prot_H-paniculata_contig8025.16046.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8025.16046.1
Unique Nameprot_H-paniculata_contig8025.16046.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length127
Homology
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BLAST of mRNA_H-paniculata_contig8025.16046.1 vs. uniprot
Match: D7G9G7_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G7_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 3.710e-55
Identity = 94/125 (75.20%), Postives = 107/125 (85.60%), Query Frame = 0 
Query:    1 MKSEQSSSEQGMHLLVAEFLNLVTGHHVRSALFWKENVTVGVCQRFGTVALTESERAGLWSACTERPELLHLILKEVVNVTGVRFRESVNQHLRKKNAK--IQGFKFSRTDIRDIEAVVTPMDIY 123
            MKSEQSSSE+GMHLLV +FLNLVTGHH RS LFW+ENVT GVCQRFGTVALTESERAGLW+ C++RPE+L  I+KE+V VTGVRF+ESVNQ LR + AK  + GF+F   DIRDIEAVVTPM IY
Sbjct:  332 MKSEQSSSERGMHLLVTQFLNLVTGHHERSHLFWRENVTTGVCQRFGTVALTESERAGLWTVCSDRPEILLTIVKELVKVTGVRFKESVNQKLRSRKAKSVVVGFEFHLGDIRDIEAVVTPMAIY 456
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BLAST of mRNA_H-paniculata_contig8025.16046.1 vs. uniprot
Match: A0A7S2RNV0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RNV0_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.650e-9
Identity = 43/132 (32.58%), Postives = 63/132 (47.73%), Query Frame = 0 
Query:    1 MKSEQSSSEQGMHLLVAEFLNLVTGHHVRSALFWKENVTVGVCQRFGTVALTESERA---GLWSACTERPEL-------LHLILKEVVNVTGVRFRESVNQHLRKKNAKIQGFKFSRTDIRDIEAVVTPMDI 122
            M++ +SSS  GM LLVA+FLNL++G H  S +FW E +  G+  RFG   L   ER    G     T   E        L  ++  +  +TG+ F   V          + G++F   DI +++ VV  M I
Sbjct:  175 MRANRSSSWHGMSLLVAQFLNLISGSHPSSRVFWGEALLEGMVNRFGECCLFPEERLPAEGQEGVMTWESEFRRGGSSRLKDLVFRLAELTGIVFSSQVKSDFDSDPDAVNGYEFLAQDIEELKPVVKYMHI 306
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8025.16046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G9G7_ECTSI3.710e-5575.20Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2RNV0_9STRA1.650e-932.58Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8025contigH-paniculata_contig8025:2392..7436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8025.16046.1mRNA_H-paniculata_contig8025.16046.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8025 1213..8627 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8025.16046.1 ID=prot_H-paniculata_contig8025.16046.1|Name=mRNA_H-paniculata_contig8025.16046.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp
MKSEQSSSEQGMHLLVAEFLNLVTGHHVRSALFWKENVTVGVCQRFGTVA
LTESERAGLWSACTERPELLHLILKEVVNVTGVRFRESVNQHLRKKNAKI
QGFKFSRTDIRDIEAVVTPMDIYTQP*
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