prot_H-paniculata_contig7925.15955.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7925.15955.1
Unique Nameprot_H-paniculata_contig7925.15955.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length231
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7925.15955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 36..127
e-value: 1.4E-7
score: 33.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 47..90
score: 9.244
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 39..96
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 133..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7925contigH-paniculata_contig7925:5564..6256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7925.15955.1mRNA_H-paniculata_contig7925.15955.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7925 5518..6704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7925.15955.1 ID=prot_H-paniculata_contig7925.15955.1|Name=mRNA_H-paniculata_contig7925.15955.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=231bp
MVPVPGGSLTISLTTPGGQSPRPLPSPSSPPDSPRGTVGPLPPEDTCAVF
LAALDRPIASFDGCDHSLHTACFTQLRIRASWNSTCPTCRALVDQATVTD
QLMEEYGRVVIEAALAAAESGRGDTTSREFGRRDEVDCGMCWDSMPRLTS
VPLGCGCWLHPRCLLGRLEDASDRGDTRMSCPDRGHASRTPYDIEPALQR
IRYATTGSDMQPVESLILQSRITSAEAALS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING