPVFLRQMRQQANGTGAPVGGGGNGGI
NGRGQDDRGPSSPPPPPPWATEAAAGGGGASTRGGGFRGGPLPGGPGGPG
QPPPPTQVQGGAAPASGMHRPPQGAQGAAAAGGPGGVPGRGGDVGGTGRG
GSEGGGMNSRGAPPPDGEGQGGHWRPPPLGVRRGGVPWEGGPGNGPPRGR
PTWEGGRGGPNEGGPGPDGRIQQGNWDPRRGRFSRSDSRERGWGPGGGAG
GATGAMDGDRNNFDNNLGRPYGRRSRSRSGSRSRHRRIGAGEGSGGGYGP
GPGGGDPRGPPGRGAPAGMPMHQDWQQHPGHHSQTPQALDFRGEGMEERR
EGALREGMANAGPTATAAAAAAAMVVEDGEGREDSGAGGAAQQQEDDPIV
LAVAANLAPVCVSRRLLSSSTYQQVALARQAGDAVRAGLTFVAEEELDDD
DHDSDGGTGADGQDGGGDDGSKDDASIAGGGGVKVEAALDEVASAGGDGV
LDNDAMSADPQQDQHDPQNAAAPPPPPPPAAAETAAPQQQHHNAQLDEDD
LYDDLYGGLDSHDDAAIGGSGGGGGGDPTMIKSEGGGEGEGNSTGIEGGD
GLGGEGGGAGDGR
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