prot_H-paniculata_contig8098.16113.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig8098.16113.1
Unique Name	prot_H-paniculata_contig8098.16113.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	550

Homology

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BLAST of mRNA_H-paniculata_contig8098.16113.1 vs. uniprot
Match: A0A6H5KUE0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUE0_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 9.260e-120
Identity = 204/394 (51.78%), Postives = 259/394 (65.74%), Query Frame = 0

Query:  177 SPNSTDDEIWIVGRVLQRFDDRLGAKRDKIRERELGVIDRFSSLISTLDSSVEARDDDEFLAWLNSLKI------PQP----------SALADHPTSASSGSGDTSTGADERNRVKQFFSDAEKRLSGFVAFKEDMLFRDRESRRETDRDKEAPARVE---------VGVTAGKKATYLPKLPEEELYQIRLTAHRAMLSNCLSLVSERLEKQHLKAGLTVQEVAAATRSLYLAAPEDRLKALFPLFDVHGDGHLDADSLERVVDTTILPLTTATQRCYAAAARAALDKKAGGAMSKTMKYTLWDVLEVPVKRRCAFAWAKERKQVGPDEWRVSWEQFKPSRRDNFPEFESVAGNYLAEYRRRRAEWHNIRRGRKRAAVYGTALFTAVVLLDNI 545
            S     +E+WIVGRVL   D RLGAK++KIR  E+GVI+RF++++S LD S+E R+ DEFLAWL S         PQP          +A      +  S        A+ER  V+ F S A  RL+  V  KED LF DR    E + ++   A+ E          G  A  +    P + +E+LYQ RL AHRAML + LSL+S  L KQ LK GL++ EV AATRS YLAAPEDRL A++PLFD HGDGHLD +S++  VD  +L +T A++RCYAAAAR ALDKK    M  TMKY LWDV+EVP+KRRC+FAWA+ RKQVGPDEWRVSW+QF PSRR +FPE +SVA +Y+AE+ RRR+ WH  R+GRK A VYG+ALF AV+++DN+
Sbjct:   95 SSGDAAEELWIVGRVLDDMDTRLGAKQEKIRVHEIGVIERFAAVVSALDGSLEPREGDEFLAWLRSQGFDDASPTPQPGGGPXXXXXETAAGTKVENKCSNGKSEGGAAEERAEVEAFLSAASARLNALVVDKEDALFGDRG---EAEAEESLQAKGERGGXXXXXXXGGDASGEPVVSPNMSDEDLYQARLGAHRAMLCHFLSLLSSSLGKQQLKTGLSLGEVVAATRSAYLAAPEDRLAAVYPLFDTHGDGHLDTESVDLAVDAVVLSVTAASERCYAAAARPALDKKTAAVMPATMKYVLWDVMEVPMKRRCSFAWAENRKQVGPDEWRVSWDQFAPSRRQHFPEMDSVARDYVAEFSRRRSAWHTSRKGRKEAMVYGSALFVAVLIIDNL 485

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BLAST of mRNA_H-paniculata_contig8098.16113.1 vs. uniprot
Match: A0A836CPD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD1_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.060e-18
Identity = 46/101 (45.54%), Postives = 63/101 (62.38%), Query Frame = 0

Query:  446 MSKTMKYTLWDVLEVPVKRRCAFAWAKERKQVGPDEWRVSWEQFKPSRRDNFPEFESVAGNYLAEYRRRRAEWHNIRRGRKRAAVYGTALFTAVVLLDNIT 546
            M   ++Y  WD L+ P KRRCAFA+A+ RKQVGP EW V+ + F  ++R  F +   V G  +      R +WH +R+ RKRAA+YG  LF+A V+LD  T
Sbjct:    1 MPSALRYATWDRLDFPSKRRCAFAFAEGRKQVGPVEWHVTADAFLETQRTYFVDLVRVGGALMDVMEDERWQWHMLRKRRKRAAIYGALLFSATVVLDTWT 101

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig8098.16113.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig8098.16113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KUE0_9PHAE	9.260e-120	51.78	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CPD1_9STRA	1.060e-18	45.54	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 386..421 score: 9.269
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 370..445

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig8098	contig	H-paniculata_contig8098:4657..9530 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig8098.16113.1	mRNA_H-paniculata_contig8098.16113.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig8098 4599..9879 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig8098.16113.1 ID=prot_H-paniculata_contig8098.16113.1|Name=mRNA_H-paniculata_contig8098.16113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=550bp
MYYHSMAFAWRKMSGASSILIRKLPSSRGGGGGRGGAGGAMVILAVAARR
VVTQGAPGGALLRRRLSVAPPRSSLQARQKATRSFFNEPPATTSTSTTSP
SPAAGVAGAGLTQEPVGKGIPGAKDNEAGASGTSGAEAGTAAVSPTTTAG
AGEAAREAATAERTVGAGVKGDAATISPNSTDDEIWIVGRVLQRFDDRLG
AKRDKIRERELGVIDRFSSLISTLDSSVEARDDDEFLAWLNSLKIPQPSA
LADHPTSASSGSGDTSTGADERNRVKQFFSDAEKRLSGFVAFKEDMLFRD
RESRRETDRDKEAPARVEVGVTAGKKATYLPKLPEEELYQIRLTAHRAML
SNCLSLVSERLEKQHLKAGLTVQEVAAATRSLYLAAPEDRLKALFPLFDV
HGDGHLDADSLERVVDTTILPLTTATQRCYAAAARAALDKKAGGAMSKTM
KYTLWDVLEVPVKRRCAFAWAKERKQVGPDEWRVSWEQFKPSRRDNFPEF
ESVAGNYLAEYRRRRAEWHNIRRGRKRAAVYGTALFTAVVLLDNITGIV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair