prot_H-paniculata_contig81.16117.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig81.16117.1
Unique Nameprot_H-paniculata_contig81.16117.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length173
Homology
BLAST of mRNA_H-paniculata_contig81.16117.1 vs. uniprot
Match: D7FL92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL92_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 4.660e-34
Identity = 71/177 (40.11%), Postives = 101/177 (57.06%), Query Frame = 0
Query:    2 ETETKQPAIKIFTCMLEKTRLPAGADESLDVGETRLV---FLGLEFVRVWIQGIVVDVDRERRIFVLDDGTGTISVLISPAEPQELEFDDFEATTEHE--------LPDRGAYVLLVGSLMACVGDE---------RSTCRRYRLICDVLKDVGLESPNRDIHWQLEVIDYWKSRER 158
            + + K PA+K+F   L   R P  A +   + E+ LV    +G+EF RVW+QGIV++V+   R F++DD TGT++ ++       +  D       H         LP +G +VL+VG++ A   D          RS+CRRYR++CDV+KDVG ESPNRD  W LEVID+W SR R
Sbjct:    3 DADRKIPAVKLFVSQLNSARQPVEAADVTGLEESNLVGLVLMGIEFTRVWVQGIVIEVNPAERSFIVDDNTGTVTAVVPG-----IGLDGGTNDAGHGVRDGGADGLPKKGQHVLMVGAVEAPCDDNGQGRRVQRRRSSCRRYRVLCDVVKDVGPESPNRDTLWGLEVIDFWMSRPR 174          
BLAST of mRNA_H-paniculata_contig81.16117.1 vs. uniprot
Match: A0A6G0XVZ1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVZ1_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.700e-8
Identity = 37/126 (29.37%), Postives = 61/126 (48.41%), Query Frame = 0
Query:   28 ESLDVGETRLVFLGLEFVRVWIQGIVVDVDRERRIFVLDDGTGTISVLISPAEPQELEFDDFEATTEHELPDRGAYVLLVGSLMACVGDERSTCRRYRLICDVLKDVGLESPNRDIHWQLEVIDYW 153
            +SL    ++ ++ G+E +R WIQGIVV V+  R  F +DDGTG + +          +  +   T  H     G YV+++G +M   G        +     V++ +  +   R+  W LEVI+YW
Sbjct:   20 KSLPESRSKYMYRGVELIRAWIQGIVVQVEAPR--FAIDDGTGVVWI----------DMQNLIKTNPHVQVVVGEYVMIIGPVMGTGGSSPRHSPSWIQAHQVIR-LSEKGMQRETLWFLEVIEYW 132          
BLAST of mRNA_H-paniculata_contig81.16117.1 vs. uniprot
Match: W4H4L9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4L9_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.310e-7
Identity = 42/129 (32.56%), Postives = 67/129 (51.94%), Query Frame = 0
Query:   29 SLDVGETRLVFLGLEFVRVWIQGIVVDVDRERRIFVLDDGTGTISVLISPAEPQELEFDDFEATTEHELPDR-GAYVLLVGSLMACVGDERSTCRR---YRLICDVLKDVGLESPNRDIHWQLEVIDYW 153
            SL    ++ ++ G+E +R WIQG+VV+V   R  F +DDGTG + + I     Q L        +   L  R G YV+++G ++  +G    +  R   +++I    KDV     +R+  W LEVI+YW
Sbjct:   20 SLPESRSKYMYRGVELIRAWIQGVVVEVQIPR--FAVDDGTGVVWIDI-----QSL------IKSNPSLNVRVGEYVMIIGPVLGSLGVPEPSPERIQAHQVIPLAAKDV-----HRECLWFLEVIEYW 130          
BLAST of mRNA_H-paniculata_contig81.16117.1 vs. uniprot
Match: A0A485LPX0_9STRA (Aste57867_24269 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPX0_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.870e-7
Identity = 40/131 (30.53%), Postives = 66/131 (50.38%), Query Frame = 0
Query:   26 ADESLDVGETRLVFLGLEFVRVWIQGIVVDVDRERRIFVLDDGTGTISVLISPAEPQELEFDDFEATTEHELPDR-GAYVLLVGSLMACVGDERSTCRRYRLICDVLKDVGLESPNRDIHWQLEVIDYWKS 155
            +  SL    ++ ++ G+E +R WIQGIVV V R R  F +DDGTG + +     + Q L        +   L  R G YV+++G +M          + +++I      +  +S  R+  W LEV++YW+S
Sbjct:  641 SSRSLQESRSKYLYRGVELIRAWIQGIVVQVQRPR--FAIDDGTGVVWI-----DMQSL------VKSNPSLDVRVGEYVMIIGPVMGTNNHTPEWVQAHQVI-----SLSGKSIQRESLWFLEVVEYWQS 753          
BLAST of mRNA_H-paniculata_contig81.16117.1 vs. uniprot
Match: A0A024UHH7_9STRA (FHA domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHH7_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 3.240e-6
Identity = 41/129 (31.78%), Postives = 66/129 (51.16%), Query Frame = 0
Query:   29 SLDVGETRLVFLGLEFVRVWIQGIVVDVDRERRIFVLDDGTGTISVLISPAEPQELEFDDFEATTEHELPDRGAYVLLVGSLMACVGDERSTC----RRYRLICDVLKDVGLESPNRDIHWQLEVIDYW 153
            SL     + ++ G+E +R WIQGIVVDV   R  F +DDGTG + +     + Q L     +A +   +   G YV+++G ++   G  +       + +++I    KDV     +R+  W LEVI+YW
Sbjct:  597 SLPESRNKYLYRGVELIRAWIQGIVVDVQMPR--FAVDDGTGIMWI-----DMQGL----IKANSSLSV-QVGEYVMIIGPVLGTQGTPQHVAPDRIQAHQVIPLTAKDV-----HRECMWFLEVIEYW 708          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig81.16117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FL92_ECTSI4.660e-3440.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6G0XVZ1_9STRA1.700e-829.37Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4H4L9_9STRA2.310e-732.56Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A485LPX0_9STRA3.870e-730.53Aste57867_24269 protein n=1 Tax=Aphanomyces stella... [more]
A0A024UHH7_9STRA3.240e-631.78FHA domain-containing protein n=2 Tax=Aphanomyces ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032245RecQ-mediated genome instability protein 2PFAMPF16100RMI2coord: 8..151
e-value: 2.3E-15
score: 56.6
IPR032245RecQ-mediated genome instability protein 2PANTHERPTHR33962FAMILY NOT NAMEDcoord: 3..155
NoneNo IPR availableGENE3D2.40.50.140coord: 5..155
e-value: 3.8E-9
score: 38.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig81contigH-paniculata_contig81:41688..51458 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig81.16117.1mRNA_H-paniculata_contig81.16117.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig81 41662..51645 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig81.16117.1 ID=prot_H-paniculata_contig81.16117.1|Name=mRNA_H-paniculata_contig81.16117.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
METETKQPAIKIFTCMLEKTRLPAGADESLDVGETRLVFLGLEFVRVWIQ
GIVVDVDRERRIFVLDDGTGTISVLISPAEPQELEFDDFEATTEHELPDR
GAYVLLVGSLMACVGDERSTCRRYRLICDVLKDVGLESPNRDIHWQLEVI
DYWKSRERYMRKRKHDNKESHS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032245RMI2