prot_H-paniculata_contig794.15968.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig794.15968.1
Unique Nameprot_H-paniculata_contig794.15968.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1255
Homology
BLAST of mRNA_H-paniculata_contig794.15968.1 vs. uniprot
Match: A0A6H5L7S3_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7S3_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 2.710e-90
Identity = 309/655 (47.18%), Postives = 407/655 (62.14%), Query Frame = 0
Query:    3 SLRNSWGSAASTMMM--ATSSGRLLGD---RMRPLERSRGESLQRSLEEAMQEKTALAAERAWLLEELQRAKEATLEREGAIAGQEVQTDVLKMELNAVETELRRARQELGACEAGRRELNEAAKQDIARRDREAADLSSQLHRERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAEIAEARKRAEKAESSTXXAEEKVMATHAAAKEAALDATAAMRRXXXXXXXDVREREEETSSLMLSLEAAEGRARKIVQDKEAQLRELEQVAVRSLELAERRRSESEDKAAAASTRLRXXXAELAKEERRLKELESQLRQAYAASKRELEEMGDLEARKLTEKLEYAEKALTDEQVRAKGESEKLSERLKGAERKLSSALERLRNTERRARMAETGADAARKRAEAMARKQEELSDKLAAEETGRACQRVTVTALKTQLEQLRRTSSAGDASLREAVRLREVLQEAMAIQVAATLPPHSPMTTTAAAGSVVASNSASKGKSLTGRSGSGVGVDVGVGEPEVLGRELDAKPGASLVCFSSCDGRNDVVDDSHGGCNXXXXXXXXXXXXXGGDWASVALVDLAEALRKRLKSARGELERLREVLAMXXXXXXXXXERGEDAAELRSLLEEKRGLSTELARRVDAARARTEHAEEEAERI 652
            SL +SWGS A+T  M  AT+ GR  G    R RPL+ SRGESLQRSL EA+++K ALAAER WLLEELQRA+EATLER+GA+AGQEVQTDVLKME+ A++ ELRRARQELGACEAGRREL+EAAK+D+ARRDR+AA            XXXXXXXXXXX    XXXXXXXXXXXXX         +RAE AE+  XX  E +         AA++A+ A+RR   XXXX     EEE S+L+L + A+E R+R++ +DK  +LRE+E+ AV+SLE AERRR+E E+KA+A + RLR   AE A+++R +K+LE +L +A A +  E++E    E R++  +LE   KAL+D + RA+ E+ +L  RL+  E+K       LR  E+RA+  ETG  AAR+RAEA ARK++E+S++LA  ET RACQ V VT LK QLE+LRR ++AGDA+LRE  +LR++L+ A A++   T P             VVA++    G+    RSG G                            +S +GR        GG               GG+    +LV+LAE L+ R      EL+ +R+ LAM          R +DAAELRSLLE+KRG+S  LA   +AAR R E AE +A+++
Sbjct:  533 SLGSSWGSFATTGRMGTATAGGRAAGGGLYRGRPLDGSRGESLQRSLAEALEDKRALAAEREWLLEELQRAREATLERDGALAGQEVQTDVLKMEVAALDGELRRARQELGACEAGRRELHEAAKRDLARRDRDAAXXXXXXXXXXXXXXXXXXXXXXXAATAXXXXXXXXXXXXXXXXXXXXXXRRAESAEARAXXXXEXLEXXXXXXXXAAVEASGALRREREXXXXXXXXXEEEISALLLRVGASESRSRRLSEDKAERLREVEEAAVKSLEAAERRRAEWENKASAIAARLREREAEGARKDRVVKDLEGRLGRAQAQAS-EVQEREGSELRRVAGELEVMRKALSDREARAREETGRLERRLREDEKKACKTTAGLRKLEQRAKFLETGIVAARQRAEAAARKEKEVSERLAEAETERACQEVAVTTLKAQLEELRRGAAAGDAALRETAKLRKILEGA-ALRHVGTQP-------------VVAADCGKSGRRDDTRSGGG---------------------------STSKNGR--------GGA--------------GGE----SLVELAEKLQGRTDELGRELDSVRQALAMARERFPALLAREKDAAELRSLLEQKRGVSARLASGAEAARVRAERAESQAKKM 1119          
BLAST of mRNA_H-paniculata_contig794.15968.1 vs. uniprot
Match: D7G3L4_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L4_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 2.480e-86
Identity = 295/655 (45.04%), Postives = 385/655 (58.78%), Query Frame = 0
Query:    3 SLRNSWGSAASTMMM--ATSSGRLLGD---RMRPLERSRGESLQRSLEEAMQEKTALAAERAWLLEELQRAKEATLEREGAIAGQEVQTDVLKMELNAVETELRRARQELGACEAGRRELNEAAKQDIARRDREAADLSSQLHRERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAEIAEARKRAEKAESSTXXAEEKVMATHAAAKEAALDATAAMRRXXXXXXXDVREREEETSSLMLSLEAAEGRARKIVQDKEAQLRELEQVAVRSLELAERRRSESEDKAAAASTRLRXXXAELAKEERRLKELESQLRQAYAASKRELEEMGDLEARKLTEKLEYAEKALTDEQVRAKGESEKLSERLKGAERKLSSALERLRNTERRARMAETGADAARKRAEAMARKQEELSDKLAAEETGRACQRVTVTALKTQLEQLRRTSSAGDASLREAVRLREVLQEAMAIQVAATLPPHSPMTTTAAAGSVVASNSASKGKSLTGRSGSGVGVDVGVGEPEVLGRELDAKPGASLVCFSSCDGRNDVVDDSHGGCNXXXXXXXXXXXXXGGDWASVALVDLAEALRKRLKSARGELERLREVLAMXXXXXXXXXERGEDAAELRSLLEEKRGLSTELARRVDAARARTEHAEEEAERI 652
            SL +SWGS A+T  M  AT+ GR  G    R RPL+ SRGESLQRSL EAM++K ALAAER WLLEELQRA+EATLER+GA+AGQEVQTDVLKME+ A++ ELRRARQELGACEAGRREL+EAAK+D+ARRDR+AADLS  L         X          XXXXXX   XXXXX         +RAE  E   XX                      +RR XXXXXX      EE S+L+L + A+E R+R++ +DK  +LRE+E+ AV+SLE AERRR+E E+KA+A + RLR   AE  +++R +K+LE +L +A+A +  E++E    E R++  +LE   KAL+D + RA+ E+ +L  RL+  E+K       LR  E+ A+  ETG  AAR+RAEA ARK++E+S++LA  ET RACQ + VT LK QLE+LRR ++AGDA+LREA +LR +L+                                  G +L                     R +  +P  +  C  S  GR D  D + GG +    XXXXXX           LV+LA+ L+ R      EL+ +R+ LAM          R +DAAELRSLLE+KRG+S  LA   +AARAR E AE +AE++
Sbjct:  539 SLGSSWGSCATTGRMGAATAGGRAAGGGLYRGRPLDGSRGESLQRSLAEAMEDKRALAAERDWLLEELQRAREATLERDGALAGQEVQTDVLKMEVAALDGELRRARQELGACEAGRRELHEAAKRDLARRDRDAADLSDALRXXXXXRDRXADAAAAAAATXXXXXXADKXXXXXXXXXXXXXXRRAESTEXXXXXXXXXXXXXXXXXXXXXXXXXXXLRREXXXXXXXXXXXXEEISALLLRVGASESRSRRLSEDKAERLREVEEAAVKSLEAAERRRAEWENKASAIAARLREREAEGTRKDRVVKDLEGRLGRAHAQTS-EVQEREGSELRRVAGELEVMRKALSDREARAREETGRLERRLREEEKKACKNTAGLRKLEQHAKFLETGVVAARQRAEAAARKEKEVSERLAEAETERACQEIAVTTLKAQLEELRRGAAAGDAALREAAKLRNILE----------------------------------GAAL---------------------RHMGTQPVVAADCGKS--GRRD--DTTSGGGSSGKNXXXXXXGE--------GLVELAKKLQGRTDELDQELDSVRKALAMGREENQALLAREKDAAELRSLLEQKRGVSARLASGAEAARARAERAESQAEKM 1125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig794.15968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7S3_9PHAE2.710e-9047.18PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G3L4_ECTSI2.480e-8645.04PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 691..725
NoneNo IPR availableCOILSCoilCoilcoord: 242..326
NoneNo IPR availableCOILSCoilCoilcoord: 332..416
NoneNo IPR availableCOILSCoilCoilcoord: 628..676
NoneNo IPR availableCOILSCoilCoilcoord: 37..64
NoneNo IPR availableCOILSCoilCoilcoord: 573..624
NoneNo IPR availableCOILSCoilCoilcoord: 169..198
NoneNo IPR availableCOILSCoilCoilcoord: 86..138
NoneNo IPR availablePANTHERPTHR23160MYOSIN HEAVY CHAIN-RELATEDcoord: 343..767

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig794contigH-paniculata_contig794:11060..28233 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig794.15968.1mRNA_H-paniculata_contig794.15968.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig794 11060..28235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig794.15968.1 ID=prot_H-paniculata_contig794.15968.1|Name=mRNA_H-paniculata_contig794.15968.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1255bp
GGSLRNSWGSAASTMMMATSSGRLLGDRMRPLERSRGESLQRSLEEAMQE
KTALAAERAWLLEELQRAKEATLEREGAIAGQEVQTDVLKMELNAVETEL
RRARQELGACEAGRRELNEAAKQDIARRDREAADLSSQLHRERAAREREA
SAASAAVARAVATEAVAARAAATARAEIAEARKRAEKAESSTAEAEEKVM
ATHAAAKEAALDATAAMRRERERREMDVREREEETSSLMLSLEAAEGRAR
KIVQDKEAQLRELEQVAVRSLELAERRRSESEDKAAAASTRLREREAELA
KEERRLKELESQLRQAYAASKRELEEMGDLEARKLTEKLEYAEKALTDEQ
VRAKGESEKLSERLKGAERKLSSALERLRNTERRARMAETGADAARKRAE
AMARKQEELSDKLAAEETGRACQRVTVTALKTQLEQLRRTSSAGDASLRE
AVRLREVLQEAMAIQVAATLPPHSPMTTTAAAGSVVASNSASKGKSLTGR
SGSGVGVDVGVGEPEVLGRELDAKPGASLVCFSSCDGRNDVVDDSHGGCN
GGVVGGDCGGELGGGDWASVALVDLAEALRKRLKSARGELERLREVLAMT
REEKEALRERGEDAAELRSLLEEKRGLSTELARRVDAARARTEHAEEEAE
RIRGEAASLRVELEVTEKLLEEQTERVVELAPRAMELEQGLSNKTAEAEA
AAVRAQRAEEEMATVLRDLHHARNRQTPLEEAMSAAEAERMGAMKRLIRK
DGELLTVQTRLEAALAELEAVKLSIFQGSADQRVFRQYKACVLLASTSTR
RRVESVEVTIAMLRWRQQCHRPPTLPPSTIPGERWPTPRGWSVGSSDHTR
GEEAGMAGWRPAAAEKGRKEEEKVAGSTTVVLADAQRLAKVDADILEVES
SLSLAKTRCTRSELAIRMCGTRVLAAVLQKWAARQLARTFWRLRAPDCTV
SMNASAAVASAADAMPFVDVASLRITAPASFEEPGQTRSPAGKSDGGSGD
WDVRSSPAAVLPPSSRGGVGGGGNHDRGIKSTATDATMGMPALELVDRMS
RDPAQPYASTFRDEGPGHRKDSVNFRVSPPQSPSSTWGNAVVGFHGTSAA
YHTSHATNTADAGCPNNLSFEDSGTLIGGNNMNDLSFASATSSEPRYHCL
WKGDRGESASLPTLESPLGSPLGAPSPVWVCALSVSGGEEDERGTETGEQ
CAELADAYRRSPEGGGGRGRGGERSNKREPVTASGTSTDSGGGSNSGRNG
GRGGA
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