prot_H-paniculata_contig78855.15907.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig78855.15907.1
Unique Name	prot_H-paniculata_contig78855.15907.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	154

Homology

[Close]

BLAST of mRNA_H-paniculata_contig78855.15907.1 vs. uniprot
Match: A0A6H5K523_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K523_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.520e-16
Identity = 50/152 (32.89%), Postives = 80/152 (52.63%), Query Frame = 0

Query:    1 NGQLAWDGLIAKYQNSSKQRRRILIRQLDGMAMKQDQDPDVFLAHVFQLRGELAHMGEEHSEERLTDIVLEGLTDAYEQIKYNAERDPDFSINEIEATMHNMFANHVVREGSPRKSGGRESAMVATTSASKSVKFKGKCHSCGKVGHVMRDC 152
            +GQ A+  L A Y   + +  R  +  L+   M+  ++PD F     +LR +LA MGE  S+ R+ DI ++G ++ Y+ IK    RDP F + +++ATM N+F +  +R+ +  +  GR  AM   TS          C  C + GHV R+C
Sbjct:   70 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLAKMGENISDRRIKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP-------ICFECNEPGHVRRNC 214

[Close]

BLAST of mRNA_H-paniculata_contig78855.15907.1 vs. uniprot
Match: A0A6H5JXA1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA1_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 6.900e-16
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0

Query:    1 NGQLAWDGLIAKYQNSSKQRRRILIRQLDGMAMKQDQDPDVFLAHVFQLRGELAHMGEEHSEERLTDIVLEGLTDAYEQIKYNAERDPDFSINEIEATMHNMFANHVVREGSPRKSGGRESAMVATTSASKSVKFKGKCHSCGKVGHVMRDC 152
            +GQ A+  L A Y   + +  R  +  L+   M+  ++PD F     +LR +L  MGE  S+ R  DI ++G ++ Y+ IK    RDP F + +++ATM N+F +  +R+ +  +  GR  AM   TS          C  C + GHV R+C
Sbjct:  112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP-------ICFECNEPGHVRRNC 256

[Close]

BLAST of mRNA_H-paniculata_contig78855.15907.1 vs. uniprot
Match: A0A6H5JUN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN9_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.220e-15
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0

Query:    1 NGQLAWDGLIAKYQNSSKQRRRILIRQLDGMAMKQDQDPDVFLAHVFQLRGELAHMGEEHSEERLTDIVLEGLTDAYEQIKYNAERDPDFSINEIEATMHNMFANHVVREGSPRKSGGRESAMVATTSASKSVKFKGKCHSCGKVGHVMRDC 152
            +GQ A+  L A Y   + +  R  +  L+   M+  ++PD F     +LR +L  MGE  S+ R  DI ++G ++ Y+ IK    RDP F + +++ATM N+F +  +R+ +  +  GR  AM   TS          C  C + GHV R+C
Sbjct:  131 DGQAAFAELKANYNRLTDEAIRAELDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP-------ICFECNEPGHVRRNC 275

[Close]

BLAST of mRNA_H-paniculata_contig78855.15907.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.830e-15
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0

Query:    1 NGQLAWDGLIAKYQNSSKQRRRILIRQLDGMAMKQDQDPDVFLAHVFQLRGELAHMGEEHSEERLTDIVLEGLTDAYEQIKYNAERDPDFSINEIEATMHNMFANHVVREGSPRKSGGRESAMVATTSASKSVKFKGKCHSCGKVGHVMRDC 152
            +GQ A+  L A Y   + +  R  +  L+   M+  ++PD F     +LR +L  MGE  S+ R  DI ++G ++ Y+ IK    RDP F + +++ATM N+F +  +R+ +  +  GR  AM   TS          C  C + GHV R+C
Sbjct:  112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP-------ICFECNEPGHVRRNC 256

[Close]

BLAST of mRNA_H-paniculata_contig78855.15907.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.900e-15
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0

Query:    1 NGQLAWDGLIAKYQNSSKQRRRILIRQLDGMAMKQDQDPDVFLAHVFQLRGELAHMGEEHSEERLTDIVLEGLTDAYEQIKYNAERDPDFSINEIEATMHNMFANHVVREGSPRKSGGRESAMVATTSASKSVKFKGKCHSCGKVGHVMRDC 152
            +GQ A+  L A Y   + +  R  +  L+   M+  ++PD F     +LR +L  MGE  S+ R  DI ++G ++ Y+ IK    RDP F + +++ATM N+F +  +R+ +  +  GR  AM   TS          C  C + GHV R+C
Sbjct:  112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP-------ICFECNEPGHVRRNC 256

[Close]

BLAST of mRNA_H-paniculata_contig78855.15907.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.980e-15
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0

Query:    1 NGQLAWDGLIAKYQNSSKQRRRILIRQLDGMAMKQDQDPDVFLAHVFQLRGELAHMGEEHSEERLTDIVLEGLTDAYEQIKYNAERDPDFSINEIEATMHNMFANHVVREGSPRKSGGRESAMVATTSASKSVKFKGKCHSCGKVGHVMRDC 152
            +GQ A+  L A Y   + +  R  +  L+   M+  ++PD F     +LR +L  MGE  S+ R  DI ++G ++ Y+ IK    RDP F + +++ATM N+F +  +R+ +  +  GR  AM   TS          C  C + GHV R+C
Sbjct:  112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRVFAMATKTSGP-------ICFECNEPGHVRRNC 256

[Close]

BLAST of mRNA_H-paniculata_contig78855.15907.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 3.040e-15
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0

Query:    1 NGQLAWDGLIAKYQNSSKQRRRILIRQLDGMAMKQDQDPDVFLAHVFQLRGELAHMGEEHSEERLTDIVLEGLTDAYEQIKYNAERDPDFSINEIEATMHNMFANHVVREGSPRKSGGRESAMVATTSASKSVKFKGKCHSCGKVGHVMRDC 152
            +GQ A+  L A Y   + +  R  +  L+   M+  ++PD F     +LR +L  MGE  S+ R  DI ++G ++ Y+ IK    RDP F + +++ATM N+F +  +R+ +  +  GR  AM   TS          C  C + GHV R+C
Sbjct:  112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP-------ICFECNEPGHVRRNC 256

[Close]

BLAST of mRNA_H-paniculata_contig78855.15907.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 3.040e-15
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0

Query:    1 NGQLAWDGLIAKYQNSSKQRRRILIRQLDGMAMKQDQDPDVFLAHVFQLRGELAHMGEEHSEERLTDIVLEGLTDAYEQIKYNAERDPDFSINEIEATMHNMFANHVVREGSPRKSGGRESAMVATTSASKSVKFKGKCHSCGKVGHVMRDC 152
            +GQ A+  L A Y   + +  R  +  L+   M+  ++PD F     +LR +L  MGE  S+ R  DI ++G ++ Y+ IK    RDP F + +++ATM N+F +  +R+ +  +  GR  AM   TS          C  C + GHV R+C
Sbjct:  112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP-------ICFECNEPGHVRRNC 256

[Close]

BLAST of mRNA_H-paniculata_contig78855.15907.1 vs. uniprot
Match: A0A6H5JTQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ0_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 3.120e-15
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0

Query:    1 NGQLAWDGLIAKYQNSSKQRRRILIRQLDGMAMKQDQDPDVFLAHVFQLRGELAHMGEEHSEERLTDIVLEGLTDAYEQIKYNAERDPDFSINEIEATMHNMFANHVVREGSPRKSGGRESAMVATTSASKSVKFKGKCHSCGKVGHVMRDC 152
            +GQ A+  L A Y   + +  R  +  L+   M+  ++PD F     +LR +L  MGE  S+ R  DI ++G ++ Y+ IK    RDP F + +++ATM N+F +  +R+ +  +  GR  AM   TS          C  C + GHV R+C
Sbjct:  112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP-------ICFECNEPGHVRRNC 256

[Close]

BLAST of mRNA_H-paniculata_contig78855.15907.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 3.120e-15
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0

Query:    1 NGQLAWDGLIAKYQNSSKQRRRILIRQLDGMAMKQDQDPDVFLAHVFQLRGELAHMGEEHSEERLTDIVLEGLTDAYEQIKYNAERDPDFSINEIEATMHNMFANHVVREGSPRKSGGRESAMVATTSASKSVKFKGKCHSCGKVGHVMRDC 152
            +GQ A+  L A Y   + +  R  +  L+   M+  ++PD F     +LR +L  MGE  S+ R  DI ++G ++ Y+ IK    RDP F + +++ATM N+F +  +R+ +  +  GR  AM   TS          C  C + GHV R+C
Sbjct:  112 DGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP-------ICFECNEPGHVRRNC 256

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig78855.15907.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig78855.15907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K523_9PHAE	2.520e-16	32.89	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JXA1_9PHAE	6.900e-16	32.24	CCHC-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5JUN9_9PHAE	2.220e-15	32.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KN28_9PHAE	2.830e-15	32.24	Uncharacterized protein (Fragment) n=3 Tax=Ectocar...	[more]
A0A6H5KJB9_9PHAE	2.900e-15	32.24	Uncharacterized protein (Fragment) n=2 Tax=Ectocar...	[more]
A0A6H5K4S9_9PHAE	2.980e-15	32.24	CCHC-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5K3T5_9PHAE	3.040e-15	32.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L1Z9_9PHAE	3.040e-15	32.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JTQ0_9PHAE	3.120e-15	32.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KHG5_9PHAE	3.120e-15	32.24	Uncharacterized protein n=11 Tax=Ectocarpus sp. CC...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 138..154 e-value: 4.1E-4 score: 29.7
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 137..153 e-value: 4.4E-5 score: 23.4
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 138..154 score: 9.966
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 5..97 e-value: 9.8E-12 score: 44.7
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 135..153

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig78855	contig	H-paniculata_contig78855:75..536 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig78855.15907.1	mRNA_H-paniculata_contig78855.15907.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig78855 75..536 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig78855.15907.1 ID=prot_H-paniculata_contig78855.15907.1|Name=mRNA_H-paniculata_contig78855.15907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp
NGQLAWDGLIAKYQNSSKQRRRILIRQLDGMAMKQDQDPDVFLAHVFQLR
GELAHMGEEHSEERLTDIVLEGLTDAYEQIKYNAERDPDFSINEIEATMH
NMFANHVVREGSPRKSGGRESAMVATTSASKSVKFKGKCHSCGKVGHVMR
DCRS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001878	Znf_CCHC
IPR036875	Znf_CCHC_sf