prot_H-paniculata_contig7995.16012.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7995.16012.1
Unique Nameprot_H-paniculata_contig7995.16012.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length927
Homology
BLAST of mRNA_H-paniculata_contig7995.16012.1 vs. uniprot
Match: A0A6H5L440_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L440_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 4.400e-94
Identity = 260/712 (36.52%), Postives = 349/712 (49.02%), Query Frame = 0
Query:  242 RCVFPQELKACCKALESREHRAEDELKRGLKKWDLKAVDRALGQLQVLELRELAAKFEKQKQDVISKRWGLQETLRELQENVDREGPSRLREACVKAETFSCTDLPEYQMAKRTLEFAQATQLEAHARRVLNNHGLAPDPRCNVRLDPVGGATLRFEAVCPDELLGDSGGRMLHLENGFKEKGTMDDTGGRGHGFSSTAVSRTLELRP--QEGDEDAPILGSTRGDLDDAEGNAEGRGMGE---GRVVEYPIRGQHGQLGPRWKPRS----------------ARDSSGVVQ-EYHGEQQALMMNLRINLLREFSDYVTQQKVEHRRACDKDRRALERAEEEAAHHREHIDMMAAQKEQNGRHLRLLQERNTAKDIERKNRQQEKERREDDDRL-----------------KELWDADGNFFHSLTVVDLVLSACTIAWRKGFNPGPGAVWSGLWGLVVAECREEFSTAAYATASAAISAAGTVTAAGSGAYSPSATLDY-AVAPADWSLQQSEACAESGVGEWGAGEMMELGEEADSDYGSTVTSALWWACSNAASYVGAAVKVGYSTSGWVLGQTLSMVSSDVQCEIIAVLSAMAWLFSLWLALRVVASL--GADGPGPAATVTRLAVLASWVWGKFHVQLMEATHELLLPALPAPLLVLMCAPVLQYVERHRYPAGVWKWYGWDVRPFVFRVLPVFITAFVAVGLGSQA 911
            RCVF +EL   C  L  RE  A D LK GL+ WDL+  DRAL QL++LEL E+  +FEK+++DV  KRW LQ+ L+  +E+     PSRLR ACVKAETFSC DL EY+ AKR+LE A A +LE  ARR+L+ +G+  DPRCNVRLD  GG  L    V     L D GG  L +                G   +S +V R L L    QE  E  P     RG  DD + +     + E   GR     + G+     P W+P +                AR S+G  + +    QQ L++  R +   +F  YVT+ + EHRRAC+++  +L+  + E ++ + +I                L ER+  +D        EK+R +D                     +EL   DG F+ +L+  ++ L+A   A++KG N  PGA+    WGL+VAEC +           A            +GA  P     + A APA   L+   A                              SALWWA S A S  GA V+ GYS+ GW+LGQTL +V+ DV+CE+ AVLS +AWL SL LA ++V  L  G  G GPA  V R  +LA WVW +F   ++ A   +LL   P P LVL    V+ YVERHR P G W   GWDVRP  FRVLP  + + +A  LG +A
Sbjct:  273 RCVFREELARWCDRLAEREQEAVDWLKLGLETWDLEMADRALAQLRLLELPEIVQEFEKKREDVRGKRWRLQQELKAAEESAKEGNPSRLRNACVKAETFSCEDLDEYRPAKRSLENAHAARLEVQARRILSIYGIPADPRCNVRLDSAGGPALLLRDV---PRLADDGGAGLFI----------------GADAASPSVGRRLVLDSVKQEAGEKHP-----RGAPDDDDASDRRMDVSEETCGREGNGVVGGEF-SCSPPWQPPADAPAVGVNGSGDVATWARSSAGGGETQLSRRQQELVLAARRSAETDFMAYVTKLEEEHRRACEREASSLKARDAEESYRQAYIAR--------------LDERSVREDA---RLVMEKKRLQDXXXXXXXXXXXXXXXXXXXXXQELQARDGGFWLALSAFEVCLAAAGAAYKKGINLAPGAILDAAWGLLVAECADGXXXXXXXXXVAV-----------TGAVPPFCENPFGAAAPAATPLEGGAAGVLDXXXXXXXXXXXXXXXXXXXXRSDGSESALWWALSYAGSTAGAVVRAGYSSGGWLLGQTLGLVTPDVRCEVRAVLSLVAWLLSLALAQKIVGGLLLGPGGGGPATGVLRWLLLAVWVWARFQGWVVSAARGMLLLLAPVPALVLAYGLVMGYVERHRKPDGCWWVRGWDVRPVWFRVLPTVVASGLAWFLGGRA 931          
BLAST of mRNA_H-paniculata_contig7995.16012.1 vs. uniprot
Match: D7FUX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX0_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 9.820e-93
Identity = 294/880 (33.41%), Postives = 402/880 (45.68%), Query Frame = 0
Query:   91 GRDGETAEERGREAKRCLGVLEGLVKEGLDVSRSLEGLVKEVAEASQKCPWDAR-----GKNTGRLTELRRLLRKSVAKAERTREELEMILEVERVLYALDNSSTSGGSDNSLDLLLPPQTDNDEIGELPSERLCNRVTVMIGTQALTPAAAAVS-------------------------------ARCVFPQELKACCKALESREHRAEDELKRGLKKWDLKAVDRALGQLQVLELRELAAKFEKQKQDVISKRWGLQETLRELQENVDREGPSRLREACVKAETFSCTDLPEYQMAKRTLEFAQATQLEAHARRVLNNHGLAPDPRCNVRLDPVGGATLRFEAVCPDELLGDSGGRMLHLENGFKEKGTMDDTGGRGHGFSSTAVSRTLELRP--QEGDEDAPILGSTRGDLDDAEGNAEGRGMGEGRVVEYPIRGQHGQLGPRWKPRS----------------ARDSSGVVQ-EYHGEQQALMMNLRINLLREFSDYVTQQKVEHRRACDKDRRALERAEEEAAHHREHIDMMAAQKEQNGRHLRLLQERNTAKDIERKNRQQEKERREDDDRLKELWDADGNFFHSLTVVDLVLSACTIAWRKGFNPGPGAVWSGLWGLVVAECREEFSTAAYATASAAISAAGTVTAAGSGAYSPSATLDY-AVAPADWSLQQSEACAESGVGEWGAGEMMELGEEADSDYGSTVT-SALWWACSNAASYVGAAVKVGYSTSGWVLGQTLSMVSSDVQCEIIAVLSAMAWLFSLWLALRVVASL--GADGPGPAATVTRLAVLASWVWGKFHVQLMEATHELLLPALPAPLLVLMCAPVLQYVERHRYPAGVWKWYGWDVRPFVFRVLPVFITAFVAVGLGSQA 911
            G    +  ER  EA+R    L+ LV+EGL++ R              + PW+A      G+ + RL    R L + +AK ER  +EL ++ EVE++L  L                                            Q  TP  A +S                               +RCVF +EL   C  L  RE  A D LK GL+ WDL+  DRAL QL++LEL E+  +FEK+++DV  KRW LQ+ L+  +E      PSRLR ACVKAETFSC DL EY+ AKR+LE A A +LE  ARR+L+ +G+  DPRCNVRLD  GG  L    V     L D GG  L          T  DT       +S +V R L L    +E  E  P      GD  D   +      G G      +RG+     PR +P +                AR S+G  + +    QQ L++  R +   +F   VT+ + EHRRAC+++  +L+  + E ++ + +I  +  +  +    L + ++R                        + L   DG+F+ +L+  ++ L+A   A++KG +  PGA+    W L+VAEC +        T                GA  P     + A APA  SL+   A A    GE GAG              S  + SALWWA S A S  GA V+ GYS+ GW+LGQTL  V+  V+CE+ AV S +AWL SL LA ++V  L  G  G GPA  V R  +LA WVW +F   ++ A   +LL   PAP LVL    V+ YVERHR P G W   GWDVRP  FRVLP  + + +A  LG +A
Sbjct:  133 GSSSGSLRERAAEAERQRAALQELVEEGLELGR--------------RYPWEAARRRRGGEESRRLESCARELSQRLAKVERAAQELGVMAEVEQLLARLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRPQC-TPRRARLSXXXXXXXXXXXXXXXXXXXXXXXXXXARRTDSRCVFREELARWCDRLAEREQEAVDWLKLGLETWDLEMADRALAQLRLLELPEIVQEFEKKREDVRGKRWRLQQELKTAEELAKEGNPSRLRNACVKAETFSCEDLDEYRPAKRSLENAHAARLEVKARRILSIYGIPADPRCNVRLDSAGGPALLLRDV---PRLVDDGGAGLF---------TGADT-------ASPSVGRRLVLDSVKREAGEKHPSGAPDNGDASDRRMDVSEENCGRGG--NGVVRGEF-SCSPRRQPPADAPAVGVDGNSDVATWARSSAGGGETQLSRRQQELVVAARRSAETDFMACVTKLEEEHRRACEREASSLKARDAEESYRQAYIARLDERSVREDARLVMEKKRLQXXXXXXXXXXXXXXXXXXXXXREGLQARDGDFWLALSAFEVCLAAAAAAYKKGISLAPGAILDAAWRLLVAECADGGXXXVVVT----------------GAMPPFCQNPFGAAAPAATSLEGGTAGALDNNGECGAGXXXXXXXXXXXXXPSDGSESALWWALSYAGSTAGAVVRAGYSSGGWLLGQTLGRVTPGVRCEVRAVFSLVAWLLSLALAQKIVGGLLLGPGGGGPATGVLRWLLLAVWVWARFQGWVVSAARGMLLLLAPAPALVLAYGLVMGYVERHRKPDGCWWVRGWDVRPVWFRVLPAVVASGLAWFLGGRA 959          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7995.16012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L440_9PHAE4.400e-9436.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUX0_ECTSI9.820e-9333.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 585..612
NoneNo IPR availableCOILSCoilCoilcoord: 253..273
NoneNo IPR availableCOILSCoilCoilcoord: 541..575
NoneNo IPR availableCOILSCoilCoilcoord: 151..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 790..807
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 871..889
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..789
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 819..838
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 808..818
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 909..926
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 850..870
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 890..908
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 839..849
NoneNo IPR availableTMHMMTMhelixcoord: 890..912
NoneNo IPR availableTMHMMTMhelixcoord: 848..870

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7995contigH-paniculata_contig7995:2460..5967 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7995.16012.1mRNA_H-paniculata_contig7995.16012.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7995 1831..6025 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7995.16012.1 ID=prot_H-paniculata_contig7995.16012.1|Name=mRNA_H-paniculata_contig7995.16012.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=927bp
MFDRPMRLSSPEIQFEFEEHGASCLPVGPPTSAAIAAAMASLAWLAYRRA
RKHQRDFDPKVDKLERTTRRASELWRPDPAAAGYLGPPLRGRDGETAEER
GREAKRCLGVLEGLVKEGLDVSRSLEGLVKEVAEASQKCPWDARGKNTGR
LTELRRLLRKSVAKAERTREELEMILEVERVLYALDNSSTSGGSDNSLDL
LLPPQTDNDEIGELPSERLCNRVTVMIGTQALTPAAAAVSARCVFPQELK
ACCKALESREHRAEDELKRGLKKWDLKAVDRALGQLQVLELRELAAKFEK
QKQDVISKRWGLQETLRELQENVDREGPSRLREACVKAETFSCTDLPEYQ
MAKRTLEFAQATQLEAHARRVLNNHGLAPDPRCNVRLDPVGGATLRFEAV
CPDELLGDSGGRMLHLENGFKEKGTMDDTGGRGHGFSSTAVSRTLELRPQ
EGDEDAPILGSTRGDLDDAEGNAEGRGMGEGRVVEYPIRGQHGQLGPRWK
PRSARDSSGVVQEYHGEQQALMMNLRINLLREFSDYVTQQKVEHRRACDK
DRRALERAEEEAAHHREHIDMMAAQKEQNGRHLRLLQERNTAKDIERKNR
QQEKERREDDDRLKELWDADGNFFHSLTVVDLVLSACTIAWRKGFNPGPG
AVWSGLWGLVVAECREEFSTAAYATASAAISAAGTVTAAGSGAYSPSATL
DYAVAPADWSLQQSEACAESGVGEWGAGEMMELGEEADSDYGSTVTSALW
WACSNAASYVGAAVKVGYSTSGWVLGQTLSMVSSDVQCEIIAVLSAMAWL
FSLWLALRVVASLGADGPGPAATVTRLAVLASWVWGKFHVQLMEATHELL
LPALPAPLLVLMCAPVLQYVERHRYPAGVWKWYGWDVRPFVFRVLPVFIT
AFVAVGLGSQAGCGAAGAALEWWCVL*
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