prot_H-paniculata_contig79409.15969.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig79409.15969.1
Unique Nameprot_H-paniculata_contig79409.15969.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length75
Homology
BLAST of mRNA_H-paniculata_contig79409.15969.1 vs. uniprot
Match: A0A0A9YMV4_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YMV4_LYGHE)

HSP 1 Score: 56.2 bits (134), Expect = 1.980e-7
Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    2 ELVHIDLVGPSQEPSIGGSRYGIMFTDSYSRLQRPYGIHSKSDVAAAVQRFIA 54
            +L+H+DL GP +  S GGS+Y ++F D YS  +  Y +  KSDV A V++F+A
Sbjct:  410 QLIHVDLCGPMEVASFGGSKYFLLFKDDYSHYRFCYMLSEKSDVPAVVKKFLA 462          
BLAST of mRNA_H-paniculata_contig79409.15969.1 vs. uniprot
Match: A0A6A4JR07_APOLU (Uncharacterized protein n=1 Tax=Apolygus lucorum TaxID=248454 RepID=A0A6A4JR07_APOLU)

HSP 1 Score: 54.7 bits (130), Expect = 6.930e-7
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 0
Query:    1 MELVHIDLVGPSQEPSIGGSRYGIMFTDSYSRLQRPYGIHSKSDVAAAVQRFI 53
            +ELVH+D+ GP +E SIGGSR+ I   D +SR    Y + SK +V   ++ F+
Sbjct:  469 LELVHVDVCGPMEETSIGGSRFFITIVDDFSRYTHVYFLESKEEVCTMMEEFV 521          
BLAST of mRNA_H-paniculata_contig79409.15969.1 vs. uniprot
Match: A0A5N6P2N6_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P2N6_9ASTR)

HSP 1 Score: 54.3 bits (129), Expect = 9.440e-7
Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 0
Query:    1 MELVHIDLVGPSQEPSIGGSRYGIMFTDSYSRLQRPYGIHSKSDVAAAVQRFIADM----GVP-DAFRTDGAKEFTS 72
            +EL+H DL GP Q PS+G S Y ++F D  +R+   Y IHSK +  A  + F A +    G P    R+D   EF+S
Sbjct:  468 LELIHTDLCGPMQVPSLGNSLYYLLFVDDLTRMSWVYFIHSKKEAFAKFKVFKAQVENECGHPIKVLRSDRGGEFSS 544          
BLAST of mRNA_H-paniculata_contig79409.15969.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID)

HSP 1 Score: 53.9 bits (128), Expect = 1.300e-6
Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = 0
Query:    1 MELVHIDLVGPSQEPSIGGSRYGIMFTDSYSRLQRPYGIHSKSDVAAAVQRFI 53
            +EL+H D+ GP   PS+GGSRY + F D YSR    Y +  KS+V A    F+
Sbjct:  466 LELIHSDVCGPMDVPSVGGSRYFVTFIDDYSRYTTVYMMKHKSEVLAKFTEFV 518          
BLAST of mRNA_H-paniculata_contig79409.15969.1 vs. uniprot
Match: A0A1W7R657_AEDAL (Putative retrovirus-related pol polyprotein from transposon tnt (Fragment) n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R657_AEDAL)

HSP 1 Score: 53.5 bits (127), Expect = 1.740e-6
Identity = 29/80 (36.25%), Postives = 41/80 (51.25%), Query Frame = 0
Query:    1 MELVHIDLVGPSQEPSIGGSRYGIMFTDSYSRLQRPYGIHSKSDVAAAVQRFIADMGVPDA-----FRTDGAKEFTSGAY 75
            ++LVH DL GP ++PSIGGS+Y + F D  SR+   Y + SK +   A   F A +          FRTD   E+    +
Sbjct:  401 LDLVHSDLCGPMEKPSIGGSKYFVTFIDDASRMTHVYFLKSKGEAFDAFVEFKAYVEKQTGRSIKRFRTDNGTEYVGNKF 480          
BLAST of mRNA_H-paniculata_contig79409.15969.1 vs. uniprot
Match: K3XCK7_GLOUD (Integrase catalytic domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XCK7_GLOUD)

HSP 1 Score: 53.5 bits (127), Expect = 1.750e-6
Identity = 28/76 (36.84%), Postives = 43/76 (56.58%), Query Frame = 0
Query:    2 ELVHIDLVGPSQEPSIGGSRYGIMFTDSYSRLQRPYGIHSKSDVAAAVQRFIADMGVPDA-----FRTDGAKEFTS 72
            EL+H D+ GP + PSIGGS+Y ++  D  S L + + + +KS+    ++ FI  +    A      R DGAKEF +
Sbjct:  266 ELIHFDICGPMEIPSIGGSKYLLLIVDEASGLMKGFCLRNKSESEELIKNFIVKVENQFAKKVKFVRHDGAKEFAT 341          
BLAST of mRNA_H-paniculata_contig79409.15969.1 vs. uniprot
Match: A0A6H5H5K9_9HEMI (Integrase catalytic domain-containing protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5H5K9_9HEMI)

HSP 1 Score: 53.5 bits (127), Expect = 1.760e-6
Identity = 21/52 (40.38%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    4 VHIDLVGPSQEPSIGGSRYGIMFTDSYSRLQRPYGIHSKSDVAAAVQRFIAD 55
            +++DL GP +  S+GGSRY I+F D Y+R +R + + +K+DV A +++F+ +
Sbjct:  494 INVDLCGPMEVDSVGGSRYYILFKDDYTRFRRVFFLKNKTDVPAVLKQFLEE 545          
BLAST of mRNA_H-paniculata_contig79409.15969.1 vs. uniprot
Match: UPI001E2730A9 (uncharacterized protein LOC123661222 n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E2730A9)

HSP 1 Score: 53.1 bits (126), Expect = 2.340e-6
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    1 MELVHIDLVGPSQEPSIGGSRYGIMFTDSYSRLQRPYGIHSKSDVAAAVQRFIA 54
            +EL+H D+ GP QEPS GG+RY + FTD YSR    Y +  KS+V +    F A
Sbjct:  296 LELIHSDVCGPMQEPSWGGARYLVTFTDDYSRKTFGYLMKQKSEVMSNFTTFKA 349          
BLAST of mRNA_H-paniculata_contig79409.15969.1 vs. uniprot
Match: A0A4C1XNS1_EUMVA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1XNS1_EUMVA)

HSP 1 Score: 53.1 bits (126), Expect = 2.350e-6
Identity = 25/74 (33.78%), Postives = 41/74 (55.41%), Query Frame = 0
Query:    2 ELVHIDLVGPSQEPSIGGSRYGIMFTDSYSRLQRPYGIHSKSDVAAAVQRFIADMGVPDA-----FRTDGAKEF 70
            E++H D  GP ++PSIGGSRY ++F D YS+ +R + + +K    + ++  I+            FR+D   EF
Sbjct:  307 EIIHADTCGPMEKPSIGGSRYFVVFKDEYSKYRRVFFVKTKXXXXSCIKNXISQAENETGNKIKIFRSDNGTEF 380          
BLAST of mRNA_H-paniculata_contig79409.15969.1 vs. uniprot
Match: A0A4C1TG45_EUMVA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1TG45_EUMVA)

HSP 1 Score: 53.1 bits (126), Expect = 2.350e-6
Identity = 25/74 (33.78%), Postives = 41/74 (55.41%), Query Frame = 0
Query:    2 ELVHIDLVGPSQEPSIGGSRYGIMFTDSYSRLQRPYGIHSKSDVAAAVQRFIADMGVPDA-----FRTDGAKEF 70
            E++H D  GP ++PSIGGSRY ++F D YS+ +R + + +K    + ++  I+            FR+D   EF
Sbjct:  269 EIIHADTCGPMEKPSIGGSRYFVVFKDEYSKYRRVFFVKTKXXXXSCIKNXISQAENETGNKIKIFRSDNGTEF 342          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig79409.15969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A9YMV4_LYGHE1.980e-745.28Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A4JR07_APOLU6.930e-743.40Uncharacterized protein n=1 Tax=Apolygus lucorum T... [more]
A0A5N6P2N6_9ASTR9.440e-740.26Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A7M6DPI8_9CNID1.300e-645.28Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A0A1W7R657_AEDAL1.740e-636.25Putative retrovirus-related pol polyprotein from t... [more]
K3XCK7_GLOUD1.750e-636.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5H5K9_9HEMI1.760e-640.38Integrase catalytic domain-containing protein n=1 ... [more]
UPI001E2730A92.340e-648.15uncharacterized protein LOC123661222 n=1 Tax=Melit... [more]
A0A4C1XNS1_EUMVA2.350e-633.78Retrovirus-related Pol polyprotein from transposon... [more]
A0A4C1TG45_EUMVA2.350e-633.78Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..75
e-value: 5.3E-10
score: 40.8
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig79409contigH-paniculata_contig79409:35..259 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig79409.15969.1mRNA_H-paniculata_contig79409.15969.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig79409 35..262 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig79409.15969.1 ID=prot_H-paniculata_contig79409.15969.1|Name=mRNA_H-paniculata_contig79409.15969.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
MELVHIDLVGPSQEPSIGGSRYGIMFTDSYSRLQRPYGIHSKSDVAAAVQ
RFIADMGVPDAFRTDGAKEFTSGAY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf