prot_H-paniculata_contig80642.16071.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig80642.16071.1
Unique Nameprot_H-paniculata_contig80642.16071.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length119
Homology
BLAST of mRNA_H-paniculata_contig80642.16071.1 vs. uniprot
Match: A0A836CKR4_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR4_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 7.400e-9
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 0
Query:   41 RYACENVNKLLVGNKSDLEGKRAVTTEEAK 70
            RYACENVNKLLVGNKSDLE KRAVTTEEAK
Sbjct:  108 RYACENVNKLLVGNKSDLEAKRAVTTEEAK 137          
BLAST of mRNA_H-paniculata_contig80642.16071.1 vs. uniprot
Match: D7FNV2_ECTSI (Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNV2_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 7.400e-9
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 0
Query:   41 RYACENVNKLLVGNKSDLEGKRAVTTEEAK 70
            RYACENVNKLLVGNKSDLE KRAVTTEEAK
Sbjct:  108 RYACENVNKLLVGNKSDLEAKRAVTTEEAK 137          
BLAST of mRNA_H-paniculata_contig80642.16071.1 vs. uniprot
Match: A0A835YQS3_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS3_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.830e-8
Identity = 28/30 (93.33%), Postives = 28/30 (93.33%), Query Frame = 0
Query:   41 RYACENVNKLLVGNKSDLEGKRAVTTEEAK 70
            RYACENVNKLLVGNKSDLE KRAVTTEE K
Sbjct:  108 RYACENVNKLLVGNKSDLEAKRAVTTEEGK 137          
BLAST of mRNA_H-paniculata_contig80642.16071.1 vs. uniprot
Match: B8C362_THAPS (Ypt1-like rab-type small G protein n=3 Tax=Ochrophyta TaxID=2696291 RepID=B8C362_THAPS)

HSP 1 Score: 55.5 bits (132), Expect = 7.460e-7
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0
Query:   41 RYACENVNKLLVGNKSDLEGKRAVTTEEAK 70
            RYACENVNKLLVGNK DLEGKR V+TE+ K
Sbjct:  108 RYACENVNKLLVGNKCDLEGKRVVSTEQGK 137          
BLAST of mRNA_H-paniculata_contig80642.16071.1 vs. uniprot
Match: A0A0D8Y5V5_DICVI (Ras family protein n=2 Tax=Chromadorea TaxID=119089 RepID=A0A0D8Y5V5_DICVI)

HSP 1 Score: 54.3 bits (129), Expect = 8.580e-7
Identity = 26/32 (81.25%), Postives = 27/32 (84.38%), Query Frame = 0
Query:   41 RYACENVNKLLVGNKSDLEGKRAVTTEEAKVR 72
            RYACENVNKLLVGNK DL  KRAV T+ AKVR
Sbjct:  111 RYACENVNKLLVGNKCDLTAKRAVETQAAKVR 142          
BLAST of mRNA_H-paniculata_contig80642.16071.1 vs. uniprot
Match: A0A016U462_9BILA (Uncharacterized protein n=1 Tax=Ancylostoma ceylanicum TaxID=53326 RepID=A0A016U462_9BILA)

HSP 1 Score: 52.4 bits (124), Expect = 2.030e-6
Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 0
Query:   41 RYACENVNKLLVGNKSDLEGKRAVTTEEAKV 71
            RYACENVNKLLVGNK DL  KRAV T+ AKV
Sbjct:   51 RYACENVNKLLVGNKCDLTAKRAVETQAAKV 81          
BLAST of mRNA_H-paniculata_contig80642.16071.1 vs. uniprot
Match: A0A7S2HS85_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HS85_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 2.810e-6
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0
Query:   41 RYACENVNKLLVGNKSDLEGKRAVTTEEAK 70
            RYACENVNKLLVGNK DLE  R VTTE+AK
Sbjct:  108 RYACENVNKLLVGNKCDLESSRKVTTEQAK 137          
BLAST of mRNA_H-paniculata_contig80642.16071.1 vs. uniprot
Match: A0A223HE50_9STRA (Ras-related protein Ypt1 (Fragment) n=1 Tax=Phytophthora sp. TaxID=89336 RepID=A0A223HE50_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 4.850e-6
Identity = 27/44 (61.36%), Postives = 30/44 (68.18%), Query Frame = 0
Query:   26 KKWLFSTLTNHPTGYRYACENVNKLLVGNKSDLEGKRAVTTEEA 69
            K+WL       P   RYACENVNKLLVGNKSDL  KR V+T+ A
Sbjct:   57 KQWL-------PEIDRYACENVNKLLVGNKSDLTAKRVVSTDAA 93          
BLAST of mRNA_H-paniculata_contig80642.16071.1 vs. uniprot
Match: K3W769_GLOUD (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=K3W769_GLOUD)

HSP 1 Score: 53.1 bits (126), Expect = 5.360e-6
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0
Query:   41 RYACENVNKLLVGNKSDLEGKRAVTTEEAK 70
            RYACENVNKLLVGNKSDL  KR V+TE AK
Sbjct:  108 RYACENVNKLLVGNKSDLTAKRVVSTEAAK 137          
BLAST of mRNA_H-paniculata_contig80642.16071.1 vs. uniprot
Match: A0A4Y1NJP8_9STRA (Ras-related protein (Fragment) n=23 Tax=Phytophthora TaxID=4783 RepID=A0A4Y1NJP8_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 8.160e-6
Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 0
Query:   41 RYACENVNKLLVGNKSDLEGKRAVTTEEAK 70
            RYACENVNKLLVGNKSDL  KR V+T+ AK
Sbjct:   94 RYACENVNKLLVGNKSDLTAKRVVSTDAAK 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig80642.16071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKR4_9STRA7.400e-996.67Ras related protein PiYpt1 n=1 Tax=Tribonema minus... [more]
D7FNV2_ECTSI7.400e-996.67Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YQS3_9STRA2.830e-893.33Ras related protein PiYpt1 n=1 Tax=Tribonema minus... [more]
B8C362_THAPS7.460e-783.33Ypt1-like rab-type small G protein n=3 Tax=Ochroph... [more]
A0A0D8Y5V5_DICVI8.580e-781.25Ras family protein n=2 Tax=Chromadorea TaxID=11908... [more]
A0A016U462_9BILA2.030e-680.65Uncharacterized protein n=1 Tax=Ancylostoma ceylan... [more]
A0A7S2HS85_9STRA2.810e-683.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A223HE50_9STRA4.850e-661.36Ras-related protein Ypt1 (Fragment) n=1 Tax=Phytop... [more]
K3W769_GLOUD5.360e-683.33Uncharacterized protein n=4 Tax=Oomycota TaxID=476... [more]
A0A4Y1NJP8_9STRA8.160e-680.00Ras-related protein (Fragment) n=23 Tax=Phytophtho... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..119
NoneNo IPR availableGENE3D3.40.50.300coord: 19..89
e-value: 1.9E-5
score: 26.3
IPR001806Small GTPasePFAMPF00071Rascoord: 38..70
e-value: 5.6E-5
score: 22.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig80642contigH-paniculata_contig80642:10..366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig80642.16071.1mRNA_H-paniculata_contig80642.16071.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig80642 4..366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig80642.16071.1 ID=prot_H-paniculata_contig80642.16071.1|Name=mRNA_H-paniculata_contig80642.16071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp
MQTLSNLPKSGSSGKGFALAFRGLKKKWLFSTLTNHPTGYRYACENVNKL
LVGNKSDLEGKRAVTTEEAKVRDGDAWISTLAGSRSVRCVLSVAFGDKVR
FLAHIFGGLDFSVRRCGHI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase