prot_H-paniculata_contig810.16120.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig810.16120.1
Unique Nameprot_H-paniculata_contig810.16120.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length419
Homology
BLAST of mRNA_H-paniculata_contig810.16120.1 vs. uniprot
Match: D8LM71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM71_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 2.630e-50
Identity = 180/448 (40.18%), Postives = 225/448 (50.22%), Query Frame = 0
Query:    1 GLERTLLESHLRLLLGKLGVGSGD-GGCGGDRNEGQDGVGDEVGRRGSGDAAPRPRRHKFRYYEIPSFLKSFDRSCCTTRKFCVISSQSPPLIVHSTRQIRCCRAEVPLHSRSDGIRG--APSRSAPRIPLETRQDRAVYEFLGAGGSQTSDLDVVGLRGGSRGAG---TRGSKERGG-----FGSS---PGTPGRPGTSGLRRSAPECLESGRCISVATIDATLGELRAAFEG-AKNLLEEVSDLTSLLEDEAQRKIDVERRQQR------------PNSADGCA---VVSSELRRYGKKLEAAVRLQEHAKETADHLTL--FPSPGSSATAGSGGSRRGGIGGGAKVQHISSSSSSTSVVGIHVAVVKKGSPGLRNSGNHRCGGC---AGDKKNRGGVEGGSNGGNCRCXNNRSXXXXXXXGST-SVCDKLRGAVRVAREEETLED 412
            GLERTLLE+HLRLLLGKLGV SG+ GG GG  +                    RPR H FR  ++    +S  R CC T         SP        + +C       ++R            + P +PLET+QDRAVYEFL   G      +  GL GG+ G G   T G  ERGG      G+S   PGT  RPG+S   RSAPECLESGRC++VATID  LGELRAAFE  A+NLLEEV+DLT LLEDEA  K D ER+ +R             N+A   A   + SSELRRYGKKLE AVR +EHA + A  L L    +PG     G    ++ G GG   V  +S SS S+  +         GS     S  HR  G    A   +  G +  G +  +     +++       G   ++  KLRGAVR +REEE ++D
Sbjct:   58 GLERTLLEAHLRLLLGKLGVPSGNQGGKGGLASMSPSSXXXXXXXXXXXXXVGRPRPHTFREDDL--CRRSSTRPCCATTAGSPGEDSSP--------RRKCLNGRKASYARXXXXXXXXCSEPTTPYVPLETQQDRAVYEFLSTSG------ECDGLSGGAAGRGGNGTHGEAERGGSEGAAVGNSRSRPGTGRRPGSSRSARSAPECLESGRCVTVATIDTALGELRAAFEEEAQNLLEEVADLTGLLEDEAAVKADDERQSRRHLGPKAGDYGGKSNAAAAAANDPIPSSELRRYGKKLEEAVRSREHAADVAQRLALPRQRAPGLEPGCGGKDGKKKGRGG-MTVAPVSRSSRSSEDL--------PGSTARLESSRHRGPGVGRKASIGRGSGSIGSGPSVEDKARGEDKAVGRRGGGGERGALATKLRGAVRASREEEVVDD 480          
BLAST of mRNA_H-paniculata_contig810.16120.1 vs. uniprot
Match: A0A6H5KD29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD29_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 6.470e-10
Identity = 79/211 (37.44%), Postives = 98/211 (46.45%), Query Frame = 0
Query:  222 KNLLEEVSDLTSLLEDEAQRKIDVERRQQR------------PNSADGCAVVSSELRRYGKKLEAAVRLQEHAKETADHLTL--FPSPGSSATAGSGGSRRGGIGGGAKVQHISSSSSSTSVVGIHVAVVKKGSPGLRNSGNHRCGGCAGDKKNRGGVEGGSNGGNCRCXN-----NRSXXXXXXXGST-SVCDKLRGAVRVAREEETLED 412
            KNLLEEV+DLT LLEDEA  K D ERR +R             N+A   ++ SSELRRYGKKLE AVR +EHA   A  L L    +PG     G    R+ G GG        SS  S  + G  V +          S  HR  G  G +K   G   GS G      +     +++       G   ++  KLRG VR +REEE  +D
Sbjct:   57 KNLLEEVADLTGLLEDEAAVKADDERRSRRHLGPKVGDSGGTSNAAANDSIPSSELRRYGKKLEEAVRSREHAAGVAQRLALPRQRAPGLETGCGGKDGRKKGRGGTTVAPVSRSSRCSQDLPGSAVRL---------QSSRHR--GPGGGRKASIGRGSGSIGSGPSVEDKAPGEDKAVGRRGGGGERGALATKLRGTVRASREEEVADD 256          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig810.16120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM71_ECTSI2.630e-5040.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD29_9PHAE6.470e-1037.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 221..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig810contigH-paniculata_contig810:20861..23408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig810.16120.1mRNA_H-paniculata_contig810.16120.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig810 20861..23408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig810.16120.1 ID=prot_H-paniculata_contig810.16120.1|Name=mRNA_H-paniculata_contig810.16120.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=419bp
GLERTLLESHLRLLLGKLGVGSGDGGCGGDRNEGQDGVGDEVGRRGSGDA
APRPRRHKFRYYEIPSFLKSFDRSCCTTRKFCVISSQSPPLIVHSTRQIR
CCRAEVPLHSRSDGIRGAPSRSAPRIPLETRQDRAVYEFLGAGGSQTSDL
DVVGLRGGSRGAGTRGSKERGGFGSSPGTPGRPGTSGLRRSAPECLESGR
CISVATIDATLGELRAAFEGAKNLLEEVSDLTSLLEDEAQRKIDVERRQQ
RPNSADGCAVVSSELRRYGKKLEAAVRLQEHAKETADHLTLFPSPGSSAT
AGSGGSRRGGIGGGAKVQHISSSSSSTSVVGIHVAVVKKGSPGLRNSGNH
RCGGCAGDKKNRGGVEGGSNGGNCRCGNNRSGGGVSGGGSTSVCDKLRGA
VRVAREEETLEDQERFLN*
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