prot_H-paniculata_contig79829.16001.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig79829.16001.1
Unique Nameprot_H-paniculata_contig79829.16001.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length180
Homology
BLAST of mRNA_H-paniculata_contig79829.16001.1 vs. uniprot
Match: A0A6B7ILH5_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7ILH5_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 5.850e-121
Identity = 170/179 (94.97%), Postives = 174/179 (97.21%), Query Frame = 0
Query:    2 KKSLLIFVLVFSLPLVTFADVAGLTKCSESAPFNKRLDASVKKLEGRVQKYEADSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSSSSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLASDSEITVSP 180
            KKSLLIFVLVFSLPLVTFADVAGLTKCSES  FNKRLDASVKKLEGR+QKYEA SPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGR+YLNT+S SSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLA DS+ITVSP
Sbjct:    5 KKSLLIFVLVFSLPLVTFADVAGLTKCSESTTFNKRLDASVKKLEGRIQKYEAGSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRNYLNTISGSSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLAPDSDITVSP 183          
BLAST of mRNA_H-paniculata_contig79829.16001.1 vs. uniprot
Match: A0A8F0FAP0_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAP0_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 8.560e-114
Identity = 161/180 (89.44%), Postives = 171/180 (95.00%), Query Frame = 0
Query:    1 LKKSLLIFVLVFSLPLVTFADVAGLTKCSESAPFNKRLDASVKKLEGRVQKYEADSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSSSSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLASDSEITVSP 180
            LKKSLLIF +  SLPL+ FADVAGLTKCSESA FNKRL++SVKKLE RVQKYEA SPPALALEQQI+RTKQRFDRYSNSELLCGK+GLPHLITDGRWDHAVEFMIPGMMFLYI+GWIGWVGR YLNTVS++SNPTEKEIIIDVPLALKIMS+GFIWP SAWQEFTSGNFLASDSEITVSP
Sbjct:    4 LKKSLLIFFVTLSLPLIAFADVAGLTKCSESAAFNKRLESSVKKLELRVQKYEAGSPPALALEQQISRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLNTVSNTSNPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGNFLASDSEITVSP 183          
BLAST of mRNA_H-paniculata_contig79829.16001.1 vs. uniprot
Match: D1J7A8_ECTSI (Photosystem I reaction center subunit III n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7A8_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 2.720e-113
Identity = 160/180 (88.89%), Postives = 170/180 (94.44%), Query Frame = 0
Query:    1 LKKSLLIFVLVFSLPLVTFADVAGLTKCSESAPFNKRLDASVKKLEGRVQKYEADSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSSSSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLASDSEITVSP 180
            +KKSLLIF L  SLPL +FADVAGLTKCSES  FNKRL+ SVKKLEGRVQKYE +SPPALALEQQINRTKQRF+RYSNSELLCGK+GLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVS+++NPTEKEIIIDVPLALKIMSSGFIWP+SAWQEFTSG FLA DSEITVSP
Sbjct:   37 IKKSLLIFFLTLSLPLASFADVAGLTKCSESVAFNKRLELSVKKLEGRVQKYEPNSPPALALEQQINRTKQRFNRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSNTTNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGKFLAPDSEITVSP 216          
BLAST of mRNA_H-paniculata_contig79829.16001.1 vs. uniprot
Match: A0A8F0JXW8_9PHAE (Photosystem I reaction center subunit III n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0JXW8_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 7.040e-113
Identity = 158/180 (87.78%), Postives = 167/180 (92.78%), Query Frame = 0
Query:    1 LKKSLLIFVLVFSLPLVTFADVAGLTKCSESAPFNKRLDASVKKLEGRVQKYEADSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSSSSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLASDSEITVSP 180
            LKKS LIF L  S+PL  FADVAGLTKCSESAPFNKRL+ASVKKLE RVQKYE  SPPALALEQQINRTKQRFDRYS SELLCGK+GLPHLITDGRWDH+VEF+IPG+MFLYI+GWIGWVGRSYLNTVS +SNPTEKEIIIDVPLALKIMSSGF+WPVSAWQEFT GNFLA DSEITVSP
Sbjct:    4 LKKSFLIFFLALSIPLTAFADVAGLTKCSESAPFNKRLEASVKKLESRVQKYEVGSPPALALEQQINRTKQRFDRYSKSELLCGKEGLPHLITDGRWDHSVEFVIPGLMFLYISGWIGWVGRSYLNTVSKTSNPTEKEIIIDVPLALKIMSSGFVWPVSAWQEFTGGNFLAPDSEITVSP 183          
BLAST of mRNA_H-paniculata_contig79829.16001.1 vs. uniprot
Match: A0A344PFC1_9PHAE (Photosystem I reaction center subunit III n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A344PFC1_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 4.920e-111
Identity = 156/179 (87.15%), Postives = 168/179 (93.85%), Query Frame = 0
Query:    2 KKSLLIFVLVFSLPLVTFADVAGLTKCSESAPFNKRLDASVKKLEGRVQKYEADSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSSSSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLASDSEITVSP 180
            KKSLLIF L  SLPL +FADVAGLTKCS+S+ F KRLD+SVKKLEGR++KYE +SPPALALEQQINRTKQRFDRYSNS+LLCGKDGLPHLITDGRW+HAVEF+IPGMMFLYI+GWIGWVGRSYLNTVS  SNPTEKEIIIDVPLALKIMSSGFIWP+SAWQEFTSG FLA DSEITVSP
Sbjct:    6 KKSLLIFFLALSLPLASFADVAGLTKCSDSSAFTKRLDSSVKKLEGRIKKYEPNSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFVIPGMMFLYISGWIGWVGRSYLNTVSVFSNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGKFLAPDSEITVSP 184          
BLAST of mRNA_H-paniculata_contig79829.16001.1 vs. uniprot
Match: A0A0S0GAQ3_COSCS (Photosystem I reaction center subunit III n=29 Tax=Laminariales TaxID=2886 RepID=A0A0S0GAQ3_COSCS)

HSP 1 Score: 319 bits (817), Expect = 2.970e-109
Identity = 154/179 (86.03%), Postives = 164/179 (91.62%), Query Frame = 0
Query:    2 KKSLLIFVLVFSLPLVTFADVAGLTKCSESAPFNKRLDASVKKLEGRVQKYEADSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSSSSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLASDSEITVSP 180
            KKS+LIF L  S+PL  FADVAGLTKCSESAPFNKR DASVKKLE RV+KYE  SPPALALEQQI RTKQRF RYSNSELLCGK+GLPHLITDGRWDHAVEF+IPGMMFLYI+GWIGW GRSYLNTV ++SNPTEKEII+DVPLALKIMSSGFIWPVSAWQEFT+GNFL  DSEITVSP
Sbjct:   23 KKSVLIFFLALSIPLAAFADVAGLTKCSESAPFNKRFDASVKKLEVRVKKYEPGSPPALALEQQITRTKQRFTRYSNSELLCGKEGLPHLITDGRWDHAVEFVIPGMMFLYISGWIGWAGRSYLNTVGATSNPTEKEIILDVPLALKIMSSGFIWPVSAWQEFTTGNFLVPDSEITVSP 201          
BLAST of mRNA_H-paniculata_contig79829.16001.1 vs. uniprot
Match: A0A2R4QPX5_9PHAE (Photosystem I reaction center subunit III n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPX5_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 5.690e-108
Identity = 149/180 (82.78%), Postives = 168/180 (93.33%), Query Frame = 0
Query:    1 LKKSLLIFVLVFSLPLVTFADVAGLTKCSESAPFNKRLDASVKKLEGRVQKYEADSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSSSSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLASDSEITVSP 180
            LKK LL+ ++ FSLP   FAD+AGLTKCS+S+ FN RLD+SVKKLE RV+KYEA SPPALALEQQI+RTKQRF+RYSNSELLCGKDGLPHLITDGRWDHAVEF+IPG+MF+YI+GWIGWVGRSY+N VS++ NPTEKEIIIDVPLALKIMSSGFIWP+SAWQEFTSG+FLASDSEITVSP
Sbjct:    6 LKKLLLVILITFSLPSTIFADIAGLTKCSDSSTFNNRLDSSVKKLESRVKKYEAGSPPALALEQQISRTKQRFNRYSNSELLCGKDGLPHLITDGRWDHAVEFVIPGLMFIYISGWIGWVGRSYINNVSNTKNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGSFLASDSEITVSP 185          
BLAST of mRNA_H-paniculata_contig79829.16001.1 vs. uniprot
Match: A0A141BSG7_9PHAE (Photosystem I reaction center subunit III n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSG7_9PHAE)

HSP 1 Score: 314 bits (805), Expect = 1.150e-107
Identity = 148/180 (82.22%), Postives = 167/180 (92.78%), Query Frame = 0
Query:    1 LKKSLLIFVLVFSLPLVTFADVAGLTKCSESAPFNKRLDASVKKLEGRVQKYEADSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSSSSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLASDSEITVSP 180
            LKKSLLI  L  SLPL  FADVAGLTKCSES+ FN RL++SV+KLE R++KYE  SPPALALEQQINRTKQRF+RYSNSELLCGKDGLPHLITDGRWDHAVEF+IPG+MF+YI+GWIGWVGRSY+N +S++SNPTEKEIIIDVPLA+KIMSSGF+WP+SAWQEF SG+FLASDSEITVSP
Sbjct:    6 LKKSLLIVFLTLSLPLTVFADVAGLTKCSESSAFNNRLESSVRKLESRIKKYETGSPPALALEQQINRTKQRFNRYSNSELLCGKDGLPHLITDGRWDHAVEFIIPGIMFIYISGWIGWVGRSYINNISTTSNPTEKEIIIDVPLAIKIMSSGFVWPISAWQEFASGSFLASDSEITVSP 185          
BLAST of mRNA_H-paniculata_contig79829.16001.1 vs. uniprot
Match: A0A8F0F743_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F743_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 1.490e-106
Identity = 147/180 (81.67%), Postives = 163/180 (90.56%), Query Frame = 0
Query:    1 LKKSLLIFVLVFSLPLVTFADVAGLTKCSESAPFNKRLDASVKKLEGRVQKYEADSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSSSSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLASDSEITVSP 180
            L+KSLL F L F+LPL  +ADVAGLTKCS+SA FNKR D SVKKLE R+QKYE  SPP LALEQQI RTK RF+RYSNSELLCGKDGLPHLITDGRWDHAVEF+IPG+MF+YI+GWIGWVGR Y+NT+ +S NPTEKEIIIDVPLA+KIMSSGFIWP+SAWQEFT+GNFLASDSEITVSP
Sbjct:    9 LRKSLLFFFLAFTLPLNAYADVAGLTKCSDSAAFNKRFDGSVKKLETRIQKYEPGSPPTLALEQQIERTKNRFNRYSNSELLCGKDGLPHLITDGRWDHAVEFIIPGIMFIYISGWIGWVGRKYINTIGTSKNPTEKEIIIDVPLAVKIMSSGFIWPISAWQEFTTGNFLASDSEITVSP 188          
BLAST of mRNA_H-paniculata_contig79829.16001.1 vs. uniprot
Match: A0A1I9LVT8_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVT8_9PHAE)

HSP 1 Score: 312 bits (799), Expect = 2.860e-106
Identity = 150/180 (83.33%), Postives = 166/180 (92.22%), Query Frame = 0
Query:    2 KKSLLIFVLVFSLPLVTFADVAGLTKCSESAPFNKRLDASVKKLEGRVQKYEADSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSSSS-NPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLASDSEITVSP 180
            KKSLLIF L  SLP ++FADVAGLTKCS+S+PFNKRL++SVKKLE R++KYE +SPPAL L++QI  TK+RFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPG+MFLYI+GWIGWVGRSYLNTVS +S NPTEKEIIIDVPLALKIMSSGFIWP+SAWQEFTSG FL  DSEITVSP
Sbjct:   38 KKSLLIFFLTLSLPFISFADVAGLTKCSDSSPFNKRLESSVKKLETRIKKYEPNSPPALVLQEQIRTTKKRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGIMFLYISGWIGWVGRSYLNTVSKTSLNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGKFLTPDSEITVSP 217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig79829.16001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B7ILH5_9PHAE5.850e-12194.97Photosystem I reaction center subunit III n=1 Tax=... [more]
A0A8F0FAP0_9PHAE8.560e-11489.44Photosystem I reaction center subunit III n=1 Tax=... [more]
D1J7A8_ECTSI2.720e-11388.89Photosystem I reaction center subunit III n=2 Tax=... [more]
A0A8F0JXW8_9PHAE7.040e-11387.78Photosystem I reaction center subunit III n=2 Tax=... [more]
A0A344PFC1_9PHAE4.920e-11187.15Photosystem I reaction center subunit III n=5 Tax=... [more]
A0A0S0GAQ3_COSCS2.970e-10986.03Photosystem I reaction center subunit III n=29 Tax... [more]
A0A2R4QPX5_9PHAE5.690e-10882.78Photosystem I reaction center subunit III n=3 Tax=... [more]
A0A141BSG7_9PHAE1.150e-10782.22Photosystem I reaction center subunit III n=15 Tax... [more]
A0A8F0F743_9PHAE1.490e-10681.67Photosystem I reaction center subunit III n=1 Tax=... [more]
A0A1I9LVT8_9PHAE2.860e-10683.33Photosystem I reaction center subunit III n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..79
NoneNo IPR availableCOILSCoilCoilcoord: 35..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..180
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.901
NoneNo IPR availableTMHMMTMhelixcoord: 5..24
NoneNo IPR availableTMHMMTMhelixcoord: 103..125
IPR003666Photosystem I PsaF, reaction centre subunit IIIPFAMPF02507PSI_PsaFcoord: 7..173
e-value: 5.2E-82
score: 273.8
IPR003666Photosystem I PsaF, reaction centre subunit IIIPANTHERPTHR34939FAMILY NOT NAMEDcoord: 4..178
IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyGENE3D1.10.8.110coord: 21..174
e-value: 3.7E-69
score: 233.3
IPR036577Photosystem I PsaF, reaction centre subunit III superfamilySUPERFAMILY81536Subunit III of photosystem I reaction centre, PsaFcoord: 21..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig79829contigH-paniculata_contig79829:2..541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig79829.16001.1mRNA_H-paniculata_contig79829.16001.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig79829 2..541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig79829.16001.1 ID=prot_H-paniculata_contig79829.16001.1|Name=mRNA_H-paniculata_contig79829.16001.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp
LKKSLLIFVLVFSLPLVTFADVAGLTKCSESAPFNKRLDASVKKLEGRVQ
KYEADSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHA
VEFMIPGMMFLYITGWIGWVGRSYLNTVSSSSNPTEKEIIIDVPLALKIM
SSGFIWPVSAWQEFTSGNFLASDSEITVSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003666PSI_PsaF
IPR036577PSI_PsaF_sf