prot_H-paniculata_contig793.15960.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig793.15960.1
Unique Nameprot_H-paniculata_contig793.15960.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
BLAST of mRNA_H-paniculata_contig793.15960.1 vs. uniprot
Match: D8LDN0_ECTSI (Zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN0_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 2.660e-24
Identity = 43/50 (86.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    3 STFQVCFERKVDCTLVPCGHHCCCLICAAQFELCPVCRAPVEQKIRAITV 52
            +T  VCFERKVDCTLVPCGHHCCCL CAAQFE CPVCRA VEQKIRAI+V
Sbjct:  113 NTCIVCFERKVDCTLVPCGHHCCCLTCAAQFEQCPVCRADVEQKIRAISV 162          
BLAST of mRNA_H-paniculata_contig793.15960.1 vs. uniprot
Match: A0A6H5KTC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC5_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 6.230e-22
Identity = 42/46 (91.30%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    7 VCFERKVDCTLVPCGHHCCCLICAAQFELCPVCRAPVEQKIRAITV 52
            VCFERKVDCTLVPCGHHCCCL CAAQFE CPVCRA VEQKIRAI+V
Sbjct:  633 VCFERKVDCTLVPCGHHCCCLTCAAQFEQCPVCRADVEQKIRAISV 678          
BLAST of mRNA_H-paniculata_contig793.15960.1 vs. uniprot
Match: D7FYF6_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF6_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 4.280e-18
Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 CYST-FQVCFERKVDCTLVPCGHHCCCLICAAQFELCPVCRAPVEQKIRAI 50
            CY   F VCF+ +VDCTLVPCGHHCCC+ CA++F LCPVCR  V  KI+ I
Sbjct:   33 CYIVGFLVCFDNEVDCTLVPCGHHCCCITCASKFSLCPVCRTTVTHKIKTI 83          
BLAST of mRNA_H-paniculata_contig793.15960.1 vs. uniprot
Match: A0A6H5KTY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY3_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 5.630e-16
Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    7 VCFERKVDCTLVPCGHHCCCLICAAQFELCPVCRAPVEQKIRAITV 52
            VCF+ +VDCTLVPCGHHCCC+ CA++F LCPVCR  V  KI+ I V
Sbjct:  746 VCFDNEVDCTLVPCGHHCCCITCASKFSLCPVCRTTVTHKIKTIPV 791          
BLAST of mRNA_H-paniculata_contig793.15960.1 vs. uniprot
Match: A0A6H5KUU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU5_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 7.380e-13
Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    7 VCFERKVDCTLVPCGHHCCCLICA-AQFELCPVCRAPVEQKIRAIT 51
            VCF+R V+CT +PCGHHCCC+ CA + F LCPVCR  +++KI+ I+
Sbjct:  927 VCFDRPVNCTFMPCGHHCCCMPCAESMFNLCPVCRVAIDKKIKTIS 972          
BLAST of mRNA_H-paniculata_contig793.15960.1 vs. uniprot
Match: D7FYF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF4_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.230e-11
Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    7 VCFERKVDCTLVPCGHHCCCLICA-AQFELCPVCRAPVEQKIRAIT 51
            VCF+R V+CT VPCGHHCCC+ CA ++  LCPVC   +++KI+ I+
Sbjct:  852 VCFDRPVNCTFVPCGHHCCCMPCAESKLNLCPVCGVAIDKKIKTIS 897          
BLAST of mRNA_H-paniculata_contig793.15960.1 vs. uniprot
Match: UPI001ED878BD (E3 ubiquitin-protein ligase LRSAM1-like isoform X3 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED878BD)

HSP 1 Score: 62.0 bits (149), Expect = 7.100e-10
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    7 VCFERKVDCTLVPCGHHCCCLICAAQFELCPVCRAPVEQKIRAI 50
            VC + K +   +PCGH CCC  C+ Q +LCP+CRA VEQKIR I
Sbjct:  501 VCLDMKCEVIFIPCGHMCCCSGCSEQLDLCPLCRALVEQKIRVI 544          
BLAST of mRNA_H-paniculata_contig793.15960.1 vs. uniprot
Match: UPI001ED8B184 (E3 ubiquitin-protein ligase LRSAM1-like isoform X1 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8B184)

HSP 1 Score: 62.0 bits (149), Expect = 7.120e-10
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    7 VCFERKVDCTLVPCGHHCCCLICAAQFELCPVCRAPVEQKIRAI 50
            VC + K +   +PCGH CCC  C+ Q +LCP+CRA VEQKIR I
Sbjct:  694 VCLDMKCEVIFIPCGHMCCCSGCSEQLDLCPLCRALVEQKIRVI 737          
BLAST of mRNA_H-paniculata_contig793.15960.1 vs. uniprot
Match: A0A7S3G327_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G327_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 1.300e-8
Identity = 21/43 (48.84%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    6 QVCFERKVDCTLVPCGHHCCCLICAAQFELCPVCRAPVEQKIR 48
            +VC   ++   LVPCGHHC C  C+ Q E CP+CRAP+ Q+++
Sbjct:  234 RVCLSGEITIVLVPCGHHCLCHECSLQLEECPLCRAPIAQRVK 276          
BLAST of mRNA_H-paniculata_contig793.15960.1 vs. uniprot
Match: A0A8B7FKK9_MICMU (E3 ubiquitin-protein ligase MYLIP isoform X2 n=3 Tax=Boreoeutheria TaxID=1437010 RepID=A0A8B7FKK9_MICMU)

HSP 1 Score: 57.8 bits (138), Expect = 2.190e-8
Identity = 23/40 (57.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    6 QVCFERKVDCTLVPCGHHCCCLICAAQFELCPVCRAPVEQ 45
             VC E +++ T  PCGH  CC  CAAQ +LCPVCR+PVE 
Sbjct:  333 MVCCEEEINSTFCPCGHTVCCESCAAQLQLCPVCRSPVEH 372          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig793.15960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDN0_ECTSI2.660e-2486.00Zinc finger protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KTC5_9PHAE6.230e-2291.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF6_ECTSI4.280e-1864.71RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KTY3_9PHAE5.630e-1667.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUU5_9PHAE7.380e-1358.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF4_ECTSI1.230e-1156.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI001ED878BD7.100e-1056.82E3 ubiquitin-protein ligase LRSAM1-like isoform X3... [more]
UPI001ED8B1847.120e-1056.82E3 ubiquitin-protein ligase LRSAM1-like isoform X1... [more]
A0A7S3G327_9EUKA1.300e-848.84Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A8B7FKK9_MICMU2.190e-857.50E3 ubiquitin-protein ligase MYLIP isoform X2 n=3 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 7..45
e-value: 1.4E-9
score: 37.7
NoneNo IPR availablePANTHERPTHR14879:SF5E3 UBIQUITIN-PROTEIN LIGASE CBLAcoord: 6..49
NoneNo IPR availablePANTHERPTHR14879CASPASE REGULATOR, RING FINGER DOMAIN-CONTAININGcoord: 6..49
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 7..46
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 3..51
e-value: 6.1E-12
score: 46.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 7..40
score: 9.022

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig793contigH-paniculata_contig793:635..793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig793.15960.1mRNA_H-paniculata_contig793.15960.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig793 635..793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig793.15960.1 ID=prot_H-paniculata_contig793.15960.1|Name=mRNA_H-paniculata_contig793.15960.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
CYSTFQVCFERKVDCTLVPCGHHCCCLICAAQFELCPVCRAPVEQKIRAI
TV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING