prot_H-paniculata_contig8051.16063.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8051.16063.1
Unique Nameprot_H-paniculata_contig8051.16063.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length375
Homology
BLAST of mRNA_H-paniculata_contig8051.16063.1 vs. uniprot
Match: D7G3P1_ECTSI (Similar to Mucin-1 (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P1_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 1.510e-91
Identity = 149/217 (68.66%), Postives = 185/217 (85.25%), Query Frame = 0
Query:  160 DPSSISTRNPSTAMGLLMIFQMQTVSLLRLLEANITKPFMSFLDSLKWLNLHFDVDLKFASCDDADTKYEWTNNDNGTFALNTFFVFGFLAILVIFHILLLSYLEATWLSQANAIHEHRLRLMREK----VYAATDGKSAAAYAKYLDFQNADRELDEQERISTERYLRKHNSVWMYFPHVELLFLLFAYQGASSAEARMISSGCAPLVVFGLCALV 372
            DPSS+STR+P   +GLLM+FQMQ VSLLR++EANIT PFM+FLDSLKW+NLHF+VD+ F SCD+ +T++ W+N+DNGT+ALNTF VF  L +L+I HILL+SYLEA WLSQANAIH HRL ++R++      A  DG++ AAYAKYLD QN DR+L EQE++STER+L++H+SVWMYFPHVELLFLLFAYQGAS+AEARMI SGC PLVV G+CAL+
Sbjct:  506 DPSSVSTRSPGATLGLLMVFQMQFVSLLRMMEANITTPFMNFLDSLKWMNLHFEVDISFLSCDEEETRFNWSNDDNGTWALNTFLVFFLLLVLIILHILLVSYLEAAWLSQANAIHRHRLAILRQRSSDEAAAPFDGRTEAAYAKYLDAQNHDRDLYEQEQVSTERFLKRHHSVWMYFPHVELLFLLFAYQGASAAEARMIYSGCFPLVVMGICALI 722          
BLAST of mRNA_H-paniculata_contig8051.16063.1 vs. uniprot
Match: A0A6H5LAH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAH5_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 3.230e-86
Identity = 145/206 (70.39%), Postives = 175/206 (84.95%), Query Frame = 0
Query:  171 TAMGLLMIFQMQTVSLLRLLEANITKPFMSFLDSLKWLNLHFDVDLKFASCDDADTKYEWTNNDNGTFALNTFFVFGFLAILVIFHILLLSYLEATWLSQANAIHEHRLRLMREK----VYAATDGKSAAAYAKYLDFQNADRELDEQERISTERYLRKHNSVWMYFPHVELLFLLFAYQGASSAEARMISSGCAPLVVFGLCALV 372
            T +GLLM+FQMQ VSLLR+LEANIT PFM+FLDSLKW+NLHF+VDL F SCD  +T+++W+N+DNGT+ALNTF VF  L +L+I HILL+SYLEA WLSQANAIH HRL ++R++      A  DG++ AAYAKYLD QN DR+L EQER+STER+L++H SVWMYFPHVELLFLLFAYQGAS+AEARMI SGC PLVV G+CAL+
Sbjct:  840 TTLGLLMVFQMQFVSLLRMLEANITTPFMNFLDSLKWMNLHFEVDLTFLSCDGEETRFDWSNDDNGTWALNTFLVFSLLLVLIILHILLVSYLEAAWLSQANAIHRHRLAVLRQRSSDEAAAPFDGRTEAAYAKYLDAQNHDRDLYEQERVSTERFLKRHQSVWMYFPHVELLFLLFAYQGASAAEARMIYSGCFPLVVMGVCALI 1045          
BLAST of mRNA_H-paniculata_contig8051.16063.1 vs. uniprot
Match: D8LIK9_ECTSI (Beta strand repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK9_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 1.680e-35
Identity = 78/124 (62.90%), Postives = 97/124 (78.23%), Query Frame = 0
Query:  149 AQTSVTGGVGPDPSSISTRNPSTAMGLLMIFQMQTVSLLRLLEANITKPFMSFLDSLKWLNLHFDVD-LKFASCDDADTKYEWTNNDNGTFALNTFFVFGFLAILVIFHILLLSYLEATWLSQA 271
            AQ + T  V  DP ++S+R+PS  +GLLMIFQ+Q +S LRLLEANIT PF   LD LKWLNLHFDVD + FA CDD D+ + WT +DNG +A NTF VFGF+A+L++ HILLLSY+EA+WLSQA
Sbjct:  991 AQETATDAVSTDPGTVSSRSPSATLGLLMIFQIQFLSSLRLLEANITAPFRRMLDQLKWLNLHFDVDFVGFAGCDDEDS-FTWTEDDNGMWAFNTFAVFGFMALLILCHILLLSYIEASWLSQA 1113          
BLAST of mRNA_H-paniculata_contig8051.16063.1 vs. uniprot
Match: A0A835ZA46_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA46_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 7.470e-10
Identity = 65/227 (28.63%), Postives = 94/227 (41.41%), Query Frame = 0
Query:  198 FMSFLDSLKWLNLHFDVDLKFASCDDADTKYEWTNNDNGTFALNTFFVFGFLAILVIFHILLLSYLEATWLSQANAIHEH----RLRLMREKVY------------------AATDGKSAA-----AYAKYLDFQNADRELDEQERISTERYL------------------------RKHNSVWMYFPHVELLFLLFAYQGASSAEARMISSGCAPLVVFGLCALVS 373
            F SF DSL W+NL ++ D+     DD+    + T     TF  NT  V G    + + H+  +S +EA WL++  A HE      L    +                     A+ D          A+A+      A   L ++     E                           R+ +SVW++FPHVELLFLLFAY+GA +A+A M+ S CA LV   +  LV+
Sbjct: 1277 FRSFTDSLTWVNLWWNADMLVP--DDSCIASDTTGVGGPTFVGNTVLVIGITLAIFVLHLAGVSLVEAFWLAKDKARHESGSSGHLSCRNDSXXXXXXXXXXXXXXXXXXXEASDDVMDTVMIGPGAFARNASKMRAQARLKKRRPSGQEAVFDAANDAPVDHXXXXXXXXXXXXVRRRSHSVWLHFPHVELLFLLFAYEGAVAAQASMLESPCASLVAASVALLVA 1501          
BLAST of mRNA_H-paniculata_contig8051.16063.1 vs. uniprot
Match: A0A6H5JU12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU12_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 5.290e-8
Identity = 35/48 (72.92%), Postives = 38/48 (79.17%), Query Frame = 0
Query:  176 LMIFQMQTVSLLRLLEANITKPFMSFLDSLKWLNLHFDVD-LKFASCD 222
            LMIFQ+Q +S LRLLEANIT PF   LD LKWLNLHFDVD + FA CD
Sbjct: 1906 LMIFQIQFLSSLRLLEANITAPFRRMLDRLKWLNLHFDVDFVGFAGCD 1953          
BLAST of mRNA_H-paniculata_contig8051.16063.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 1.300e-7
Identity = 67/253 (26.48%), Postives = 117/253 (46.25%), Query Frame = 0
Query:  156 GVGPDPSSISTRNPSTAMGLLMIFQMQTVSLLRLLEANITKP--FMSFLDSLKWLNLHFDVDLKFASCDDADTKYEWTNNDNGT--FALNTFFVFGFLAILVIFHILLLSYLEATWLSQANA-------------IHEHRLR-----LMREKVYAATDGKSAAAYAKYLDFQNADRELDEQE------------RISTERYLRKHN-SVWMYFPHVELLFLLFAYQGASSAEARMI-SSGCAPLVVFGLCALV 372
            G G  P  +S R PS  +  +++ Q+Q +++L L++  +++      F+  L+W+NL +  D+      D    +E   ++ G   F  N   V G L  +   H+ ++S  EA WL++  A             I E   R     ++R+     TD    A+    L  ++  +  DE+E            R+S     R+H+ S W++FPHVEL+FL FA++GA ++ A  I +S C  +    + A+V
Sbjct: 1408 GEGDSPPRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDIASDG-CIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRIIRQTNPGLTDPSPFASRNPSL-VRDGSQRTDEEEGGRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMV 1658          
BLAST of mRNA_H-paniculata_contig8051.16063.1 vs. uniprot
Match: A0A835ZEA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA4_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 4.850e-6
Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 0
Query:  324 RKHNSVWMYFPHVELLFLLFAYQGASSAEARMISSGCAPLVVFGLCALV 372
            ++  S+W++FPHVELLFLLFAY+GA +A+A M+ S CA LVV  +  L+
Sbjct: 1432 QRSRSLWLHFPHVELLFLLFAYEGAVAAQASMLRSPCASLVVASVALLL 1480          
BLAST of mRNA_H-paniculata_contig8051.16063.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 1.120e-5
Identity = 68/258 (26.36%), Postives = 117/258 (45.35%), Query Frame = 0
Query:  164 ISTRNPSTAMGLLMIFQMQTVSLLRLLEANITKPFM--SFLDSLKWLNLH--FDVDLKFASCDDADTKYEWTN---------NDNGT--FALNTFFVFGFLAILVIFHILLLSYLEATWLSQANAIHE----------------HRLRLMREKVYAATDGKSAAAYA--------KYLDFQNADRELD-EQERI---STERYLR--------KHNSVWMYFPHVELLFLLFAYQGASSAEARMISSGCAPLVVFGLCA 370
            +S R PS  + +L++ Q+Q ++ L L+++   +  +      +L+W+NL     V   F+S  +   + + +          +D G   F  N       L  +V+ HI+L+S +EA WLS+  A+ E                 R   +     A +D    AA A        ++    + D  +D E++ I   S  + LR        + +SVW+YFPH+ELLFLLFA++GA +++   +  G  P V +  CA
Sbjct:   43 VSVRAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTFSSGGERLFQQDGSRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGARRASRVAHSPDAESDPDELAASASNDGAMSREHAAADSVDVGVDFEEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACA 300          
BLAST of mRNA_H-paniculata_contig8051.16063.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 1.180e-5
Identity = 65/251 (25.90%), Postives = 114/251 (45.42%), Query Frame = 0
Query:  158 GPDPSSISTRNPSTAMGLLMIFQMQTVSLLRLLEANITKP--FMSFLDSLKWLNLHFDVDLKFASCDDADTKYEWTNNDNGT--FALNTFFVFGFLAILVIFHILLLSYLEATWLSQANA-------------IHEHRLR-----LMREKVYAATDGKSAAAYAKYLDFQNADRELDEQE------------RISTERYLRKHN-SVWMYFPHVELLFLLFAYQGASSAEARMI-SSGCAPLVVFGLCALV 372
            G  PS +S R PS  +  +++ Q+Q +++L L++  +++      F+  L+W+NL +  ++      D    +E   ++ G   F  N   V G L  +   H+ ++S  EA WL++  A             I E   R     ++R      TD     +    L    + R  DE+E            ++S     R+H+ S W++FPHVEL+FL FA++GA ++ A  I +S C  +    + A+V
Sbjct: 1369 GDSPSRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIVSDG-CIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRTNPGLTDPSPFGSRNPSLVRDRSQR-TDEEEGGRGLVPMCSENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMV 1617          
BLAST of mRNA_H-paniculata_contig8051.16063.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.970e-5
Identity = 58/250 (23.20%), Postives = 109/250 (43.60%), Query Frame = 0
Query:  158 GPDPSSISTRNPSTAMGLLMIFQMQTVSLLRLLEANITKP--FMSFLDSLKWLNLHFDVDLKFASCDDADTKYEWTNNDNGT--FALNTFFVFGFLAILVIFHILLLSYLEATWLSQANA-------------IHEHRLRLMREKVYAATD-----------------GKSAAAYAKYLDFQNADR------ELDEQERISTERYLRKHN-SVWMYFPHVELLFLLFAYQGASSAEARMISSGCAPLVVF 366
            G +P   S R PS  +  +++ Q+Q ++ L L++  + +      F+  L+W+NL +  ++      D +  +E   +  G   F  N   V G L  +   H+  +S +EA WL++  A             I E + RL   ++   T+                 G  +  + +  D  + +        +  + R+S     R+H+ S W++FPHVEL+FL FA++GA ++ A  I +   P + +
Sbjct: 1181 GENPPHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASD-ECAFEAGASGIGALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQPSGTPSTLHEEESDMSDEEEGGRGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFY 1429          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8051.16063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G3P1_ECTSI1.510e-9168.66Similar to Mucin-1 (MUC-1) (Polymorphic epithelial... [more]
A0A6H5LAH5_9PHAE3.230e-8670.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIK9_ECTSI1.680e-3562.90Beta strand repeat-containing protein n=1 Tax=Ecto... [more]
A0A835ZA46_9STRA7.470e-1028.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JU12_9PHAE5.290e-872.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD90_9PHAE1.300e-726.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZEA4_9STRA4.850e-655.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G1L9_ECTSI1.120e-526.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLG6_ECTSI1.180e-525.90Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FWS4_ECTSI1.970e-523.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 349..353
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 354..373
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 374..374
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 191..237
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 261..328
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..260
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 329..348
NoneNo IPR availableTMHMMTMhelixcoord: 329..348
NoneNo IPR availableTMHMMTMhelixcoord: 353..372
NoneNo IPR availableTMHMMTMhelixcoord: 238..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8051contigH-paniculata_contig8051:4328..9945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8051.16063.1mRNA_H-paniculata_contig8051.16063.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8051 4328..9945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8051.16063.1 ID=prot_H-paniculata_contig8051.16063.1|Name=mRNA_H-paniculata_contig8051.16063.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=375bp
PSLSSIVPSSVVTVSTVSVTTAATTATSTVASVATAAGTAGSSAGGVSGG
ASAGVTAASATSAGATTTAAGATTTTAAGTTSAATGATGAGTTTATTTTG
ASTATTSTGAATTTTTAGFPDNSSALRAGANNVPNNNLSSTGGGGQNAAQ
TSVTGGVGPDPSSISTRNPSTAMGLLMIFQMQTVSLLRLLEANITKPFMS
FLDSLKWLNLHFDVDLKFASCDDADTKYEWTNNDNGTFALNTFFVFGFLA
ILVIFHILLLSYLEATWLSQANAIHEHRLRLMREKVYAATDGKSAAAYAK
YLDFQNADRELDEQERISTERYLRKHNSVWMYFPHVELLFLLFAYQGASS
AEARMISSGCAPLVVFGLCALVSG*
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