prot_H-paniculata_contig810.16119.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig810.16119.1
Unique Name	prot_H-paniculata_contig810.16119.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	58

Homology

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BLAST of mRNA_H-paniculata_contig810.16119.1 vs. uniprot
Match: A0A6H5JSZ1_9PHAE (MCM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ1_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 8.220e-19
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 0

Query:   12 LSPACPQIFGLFTVKLAILLTLIGGVTETDPRGMLRRGTPHLLING 57
            ++  CPQ+FGLFTVKLAILLTLIGGVTETDPRGM RRGTPHLL+ G
Sbjct:  199 IASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVG 244

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BLAST of mRNA_H-paniculata_contig810.16119.1 vs. uniprot
Match: D8LM73_ECTSI (MCM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM73_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 3.500e-18
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 0

Query:   12 LSPACPQIFGLFTVKLAILLTLIGGVTETDPRGMLRRGTPHLLING 57
            ++  CPQ+FGLFTVKLAILLTLIGGVTETDPRGM RRGTPHLL+ G
Sbjct:  314 IASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVG 359

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BLAST of mRNA_H-paniculata_contig810.16119.1 vs. uniprot
Match: A0A835Z090_9STRA (MCM2/3/5 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z090_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.790e-15
Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 0

Query:    9 ETMLSPACPQIFGLFTVKLAILLTLIGGVTETDPRGMLRRGTPHLLING 57
             T+++  CPQI+GLF VKLA+LLTLIGGVTETD RGM RRGT HLL+ G
Sbjct:  476 NTLVASICPQIYGLFAVKLAVLLTLIGGVTETDSRGMRRRGTSHLLLIG 524

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BLAST of mRNA_H-paniculata_contig810.16119.1 vs. uniprot
Match: A0A6V7P814_ANACO (DNA helicase n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7P814_ANACO)

HSP 1 Score: 67.8 bits (164), Expect = 8.070e-12
Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = 0

Query:    9 ETMLSPACPQIFGLFTVKLAILLTLIGGVTETDPRGMLRRGTPHLLING 57
             T+L   CPQIFGLFTVKLA+ LTLIGGV   D  GM  RG PH+L+ G
Sbjct:  335 NTILQGICPQIFGLFTVKLAVALTLIGGVQHVDASGMKIRGEPHMLLVG 383

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BLAST of mRNA_H-paniculata_contig810.16119.1 vs. uniprot
Match: A0A6P5EM30_ANACO (DNA helicase n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5EM30_ANACO)

HSP 1 Score: 67.8 bits (164), Expect = 8.120e-12
Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = 0

Query:    9 ETMLSPACPQIFGLFTVKLAILLTLIGGVTETDPRGMLRRGTPHLLING 57
             T+L   CPQIFGLFTVKLA+ LTLIGGV   D  GM  RG PH+L+ G
Sbjct:  308 NTILQGICPQIFGLFTVKLAVALTLIGGVQHVDASGMKIRGEPHMLLVG 356

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BLAST of mRNA_H-paniculata_contig810.16119.1 vs. uniprot
Match: A0A6P5F8U3_ANACO (DNA helicase n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5F8U3_ANACO)

HSP 1 Score: 67.8 bits (164), Expect = 8.130e-12
Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = 0

Query:    9 ETMLSPACPQIFGLFTVKLAILLTLIGGVTETDPRGMLRRGTPHLLING 57
             T+L   CPQIFGLFTVKLA+ LTLIGGV   D  GM  RG PH+L+ G
Sbjct:  308 NTILQGICPQIFGLFTVKLAVALTLIGGVQHVDASGMKIRGEPHMLLVG 356

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BLAST of mRNA_H-paniculata_contig810.16119.1 vs. uniprot
Match: A0A199V696_ANACO (DNA helicase (Fragment) n=5 Tax=Ananas comosus TaxID=4615 RepID=A0A199V696_ANACO)

HSP 1 Score: 67.8 bits (164), Expect = 8.140e-12
Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = 0

Query:    9 ETMLSPACPQIFGLFTVKLAILLTLIGGVTETDPRGMLRRGTPHLLING 57
             T+L   CPQIFGLFTVKLA+ LTLIGGV   D  GM  RG PH+L+ G
Sbjct:  304 NTILQGICPQIFGLFTVKLAVALTLIGGVQHVDASGMKIRGEPHMLLVG 352

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BLAST of mRNA_H-paniculata_contig810.16119.1 vs. uniprot
Match: A0A3B6TFU3_WHEAT (DNA helicase n=4 Tax=Triticum TaxID=4564 RepID=A0A3B6TFU3_WHEAT)

HSP 1 Score: 66.2 bits (160), Expect = 2.820e-11
Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0

Query:   12 LSPACPQIFGLFTVKLAILLTLIGGVTETDPRGMLRRGTPHLLING 57
            L   CPQIFGLFTVKLA+ LTLIGGV   DP G   RG PH+L+ G
Sbjct:  333 LKGICPQIFGLFTVKLAVALTLIGGVQHVDPSGTKVRGEPHMLLVG 378

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BLAST of mRNA_H-paniculata_contig810.16119.1 vs. uniprot
Match: M8CSY3_AEGTA (DNA helicase n=2 Tax=Aegilops tauschii TaxID=37682 RepID=M8CSY3_AEGTA)

HSP 1 Score: 66.2 bits (160), Expect = 2.840e-11
Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0

Query:   12 LSPACPQIFGLFTVKLAILLTLIGGVTETDPRGMLRRGTPHLLING 57
            L   CPQIFGLFTVKLA+ LTLIGGV   DP G   RG PH+L+ G
Sbjct:  358 LKGICPQIFGLFTVKLAVALTLIGGVQHVDPSGTKVRGEPHMLLVG 403

[Close]

BLAST of mRNA_H-paniculata_contig810.16119.1 vs. uniprot
Match: A0A3B6TNA3_WHEAT (DNA helicase n=16 Tax=Triticeae TaxID=147389 RepID=A0A3B6TNA3_WHEAT)

HSP 1 Score: 66.2 bits (160), Expect = 2.840e-11
Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0

Query:   12 LSPACPQIFGLFTVKLAILLTLIGGVTETDPRGMLRRGTPHLLING 57
            L   CPQIFGLFTVKLA+ LTLIGGV   DP G   RG PH+L+ G
Sbjct:  333 LKGICPQIFGLFTVKLAVALTLIGGVQHVDPSGTKVRGEPHMLLVG 378

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig810.16119.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig810.16119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JSZ1_9PHAE	8.220e-19	82.61	MCM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LM73_ECTSI	3.500e-18	82.61	MCM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A835Z090_9STRA	1.790e-15	71.43	MCM2/3/5 family-domain-containing protein n=1 Tax=...	[more]
A0A6V7P814_ANACO	8.070e-12	63.27	DNA helicase n=1 Tax=Ananas comosus var. bracteatu...	[more]
A0A6P5EM30_ANACO	8.120e-12	63.27	DNA helicase n=1 Tax=Ananas comosus TaxID=4615 Rep...	[more]
A0A6P5F8U3_ANACO	8.130e-12	63.27	DNA helicase n=1 Tax=Ananas comosus TaxID=4615 Rep...	[more]
A0A199V696_ANACO	8.140e-12	63.27	DNA helicase (Fragment) n=5 Tax=Ananas comosus Tax...	[more]
A0A3B6TFU3_WHEAT	2.820e-11	65.22	DNA helicase n=4 Tax=Triticum TaxID=4564 RepID=A0A...	[more]
M8CSY3_AEGTA	2.840e-11	65.22	DNA helicase n=2 Tax=Aegilops tauschii TaxID=37682...	[more]
A0A3B6TNA3_WHEAT	2.840e-11	65.22	DNA helicase n=16 Tax=Triticeae TaxID=147389 RepID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001208	MCM domain	PFAM	PF00493	MCM	coord: 8..56 e-value: 3.3E-6 score: 26.4
None	No IPR available	GENE3D	3.40.50.300		coord: 4..57 e-value: 1.6E-8 score: 36.0
None	No IPR available	PANTHER	PTHR11630:SF48	DNA HELICASE MCM9	coord: 8..55
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..38
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 39..57
None	No IPR available	TMHMM	TMhelix		coord: 15..37
IPR031327	Mini-chromosome maintenance protein	PANTHER	PTHR11630	DNA REPLICATION LICENSING FACTOR	coord: 8..55

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig810	contig	H-paniculata_contig810:2761..3999 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig810.16119.1	mRNA_H-paniculata_contig810.16119.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig810 1492..6496 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig810.16119.1 ID=prot_H-paniculata_contig810.16119.1|Name=mRNA_H-paniculata_contig810.16119.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp
MRIAHWRFETMLSPACPQIFGLFTVKLAILLTLIGGVTETDPRGMLRRGT
PHLLING*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001208	MCM_dom
IPR031327	MCM