prot_H-paniculata_contig8001.16030.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8001.16030.1
Unique Nameprot_H-paniculata_contig8001.16030.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length228
Homology
[Close]
BLAST of mRNA_H-paniculata_contig8001.16030.1 vs. uniprot
Match: D8LMA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA0_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 3.920e-38
Identity = 77/105 (73.33%), Postives = 94/105 (89.52%), Query Frame = 0 
Query:   21 QGRLLAMQQRKRHADHDALLLQNRINLLHKEETKACKKIEMAKQRSEEIVRMREENEKRVIERISAAEKQAVDCKLQREKNHAIEEAARQNRIKIHDDIAAARRD 125
            QGRLLAMQQRKRHADHDALLLQNRI+LL KEE KA KKIE  KQRSEEI+R+RE+NE+RV+ERISAAE+QA +CKLQ ++N A+EE AR NRI+I+ ++AAAR++
Sbjct:    4 QGRLLAMQQRKRHADHDALLLQNRISLLRKEEAKAWKKIETTKQRSEEILRLREQNERRVVERISAAERQADNCKLQNQRNQAVEETARLNRIRIYHELAAARKN 108
[Close]
BLAST of mRNA_H-paniculata_contig8001.16030.1 vs. uniprot
Match: A0A7S3XZU6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZU6_HETAK)

HSP 1 Score: 107 bits (268), Expect = 5.360e-25
Identity = 80/212 (37.74%), Postives = 123/212 (58.02%), Query Frame = 0 
Query:   13 LPSETFPYQGRLLAMQQRKRHADHDALLLQNRINLLHKEETKACKKIEMAKQRSEEIVRMREENEKRVIERISAAEKQAVDCKLQREKNHAIEEAARQNRIKIHDDIAAARRDGQFCRPQVRQQRQRIRQDILSMRRNHFRENRERRSDIKLREEEARNARLEDRARLVXXXXXXXXXXXXXXXXXXXXXXIEVAQMEQKELALIQQLKNTQ 224
            LPSE + Y G+LL+ QQRK+ A HDA LL NRI LL KEE +A +KI   K R++EI+++RE+NEKR+ ER+ AA       +   E+N   EE AR+NR +  + +   +++       VRQ++Q +R+++L MR +   +NR RR ++  +E++ R  R  +RA  +                       EV Q+E+ E+ LIQ+LK+TQ
Sbjct:   16 LPSEVYNYNGKLLSAQQRKKQAKHDAQLLANRIALLQKEEERAWRKIHQTKNRAQEILKLREDNEKRMEERMQAAMHANSIQQQLAEQNKVNEELARRNRAQQVERMFKEKKEKVQA---VRQEKQLMRRELLGMRESDVVQNRRRREEVLAQEQQLREMRERERALKLEQNKKNYEEKVKNEHQESKAKEKEVEQLERVEMELIQKLKSTQ 224
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8001.16030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMA0_ECTSI3.920e-3873.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XZU6_HETAK5.360e-2537.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..212
NoneNo IPR availablePANTHERPTHR37473FAMILY NOT NAMEDcoord: 23..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8001contigH-paniculata_contig8001:1680..8364 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8001.16030.1mRNA_H-paniculata_contig8001.16030.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8001 1680..8364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8001.16030.1 ID=prot_H-paniculata_contig8001.16030.1|Name=mRNA_H-paniculata_contig8001.16030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MATISSAAAPTPLPSETFPYQGRLLAMQQRKRHADHDALLLQNRINLLHK
EETKACKKIEMAKQRSEEIVRMREENEKRVIERISAAEKQAVDCKLQREK
NHAIEEAARQNRIKIHDDIAAARRDGQFCRPQVRQQRQRIRQDILSMRRN
HFRENRERRSDIKLREEEARNARLEDRARLVEESRRSYEDRVKREEDEIV
AKEIEVAQMEQKELALIQQLKNTQASSQ
back to top