prot_H-paniculata_contig7879.15897.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7879.15897.1
Unique Nameprot_H-paniculata_contig7879.15897.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length92
Homology
BLAST of mRNA_H-paniculata_contig7879.15897.1 vs. uniprot
Match: D8LK78_ECTSI (Ubiquinol cytochrome c reductase subunit QCR7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK78_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 4.280e-25
Identity = 53/82 (64.63%), Postives = 63/82 (76.83%), Query Frame = 0
Query:   10 GLKYEDVFNEEIPVVKEAIRRLAPEQRLARERRLFRAADISLKRVPLPDHIQKAHDPFELYLDEKIQEVQAEWDERELLNSR 91
            GLK++D+  EE P V EA+RRL PEQ+LAR+RR FRA DISLK+ PLPDHIQ   DPFE YL + I+EV+ E  ERELLN R
Sbjct:   32 GLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLNQR 113          
BLAST of mRNA_H-paniculata_contig7879.15897.1 vs. uniprot
Match: A0A7R9U2G2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2G2_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.160e-15
Identity = 38/81 (46.91%), Postives = 59/81 (72.84%), Query Frame = 0
Query:   10 GLKYEDVFNEEIPVVKEAIRRLAPEQRLARERRLFRAADISLKRVPLPDHIQKAHDPFELYLDEKIQEVQAEWDERELLNS 90
            GL+Y+DV NE +P V+EA+ RL PE+++ R+RRL RA D+S K+  +P+ +Q  +DPF+ YL +  ++   E DERE+LN+
Sbjct:   64 GLRYDDVVNEALPSVQEALTRLTPEEKVGRDRRLKRALDLSFKKKTMPEEMQN-YDPFQKYLYDHKEKALKEQDEREILNN 143          
BLAST of mRNA_H-paniculata_contig7879.15897.1 vs. uniprot
Match: A0A7S1TZX9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZX9_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.060e-15
Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 0
Query:   10 GLKYEDVFNEEIPVVKEAIRRLAPEQRLARERRLFRAADISLKRVPLPDHIQKAHDPFELYLDEKIQEVQAEWDERELLN 89
            GLKY+DV NE +P V+EA+ RL PE+++AR+RR+ RA D+S K+  +P+       PFE YL +  Q+VQ E DERE+LN
Sbjct:   75 GLKYDDVLNEALPSVQEAVARLDPEEKIARDRRMKRAIDLSFKKKGMPEGSDGK--PFENYLYDHQQKVQEEQDEREILN 152          
BLAST of mRNA_H-paniculata_contig7879.15897.1 vs. uniprot
Match: A0A4D9D4E8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4E8_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.080e-14
Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    3 LGVVLSSGLKYEDVFNEEIPVVKEAIRRLAPEQRLARERRLFRAADISLKRVPLPDHIQKAHDPFELYLDEKIQEVQAEWDERELLN 89
            +G + + GL+Y+D+F E+  V K AI  L+PE++LARERR+ RA +ISLK+  LP  +QK   P + YL   + EV+AE  ER+LLN
Sbjct:   20 VGELNNYGLRYQDLFLEDQAVTK-AIHHLSPEEQLARERRIKRAIEISLKKKYLPADLQKMQTPLKPYLSHALDEVEAEETERKLLN 105          
BLAST of mRNA_H-paniculata_contig7879.15897.1 vs. uniprot
Match: W7U788_9STRA (Mitochondrial trna import complex n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U788_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.440e-13
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    3 LGVVLSSGLKYEDVFNEEIPVVKEAIRRLAPEQRLARERRLFRAADISLKRVPLPDHIQKAHDPFELYLDEKIQEVQAEWDERELLN 89
            +G + + GL+Y+D+F E+  V K AI  L+PE+++ARERR+ RA +ISLK+  LP  +QK   P + YL   + EV+AE  ER+LLN
Sbjct:   57 VGELNNYGLRYQDLFLEDQAVTK-AIHHLSPEEQVARERRIKRAIEISLKKKYLPADLQKMQTPLKPYLSHALDEVEAEETERKLLN 142          
BLAST of mRNA_H-paniculata_contig7879.15897.1 vs. uniprot
Match: A0A087SK28_AUXPR (Cytochrome b-c1 complex subunit 7 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SK28_AUXPR)

HSP 1 Score: 67.4 bits (163), Expect = 2.190e-12
Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 0
Query:   10 GLKYEDVFNEEIPV-VKEAIRRLAPEQRLARERRLFRAADISLKRVPLPDHIQKAHDPFELYLDEKIQEVQAEWDERELLNS 90
            GL+YED+++ E  +   EA+RRL+P++  AR +RL R  D+S+K   LP  IQ+   PF  YLDE + +V+AE +ER+ L S
Sbjct:   36 GLRYEDLYDPEFDLDTAEALRRLSPDEVHARNQRLKRGMDMSMKHSELPHEIQEQQTPFNFYLDETLAQVKAENEERKQLGS 117          
BLAST of mRNA_H-paniculata_contig7879.15897.1 vs. uniprot
Match: A0A485LT21_9STRA (Aste57867_25145 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LT21_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 6.980e-12
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   10 GLKYEDVFNEEIPVVKEAIRRLAPEQRLARERRLFRAADISLKRVPLPDHIQKAHDPFELYLDEKIQEVQAEWDERELL 88
            GL+Y+D   E   V + A+  L  +Q ++R RRL RAAD+S KR  LP+ IQK  +PF  YLD+K++E ++  DER  L
Sbjct:   22 GLRYDDALVETAEV-QRAVSWLGRDQAISRSRRLTRAADLSFKRAYLPEEIQKIQEPFNFYLDDKVEEARSLADERNKL 99          
BLAST of mRNA_H-paniculata_contig7879.15897.1 vs. uniprot
Match: A0A067CMG3_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CMG3_SAPPC)

HSP 1 Score: 65.1 bits (157), Expect = 9.650e-12
Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = 0
Query:   10 GLKYEDVFNEEIPVVKEAIRRLAPEQRLARERRLFRAADISLKRVPLPDHIQKAHDPFELYLDEKIQEVQAEWDERELL 88
            GL+Y+D    E+  V +A+  L  E+++AR+RRL RA+D+S KR  LP+ IQ   +P   YLD+K++E++   DER  L
Sbjct:   21 GLRYDDAL-VEVAEVNKAVSWLGKEEKVARQRRLVRASDLSFKRAYLPEDIQAIQEPMNFYLDDKVEEIRKLGDERNKL 98          
BLAST of mRNA_H-paniculata_contig7879.15897.1 vs. uniprot
Match: A0A835YW04_9STRA (Cytochrome b-c1 complex subunit 7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW04_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.620e-11
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 0
Query:    4 GVVLSSGLKYEDVFNEEIPVVKEAIRRLAPEQRLARERRLFRAADISLKRVPLPDHIQKAHDPFELYLDEKIQEVQAEWDERELLN 89
            G +   GLKY+D+  E    V  A+ R  P    AR RRL RA+D+SLK+ PLP HIQ+  +PF+ YL   I+E + E +ER  +N
Sbjct:   19 GTLKEYGLKYQDLLIE-YDDVNTALERADPALVQARNRRLARASDVSLKQKPLPPHIQELQNPFDFYLTPLIEEAKKEREERAAIN 103          
BLAST of mRNA_H-paniculata_contig7879.15897.1 vs. uniprot
Match: A0A6P6STS5_COFAR (Cytochrome b-c1 complex subunit 7 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6STS5_COFAR)

HSP 1 Score: 60.5 bits (145), Expect = 1.080e-9
Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   10 GLKYEDVFN--EEIPVVKEAIRRLAPEQRLARERRLFRAADISLKRVPLPDHIQKAHDPFELYLDEKIQEVQAEWDERELLNS 90
            GL+Y+D+++  E++ + KEA+RRL PE   AR +RL RA D+S+K   LP+H+Q    PF  YL + +  V+ E  ERE L +
Sbjct:   35 GLRYDDLYDLLEDMDI-KEALRRLPPEVVDARNQRLLRAMDLSMKHQYLPEHLQAQQTPFRSYLKDMLALVKRERAEREALGA 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7879.15897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK78_ECTSI4.280e-2564.63Ubiquinol cytochrome c reductase subunit QCR7 n=2 ... [more]
A0A7R9U2G2_9STRA1.160e-1546.91Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1TZX9_9STRA2.060e-1551.25Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A4D9D4E8_9STRA2.080e-1448.28Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U788_9STRA1.440e-1347.13Mitochondrial trna import complex n=1 Tax=Nannochl... [more]
A0A087SK28_AUXPR2.190e-1245.12Cytochrome b-c1 complex subunit 7 n=2 Tax=Auxenoch... [more]
A0A485LT21_9STRA6.980e-1245.57Aste57867_25145 protein n=1 Tax=Aphanomyces stella... [more]
A0A067CMG3_SAPPC9.650e-1243.04Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A835YW04_9STRA1.620e-1144.19Cytochrome b-c1 complex subunit 7 n=1 Tax=Tribonem... [more]
A0A6P6STS5_COFAR1.080e-943.37Cytochrome b-c1 complex subunit 7 n=3 Tax=Coffea T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003197Cytochrome b-c1 complex subunit 7PFAMPF02271UCR_14kDcoord: 9..86
e-value: 1.8E-19
score: 69.6
IPR003197Cytochrome b-c1 complex subunit 7PANTHERPTHR12022UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEINcoord: 9..89
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyGENE3D1.10.1090.10coord: 5..91
e-value: 1.8E-18
score: 68.3
IPR036544Cytochrome b-c1 complex subunit 7 superfamilySUPERFAMILY8152414 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 9..89
NoneNo IPR availablePANTHERPTHR12022:SF0CYTOCHROME B-C1 COMPLEX SUBUNIT 7coord: 9..89
NoneNo IPR availablePRODOMPD008153coord: 10..88
e-value: 2.0E-4
score: 100.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7879contigH-paniculata_contig7879:8347..9397 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7879.15897.1mRNA_H-paniculata_contig7879.15897.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7879 8347..10356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7879.15897.1 ID=prot_H-paniculata_contig7879.15897.1|Name=mRNA_H-paniculata_contig7879.15897.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
MSLGVVLSSGLKYEDVFNEEIPVVKEAIRRLAPEQRLARERRLFRAADIS
LKRVPLPDHIQKAHDPFELYLDEKIQEVQAEWDERELLNSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003197QCR7
IPR036544QCR7_sf