prot_H-paniculata_contig7847.15873.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7847.15873.1
Unique Nameprot_H-paniculata_contig7847.15873.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length285
Homology
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BLAST of mRNA_H-paniculata_contig7847.15873.1 vs. uniprot
Match: D7FWM3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM3_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 2.900e-39
Identity = 87/151 (57.62%), Postives = 104/151 (68.87%), Query Frame = 0 
Query:   93 SEEQAAWLRRIQYYGGRRMWLKAEDKFEQMQNEGVQPTLAICNGLLEAYLQSGRYVNAVGFLEDICLGNIVGNSATGSTINDDDNDQGREPSIDA-GSNQCATGTSTAAPRDAAPAPTEIFPNVHTFNLVLATLATRGKWKKALEISAPMR 242
            SEEQ AWL R+ YYGGR+MW KAEDKF+QMQ+EGV PTL +CN L+EAYL+  RYVNAVGFLED+CLGNI+ + A        D  +G + S  A GS             + A A   I PN+ TFNLVLATLA+ GKWKKAL++SAPMR
Sbjct:   86 SEEQVAWLGRLDYYGGRQMWRKAEDKFQQMQDEGVYPTLPLCNSLMEAYLKGKRYVNAVGFLEDLCLGNILSDVAH-------DGLRGAKVSPAASGSXXXXXXXXXXEAGETAVATAPIVPNLRTFNLVLATLASAGKWKKALDVSAPMR 229
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7847.15873.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWM3_ECTSI2.900e-3957.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..285
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 130..164
score: 5.974
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 214..248
score: 8.78
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 95..129
score: 7.563

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7847contigH-paniculata_contig7847:3654..6826 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7847.15873.1mRNA_H-paniculata_contig7847.15873.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7847 3654..6854 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7847.15873.1 ID=prot_H-paniculata_contig7847.15873.1|Name=mRNA_H-paniculata_contig7847.15873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=285bp
MTRPHRHKVNVRSVPSTVLLLVRRFSTAHGVATSSSFAFLHAARGFHVSE
ATWGRASLHGRATRAAKAKVPPVAILASPNTDSVRPSSTAELSEEQAAWL
RRIQYYGGRRMWLKAEDKFEQMQNEGVQPTLAICNGLLEAYLQSGRYVNA
VGFLEDICLGNIVGNSATGSTINDDDNDQGREPSIDAGSNQCATGTSTAA
PRDAAPAPTEIFPNVHTFNLVLATLATRGKWKKALEISAPMRKSFHTPGG
RSGDAKRQRGGGGGGRPGRRGAAAAAASATAAVAN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat