prot_H-paniculata_contig79.15923.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig79.15923.1
Unique Nameprot_H-paniculata_contig79.15923.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length608
Homology
BLAST of mRNA_H-paniculata_contig79.15923.1 vs. uniprot
Match: D8LF09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF09_ECTSI)

HSP 1 Score: 431 bits (1108), Expect = 8.310e-142
Identity = 270/536 (50.37%), Postives = 339/536 (63.25%), Query Frame = 0
Query:   98 STTPASNYQITRPRWYNKNEAGIIVLLVQRLRLLDVRGVEHMLEAVDAYREVDTDDVLERALFLMKIAPGANFRTVIARHPRTLLVPRARMKRVCEIISDAFPXXXXXXXXXXXXSIFSRNATRLERNIQGIKDYVPEVDSAIFQAAPSMMYIPPNTIKEKVEALRHHLPGVNLYTVMKGMPTVLSRSSSTVPRGLDALRERFPSATDQNLVRLVEAAPGLMRMSGVNGTLDVKVSALTDLLPGVNVTNVFSNAPGVLIRSLDSLPAXXXXXXXXXXXXXXXXXXXXXXXXXYLDIDRTIKPKALWIKEVVGLDQDGLDTLVETGPWLLKAGWGPLARLEFAIHSGLGGNGDKMANSLLVGLVRRSRVAFAAAHHPAYANFLRKRLQDE-------EG-----EGKVL--------AEGGGADS-------------DGEFSVSATSESAFTTTDETGGSGGDKGIVEGLEGDNGAENGDEQDLMEATFKEVGQLEDCLGRWRKARLGGVKDRPPNLGRVRSAPIGSIELKRIEDE 600
            ++  AS YQITRPRWYNK E  IIVLL QRLR++D++GVEHML+A   + + D  DV +RAL+L K APGANFRTVI RHPRTLLVP  +M+ V  ++     XXXXXXXXXXXX     N TRLE NI G+K Y PEV+SAIFQAAPSM+Y+P +T++EKV ALR  LPG++LY  +KGMPT L+RS  TVPRG+D LRERFPSA+++ LVR+VE+AP L+RMSG NG+L +KV+ L +L P  NVT + S  PG++                                  YLD+DRT++ KA+WI++ VGLDQ+GLD LVE GPWLLKAGWGPLARLEFAI +G+    D+   S +  LVRRSR+AFA AHH +Y +FLRK+L++E       EG     EG  L        A G   D               G  + SAT     T   E  G+    G+V  LE  +G E  D+  LME T  EV  LED LGR RK+RLGGVKDRPPN G+   +P+  ++  R E +
Sbjct:   18 TSNSASGYQITRPRWYNKAEVAIIVLLCQRLRMIDLKGVEHMLDAAPKFAKEDPRDVWQRALYLSKAAPGANFRTVIQRHPRTLLVPVHKMQHVLSLLXXXXXXXXXXXXXXXXXXXXXXNTTRLEDNIAGLKKYAPEVNSAIFQAAPSMVYLPAHTVEEKVAALRACLPGIDLYNFLKGMPTALARSKQTVPRGMDQLRERFPSASNRELVRIVESAPSLVRMSGANGSLSIKVTKLQELFPSANVTKMVSRTPGIM----------------------------------YLDVDRTVRSKAMWIQQAVGLDQEGLDRLVEQGPWLLKAGWGPLARLEFAIEAGVA-TVDRP--STIFSLVRRSRLAFARAHHESYGSFLRKKLEEEAIELGGREGXXXXXEGGDLHHPLAWRAAAGNAVDGGRRVSRPVSPKKGSGPKAASATLGGKRTARLENAGA--TPGVV--LESGDGKEE-DQDALMERTALEVAGLEDALGRGRKSRLGGVKDRPPNPGQ---SPLARLQGSRHEGD 508          
BLAST of mRNA_H-paniculata_contig79.15923.1 vs. uniprot
Match: A0A6H5K0X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0X3_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 5.260e-84
Identity = 183/431 (42.46%), Postives = 235/431 (54.52%), Query Frame = 0
Query:  247 MMYIPPNTIKEKVEALRHHLPGVNLYTVMKGMPTVLSRSSSTVPRGLDALRERFPSATDQNLVRLVEAAPGLMRMSGVNGTLDVKVSA-------------LTDLLPGVNVTNVFSNAPGVLIRSLDSLPAXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------YLDIDRTIKPKALWIKEVVGLDQDGLDTLVETGPWLLKAGWGPLARLEFAIHSGLGGNGDKMANSLLVGLVRRSRVAFAAAHHPAYANFLRKRLQDE------------------------------EGEGKVLAEGGGADSDGEFSVSATSESAFTTTDETGGSGGDKGIVEGLEGDNGAENGDEQDLMEATFKEVGQLEDCLGRWRKARLGGVKDRPPNLGRVRSAPIGSIELKRIEDE 600
            M+Y+P +T++EKV ALR  LPG++LY  +KGMPT L+RS  TVPRG+D LRERFPSA+++ LVR+VE+AP L+RMSG NG+L +K SA             L  LLPGVNVTNV SNAPGVLIR + SLP                                                            YLD+DRT++ KA+WI++ VGLDQ+GLD LVE GPWLLKAGWGPLARLEFAI +G+    D+   S +  LVRRSR+AFA A+H +Y +FLRK++++E                              EG  +V          G  + SAT +   T   E  G+    G+V  LE  +G E  D+  LME T  EV  LED LGR RK+RLGGVKDRPPN G+    P+  ++  + E +
Sbjct:    1 MVYLPAHTVEEKVAALRACLPGIDLYNFLKGMPTALARSKQTVPRGMDQLRERFPSASNRELVRIVESAPSLVRMSGANGSLSIKASAERHFFVSVPTVDNLMSLLPGVNVTNVISNAPGVLIRGVTSLPTKDGAILSEQPPASFLCDHAFKTMTMVSQPRSHAGQVTKLQELFPSANVTKMVSRTPGIMYLDVDRTVRSKAMWIQQAVGLDQEGLDRLVEQGPWLLKAGWGPLARLEFAIEAGVA-TVDRP--STIFSLVRRSRLAFARAYHESYGSFLRKKIEEEAIEQGXXXXXXXXXDLRHPLAWRAAAGNDVEGGRRVSRPVSPKKGSGPTAASATLDGKRTAKLEHAGA--TAGVV--LESGDGKE--DKDALMERTALEVAGLEDALGRGRKSRLGGVKDRPPNPGQT---PLARLQGSQHEGD 419          
BLAST of mRNA_H-paniculata_contig79.15923.1 vs. uniprot
Match: A0A6H5K0J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J9_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 1.440e-22
Identity = 57/105 (54.29%), Postives = 68/105 (64.76%), Query Frame = 0
Query:   98 STTPASN----YQITRPRWYNKNEAGIIVLLVQRLRLLDVRGVEHMLEAVDAYREVDT-----------DDVLERALFLMKIAPGANFRTVIARHPRTLLVPRAR 187
            +  PASN    YQITRPRWYNK E  IIVLL QRLR++D++GVEHML+A   + + D             DV +RAL+L K APGANFRTVI RHPR   V R +
Sbjct:   14 AVAPASNSASAYQITRPRWYNKAEVAIIVLLCQRLRMIDLKGVEHMLDAAPKFAKEDPVREPVRSLKLQRDVWQRALYLSKAAPGANFRTVIQRHPRVRRVFRVK 118          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig79.15923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LF09_ECTSI8.310e-14250.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0X3_9PHAE5.260e-8442.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0J9_9PHAE1.440e-2254.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 307..456
e-value: 1.1E-7
score: 33.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..607
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.538

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig79contigH-paniculata_contig79:31123..37902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig79.15923.1mRNA_H-paniculata_contig79.15923.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig79 30903..38173 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig79.15923.1 ID=prot_H-paniculata_contig79.15923.1|Name=mRNA_H-paniculata_contig79.15923.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=608bp
MLLLAVGWLVTAQAFFSPSAPIRVSGYPPTKSTLTSKTRDTHATGNFNSY
TLGCMRGSGSSSEQAAATDTGVSLLASNDNSSSFIDATFLAERIPLESTT
PASNYQITRPRWYNKNEAGIIVLLVQRLRLLDVRGVEHMLEAVDAYREVD
TDDVLERALFLMKIAPGANFRTVIARHPRTLLVPRARMKRVCEIISDAFP
GANMARIVERIPSIFSRNATRLERNIQGIKDYVPEVDSAIFQAAPSMMYI
PPNTIKEKVEALRHHLPGVNLYTVMKGMPTVLSRSSSTVPRGLDALRERF
PSATDQNLVRLVEAAPGLMRMSGVNGTLDVKVSALTDLLPGVNVTNVFSN
APGVLIRSLDSLPAKVNKLETLFPSANVTKMVSRTPGILYLDIDRTIKPK
ALWIKEVVGLDQDGLDTLVETGPWLLKAGWGPLARLEFAIHSGLGGNGDK
MANSLLVGLVRRSRVAFAAAHHPAYANFLRKRLQDEEGEGKVLAEGGGAD
SDGEFSVSATSESAFTTTDETGGSGGDKGIVEGLEGDNGAENGDEQDLME
ATFKEVGQLEDCLGRWRKARLGGVKDRPPNLGRVRSAPIGSIELKRIEDE
LDARRAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf