prot_H-paniculata_contig81401.16162.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig81401.16162.1 vs. uniprot
Match: W7T0T3_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0T3_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.060e-18 Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 0
Query: 1 LRKSLYDLKQSGRNWNNTLDDFLVGIGLQRLTTNPCLYFSRTDGGETNNVVAVYVDNLVIVGR-REKVDEFKHDISQCFRIKDLGSLSRVLGIEVRRD 97
LRKSLY LKQSGRNW+ +D + G G + +PCLY GE V+ +YVD+L+I RE V++FKH IS+ F +KDL L +LG+ ++RD
Sbjct: 561 LRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEIL-VIVLYVDDLIITSNSREMVNKFKHAISREFSMKDLKELDWILGMAIKRD 657
BLAST of mRNA_H-paniculata_contig81401.16162.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.590e-18 Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = 0
Query: 1 LRKSLYDLKQSGRNWNNTLDDFLVGIGLQRLTTNPCLYFSRTDGGETNNVVAVYVDNLVIVGR-REKVDEFKHDISQCFRIKDLGSLSRVLGIEVRRD 97
LRKSLY LKQSGRNW+ +D + G G + +PCLY GE V+ +YVD+L+I RE V +FKH IS+ F +KDL L +LG+ ++RD
Sbjct: 121 LRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEIL-VIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRD 217
BLAST of mRNA_H-paniculata_contig81401.16162.1 vs. uniprot
Match: W7TIV7_9STRA (Transposable element n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIV7_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 3.220e-18 Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 0
Query: 1 LRKSLYDLKQSGRNWNNTLDDFLVGIGLQRLTTNPCLYFSRTDGGETNNVVAVYVDNLVIVGR-REKVDEFKHDISQCFRIKDLGSLSRVLGIEVRRD 97
LRKSLY LKQSGRNW+ +D + G G + +PCLY GE V+ +YVD+L+I R+ VD FK IS F +KDL L +LGI ++RD
Sbjct: 183 LRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEIL-VIVLYVDDLIIASNSRDMVDNFKQAISMKFSMKDLKELDWILGIAIKRD 279
BLAST of mRNA_H-paniculata_contig81401.16162.1 vs. uniprot
Match: W7TII5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TII5_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 5.450e-18 Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 0
Query: 1 LRKSLYDLKQSGRNWNNTLDDFLVGIGLQRLTTNPCLYFSRTDGGETNNVVAVYVDNLVIVGR-REKVDEFKHDISQCFRIKDLGSLSRVLGIEVRRD 97
LRKSLY LKQSGRNW+ +D + G G + +PCLY GE V+ +YVD+L+I G R+ VD+FK IS+ +KDL L +LG+ ++R+
Sbjct: 121 LRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSADPCLYVKFGSSGEML-VIVLYVDDLIIAGNSRDMVDDFKQAISKEISMKDLKELDWILGMAIKRN 217
BLAST of mRNA_H-paniculata_contig81401.16162.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA) HSP 1 Score: 86.7 bits (213), Expect = 9.510e-18 Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 0
Query: 1 LRKSLYDLKQSGRNWNNTLDDFLVGIGLQRLTTNPCLYFSRTDGGETNNVVAVYVDNLVIVGRRE-KVDEFKHDISQCFRIKDLGSLSRVLGIEVRRD 97
L+K++Y LKQSGR WNNTLD+ L +G +R CLY + G ++ +AVYVD+L+I+ E ++ K IS F + D GSLS LG+E++RD
Sbjct: 963 LKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQG--SSYIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRD 1058
BLAST of mRNA_H-paniculata_contig81401.16162.1 vs. uniprot
Match: W7TIM1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIM1_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.280e-17 Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 0
Query: 1 LRKSLYDLKQSGRNWNNTLDDFLVGIGLQRLTTNPCLYFSRTDGGETNNVVAVYVDNLVIVGR-REKVDEFKHDISQCFRIKDLGSLSRVLGIEVRRD 97
LRKSLY LKQSGRNW+ +D + G G + +PCLY GE V+ +YVD+L+I RE VD+FK IS+ F +KDL L +LG+ ++R+
Sbjct: 350 LRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEML-VIVLYVDDLIITSNSREMVDKFKQAISREFSMKDLKELDWILGMAIKRN 446
BLAST of mRNA_H-paniculata_contig81401.16162.1 vs. uniprot
Match: A0A6S7HLY2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HLY2_PARCT) HSP 1 Score: 85.5 bits (210), Expect = 2.320e-17 Identity = 42/97 (43.30%), Postives = 63/97 (64.95%), Query Frame = 0
Query: 1 LRKSLYDLKQSGRNWNNTLDDFLVGIGLQRLTTNPCLYFSRTDGGETNNVVAVYVDNLVIVGRR-EKVDEFKHDISQCFRIKDLGSLSRVLGIEVRR 96
L+KSLY LKQSGRNWN LD++L+ G R + C+Y +T GE +V ++VD+L+I +K+ +FK ++ FR+KDLG +S LGI ++
Sbjct: 316 LKKSLYGLKQSGRNWNRVLDEYLISDGFIRNPVDHCVYQKQT--GEDIIIVVIWVDDLIIASSNTDKISQFKENMKSKFRMKDLGEISYFLGISFKQ 410
BLAST of mRNA_H-paniculata_contig81401.16162.1 vs. uniprot
Match: A0A2Z7AL20_9LAMI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AL20_9LAMI) HSP 1 Score: 85.1 bits (209), Expect = 2.480e-17 Identity = 38/98 (38.78%), Postives = 66/98 (67.35%), Query Frame = 0
Query: 1 LRKSLYDLKQSGRNWNNTLDDFLVGIGLQRLTTNPCLYFSRTDGGETNNVVAVYVDNLVIVG-RREKVDEFKHDISQCFRIKDLGSLSRVLGIEVRRD 97
L+KSLY LKQ+ R W D +++ +G RL+ +PC YF R+ GG ++ +YVD++++ G +++V E K +++ F +KDLG +++LG++V RD
Sbjct: 127 LKKSLYGLKQAPRCWYKRFDSYIMSLGYNRLSADPCTYFKRS-GGNDYIILLLYVDDMLVAGPNKDRVQELKAQLAREFDMKDLGPANKILGMQVHRD 223
BLAST of mRNA_H-paniculata_contig81401.16162.1 vs. uniprot
Match: A0A7D9HG25_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HG25_PARCT) HSP 1 Score: 85.1 bits (209), Expect = 2.850e-17 Identity = 42/97 (43.30%), Postives = 63/97 (64.95%), Query Frame = 0
Query: 1 LRKSLYDLKQSGRNWNNTLDDFLVGIGLQRLTTNPCLYFSRTDGGETNNVVAVYVDNLVIVGRR-EKVDEFKHDISQCFRIKDLGSLSRVLGIEVRR 96
L+KSLY LKQSGRNWN LD++L+ G R + C+Y +T GE +V ++VD+L+I +K+ +FK ++ FR+KDLG +S LGI ++
Sbjct: 291 LKKSLYGLKQSGRNWNRVLDEYLISDGFVRNPVDHCVYQKQT--GEDIIIVVIWVDDLIIASSNTDKIRQFKENMKSKFRMKDLGEISYFLGISFKQ 385
BLAST of mRNA_H-paniculata_contig81401.16162.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 3.210e-17 Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 0
Query: 1 LRKSLYDLKQSGRNWNNTLDDFLVGIGLQRLTTNPCLYFSRTDGGETNNVVAVYVDNLVIVGR-REKVDEFKHDISQCFRIKDLGSLSRVLGIEVRRD 97
LRKSLY LKQSGRNW+ +D + G GL +PCLY GE V+ +YVD+L+I R D+FK DIS+ F +KDL L +LG+ ++R+
Sbjct: 341 LRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEIL-VIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRN 437 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig81401.16162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig81401.16162.1 ID=prot_H-paniculata_contig81401.16162.1|Name=mRNA_H-paniculata_contig81401.16162.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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