prot_H-paniculata_contig79618.15990.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig79618.15990.1
Unique Nameprot_H-paniculata_contig79618.15990.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length44
Homology
BLAST of mRNA_H-paniculata_contig79618.15990.1 vs. uniprot
Match: A0A344PF83_9PHAE (Photosystem II reaction center X protein n=5 Tax=Ectocarpales TaxID=2877 RepID=A0A344PF83_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.320e-17
Identity = 40/43 (93.02%), Postives = 43/43 (100.00%), Query Frame = 0
Query:    1 MTPSLTNFLSSLLAGGLIVVLPISLALFFVSKKDALTRVSPKK 43
            MTPSLTNFLSSL+AGGLIVVLPISLALFFVS+KDA+TRVSPKK
Sbjct:    1 MTPSLTNFLSSLVAGGLIVVLPISLALFFVSQKDAITRVSPKK 43          
BLAST of mRNA_H-paniculata_contig79618.15990.1 vs. uniprot
Match: A0A6G6D7E9_ECTSI (Photosystem II reaction center X protein n=29 Tax=Phaeophyceae TaxID=2870 RepID=A0A6G6D7E9_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 2.670e-17
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 MTPSLTNFLSSLLAGGLIVVLPISLALFFVSKKDALTRVSPKK 43
            MTPSLTNFLSSL+AGGL+VVLPISLALFFVSKKDALTRVS KK
Sbjct:    1 MTPSLTNFLSSLIAGGLVVVLPISLALFFVSKKDALTRVSSKK 43          
BLAST of mRNA_H-paniculata_contig79618.15990.1 vs. uniprot
Match: D1J769_ECTSI (Photosystem II reaction center X protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J769_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 1.090e-16
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 MTPSLTNFLSSLLAGGLIVVLPISLALFFVSKKDALTRVSPKK 43
            MTPSLTNFLSSL+AGGL+VVLPIS ALFFVSKKDALTRVS KK
Sbjct:    1 MTPSLTNFLSSLIAGGLVVVLPISFALFFVSKKDALTRVSSKK 43          
BLAST of mRNA_H-paniculata_contig79618.15990.1 vs. uniprot
Match: A0A8F0F7I0_9PHAE (Photosystem II reaction center X protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7I0_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 6.320e-16
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 MTPSLTNFLSSLLAGGLIVVLPISLALFFVSKKDALTRVSPKK 43
            MTPSLTNFLSSLLAGGLIVVLPISLALFFVS+KDALTR+  KK
Sbjct:    1 MTPSLTNFLSSLLAGGLIVVLPISLALFFVSQKDALTRIPIKK 43          
BLAST of mRNA_H-paniculata_contig79618.15990.1 vs. uniprot
Match: A0A2R4QPT4_9PHAE (Photosystem II reaction center X protein n=2 Tax=Fucus TaxID=3011 RepID=A0A2R4QPT4_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.230e-13
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    1 MTPSLTNFLSSLLAGGLIVVLPISLALFFVSKKDALTRVSPKK 43
            MTPSLTNF  SL+AGGLIVVLPI+LAL FVS+KD+LTRV PKK
Sbjct:    1 MTPSLTNFFYSLIAGGLIVVLPITLALSFVSQKDSLTRVPPKK 43          
BLAST of mRNA_H-paniculata_contig79618.15990.1 vs. uniprot
Match: A0A1L2F1S9_9PHAE (Photosystem II reaction center X protein n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1S9_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 7.160e-13
Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    1 MTPSLTNFLSSLLAGGLIVVLPISLALFFVSKKDALTRVSPKK 43
            MTPSL NFL SL+AGG+IVVLPI++AL FVS+KDA+TRV PKK
Sbjct:    1 MTPSLANFLYSLIAGGIIVVLPITVALSFVSQKDAITRVPPKK 43          
BLAST of mRNA_H-paniculata_contig79618.15990.1 vs. uniprot
Match: A0A8E5XRE8_9PHAE (Photosystem II reaction center X protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRE8_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.990e-10
Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 MTPSLTNFLSSLLAGGLIVVLPISLALFFVSKKDALTRVSPKK 43
            MT SLTNFL SL+AG  IVV+PISLAL FVS+KD+LTR+  KK
Sbjct:    1 MTSSLTNFLFSLVAGAFIVVIPISLALLFVSQKDSLTRIPQKK 43          
BLAST of mRNA_H-paniculata_contig79618.15990.1 vs. uniprot
Match: A0A2I4Q2Y0_9PHAE (Photosystem II reaction center X protein n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2Y0_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.580e-9
Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 MTPSLTNFLSSLLAGGLIVVLPISLALFFVSKKDALTRVSPKK 43
            MT SLTNFL SL+AGG+IVV PI+LAL FVSKKDA+ RV   K
Sbjct:    1 MTSSLTNFLLSLIAGGIIVVGPITLALLFVSKKDAIIRVPQGK 43          
BLAST of mRNA_H-paniculata_contig79618.15990.1 vs. uniprot
Match: A0A7S6U9U3_9STRA (Photosystem II reaction center X protein n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9U3_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 5.110e-9
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 MTPSLTNFLSSLLAGGLIVVLPISLALFFVSKKDALTRVSPKK 43
            MT SL+NFL SL+ GGL+VV+PISLAL FVS+KD +TR  P K
Sbjct:    1 MTASLSNFLLSLITGGLVVVVPISLALIFVSQKDQVTRRPPVK 43          
BLAST of mRNA_H-paniculata_contig79618.15990.1 vs. uniprot
Match: A0A6P0NFK4_9CYAN (Photosystem II reaction center X protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0NFK4_9CYAN)

HSP 1 Score: 54.7 bits (130), Expect = 5.220e-9
Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 MTPSLTNFLSSLLAGGLIVVLPISLALFFVSKKDALTRVSPKK 43
            MT SLTNFL SL+AGG IVV+PI+LAL FVS+KDA+ RV   K
Sbjct:    1 MTSSLTNFLLSLVAGGAIVVIPITLALLFVSQKDAIIRVPQGK 43          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig79618.15990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A344PF83_9PHAE1.320e-1793.02Photosystem II reaction center X protein n=5 Tax=E... [more]
A0A6G6D7E9_ECTSI2.670e-1793.02Photosystem II reaction center X protein n=29 Tax=... [more]
D1J769_ECTSI1.090e-1690.70Photosystem II reaction center X protein n=1 Tax=E... [more]
A0A8F0F7I0_9PHAE6.320e-1690.70Photosystem II reaction center X protein n=1 Tax=P... [more]
A0A2R4QPT4_9PHAE1.230e-1381.40Photosystem II reaction center X protein n=2 Tax=F... [more]
A0A1L2F1S9_9PHAE7.160e-1376.74Photosystem II reaction center X protein n=14 Tax=... [more]
A0A8E5XRE8_9PHAE1.990e-1072.09Photosystem II reaction center X protein n=1 Tax=I... [more]
A0A2I4Q2Y0_9PHAE2.580e-972.09Photosystem II reaction center X protein n=1 Tax=D... [more]
A0A7S6U9U3_9STRA5.110e-967.44Photosystem II reaction center X protein n=1 Tax=S... [more]
A0A6P0NFK4_9CYAN5.220e-969.77Photosystem II reaction center X protein n=1 Tax=M... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009518Photosystem II PsbXPFAMPF06596PsbXcoord: 1..38
e-value: 6.1E-19
score: 67.7
NoneNo IPR availableGENE3D1.20.5.510coord: 1..39
e-value: 1.8E-7
score: 32.9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR023431Photosystem II PsbX, type 1 subfamilyHAMAPMF_01386PSII_PsbX_1coord: 1..40
score: 13.672

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig79618contigH-paniculata_contig79618:296..427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig79618.15990.1mRNA_H-paniculata_contig79618.15990.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig79618 296..427 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig79618.15990.1 ID=prot_H-paniculata_contig79618.15990.1|Name=mRNA_H-paniculata_contig79618.15990.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=44bp
MTPSLTNFLSSLLAGGLIVVLPISLALFFVSKKDALTRVSPKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009518PSII_PsbX
IPR023431PSII_PsbX_type_1_subfam