prot_H-paniculata_contig7838.15867.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7838.15867.1
Unique Nameprot_H-paniculata_contig7838.15867.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length231
Homology
BLAST of mRNA_H-paniculata_contig7838.15867.1 vs. uniprot
Match: D8LST0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST0_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 9.540e-75
Identity = 112/171 (65.50%), Postives = 134/171 (78.36%), Query Frame = 0
Query:    1 MASTLNKIISHKAVWHLIDARGQLVGRLANQIAPILRGKHKPTFCANEDCGDFVVVINAKDVEFSGKKWAGKIYKYHSGFPGGLKERPADWQLNRKPEEILRKAVMGMLPKNELRRRMTAKLRIYPGPCHLHEDQLPPDTAECLLVEQKRTFNDEVVEEVDELSPEEQAEW 171
            MA+TLN+II+HKA WHLIDA GQ+VGRLA QIAPI+RGKHKPTFC N+DCGD VVV+NA  VEF+G KW  K+Y++HSGFPGGLKERPAD QL RKPEEILR+AVMGMLPKN LR+RM  KL IYPGP H H+D+LP D+A+ LL +  R   D    ++ +   +   EW
Sbjct:    1 MATTLNRIINHKAKWHLIDASGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKVYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYPGPSHPHDDRLPTDSAQSLLEKSDRKLIDRRPTDIKKYQDDNYIEW 171          
BLAST of mRNA_H-paniculata_contig7838.15867.1 vs. uniprot
Match: A0A835ZK23_9STRA (Ribosomal protein L13 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK23_9STRA)

HSP 1 Score: 182 bits (463), Expect = 2.390e-55
Identity = 84/127 (66.14%), Postives = 102/127 (80.31%), Query Frame = 0
Query:   10 SHKAVWHLIDARGQLVGRLANQIAPILRGKHKPTFCANEDCGDFVVVINAKDVEFSGKKWAGKIYKYHSGFPGGLKERPADWQLNRKPEEILRKAVMGMLPKNELRRRMTAKLRIYPGPCHLHEDQL 136
            SH+ +WHL+DA+ Q+VGRLA QIAP+L GKHKPT+  N  CGD VVVINA DV+F+GKKW  K+Y++HSG+PGGLKER    QL R+PEEILR+AVMGMLPKN+LR RM  +L+IY GP H HE  L
Sbjct:   11 SHRPMWHLVDAKDQIVGRLATQIAPLLVGKHKPTYSPNVACGDIVVVINAADVQFTGKKWTDKVYRWHSGYPGGLKERTPKQQLERRPEEILRRAVMGMLPKNKLRSRMILQLKIYEGPAHPHEGDL 137          
BLAST of mRNA_H-paniculata_contig7838.15867.1 vs. uniprot
Match: A0A448Z8K8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8K8_9STRA)

HSP 1 Score: 166 bits (419), Expect = 2.880e-48
Identity = 82/132 (62.12%), Postives = 101/132 (76.52%), Query Frame = 0
Query:   10 SHKAVWHLIDARGQLVGRLANQIAPILRGKHKPTFCANEDCGDFVVVINAKDVEFSGKKWAGKIYKYHSGFPGGLKERPADWQLNRKPEEILRKAVMGMLPKNELRRR-MTAKLRIYPGPCHLHEDQLPPDT 140
            S +  WHL+DA+ Q VGRLA QI+ IL+GKHKPTF  N+D GD VVVINA+ V+FSGKKW  K+Y++HSG+PGGLKER A   + RKPEEIL+KAV+GML +N LR + +  +LRIY GP H H  QLPP T
Sbjct:    7 SLQRAWHLVDAKNQTVGRLAGQISQILKGKHKPTFRPNKDMGDHVVVINAEKVQFSGKKWNDKLYRWHSGYPGGLKERSARDMMARKPEEILKKAVLGMLKRNNLRHQSIEPRLRIYSGPDHPHTAQLPPGT 138          
BLAST of mRNA_H-paniculata_contig7838.15867.1 vs. uniprot
Match: A0A1E7F5Z3_9STRA (Ribosomal protein L13 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5Z3_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.280e-48
Identity = 78/132 (59.09%), Postives = 100/132 (75.76%), Query Frame = 0
Query:   10 SHKAVWHLIDARGQLVGRLANQIAPILRGKHKPTFCANEDCGDFVVVINAKDVEFSGKKWAGKIYKYHSGFPGGLKERPADWQLNRKPEEILRKAVMGMLPKNELRRR-MTAKLRIYPGPCHLHEDQLPPDT 140
            S +  WHL+DA  Q VGRLA QI+ IL+GKHKPTF  N+D GD V+VINA+ V FSGKKW  K+Y++H+G+PGGLKER A   + R+PEE+L+KA++GML +N LR + +  +LRIY GP H H  QLPPDT
Sbjct:    7 SLQRAWHLVDASNQTVGRLAGQISQILKGKHKPTFRPNKDMGDHVIVINAEKVHFSGKKWTDKVYRWHTGYPGGLKERSAKEMMERRPEEVLKKAILGMLKRNNLRHQSIEPRLRIYVGPDHPHTAQLPPDT 138          
BLAST of mRNA_H-paniculata_contig7838.15867.1 vs. uniprot
Match: A0A3F2S0U4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S0U4_9STRA)

HSP 1 Score: 164 bits (414), Expect = 5.340e-48
Identity = 74/119 (62.18%), Postives = 94/119 (78.99%), Query Frame = 0
Query:   12 KAVWHLIDARGQLVGRLANQIAPILRGKHKPTFCANEDCGDFVVVINAKDVEFSGKKWAGKIYKYHSGFPGGLKERPADWQLNRKPEEILRKAVMGMLPKNELRRRMTAKLRIYPGPCH 130
            K VWH++DA+GQ++GRLA+Q+APILRGKHKPT+  N DCGD+VVVINAKD+E +G KW  K+Y++H+G PGGLK+R A     RKPEE+LRKAV GMLPKN +R     KL+I+ G  H
Sbjct:    9 KVVWHVVDAKGQVLGRLASQLAPILRGKHKPTYAPNVDCGDYVVVINAKDIELTGNKWNNKLYRWHTGHPGGLKQRTAKDLFERKPEEVLRKAVFGMLPKNRMRALQDKKLKIFLGDEH 127          
BLAST of mRNA_H-paniculata_contig7838.15867.1 vs. uniprot
Match: A0A7S1CY61_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY61_CYCTE)

HSP 1 Score: 162 bits (409), Expect = 7.060e-47
Identity = 76/131 (58.02%), Postives = 99/131 (75.57%), Query Frame = 0
Query:   10 SHKAVWHLIDARGQLVGRLANQIAPILRGKHKPTFCANEDCGDFVVVINAKDVEFSGKKWAGKIYKYHSGFPGGLKERPADWQLNRKPEEILRKAVMGMLPKNELRRRMTAK-LRIYPGPCHLHEDQLPPD 139
            S +  WHL++A  Q VGRLA Q+A +L+GKHKPT+  N DCGDFVVV+NA+ V+FSGKKW  K+Y++H+G+PGGLK+R A+ QL + PE IL+KA++GML +N+LR     K LRIY G  H H  QLPPD
Sbjct:    7 SVQQAWHLVNAESQTVGRLATQVASLLKGKHKPTYRPNSDCGDFVVVVNAEKVDFSGKKWKDKLYRWHTGYPGGLKQRRAEEQLEKHPELILKKAILGMLTRNKLRHGYLEKRLRIYTGETHPHTAQLPPD 137          
BLAST of mRNA_H-paniculata_contig7838.15867.1 vs. uniprot
Match: H3G8X3_PHYRM (Uncharacterized protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3G8X3_PHYRM)

HSP 1 Score: 160 bits (405), Expect = 1.080e-46
Identity = 72/119 (60.50%), Postives = 92/119 (77.31%), Query Frame = 0
Query:   12 KAVWHLIDARGQLVGRLANQIAPILRGKHKPTFCANEDCGDFVVVINAKDVEFSGKKWAGKIYKYHSGFPGGLKERPADWQLNRKPEEILRKAVMGMLPKNELRRRMTAKLRIYPGPCH 130
            K  WH++DA+GQ++GRLA+Q+APILRGKHKPT+  N DCGDFVVVINAKD+  +G KW  K+Y++H+G PGGLK+R A     RKPE++LRKAV GMLPKN +R     KL+I+ G  H
Sbjct:    9 KVAWHVVDAKGQVLGRLASQLAPILRGKHKPTYAPNVDCGDFVVVINAKDIVLTGNKWNNKLYRWHTGHPGGLKQRTAKELFERKPEDVLRKAVFGMLPKNRMRALQDKKLKIFMGDEH 127          
BLAST of mRNA_H-paniculata_contig7838.15867.1 vs. uniprot
Match: A0A7S2UNE7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNE7_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.440e-46
Identity = 74/124 (59.68%), Postives = 97/124 (78.23%), Query Frame = 0
Query:   15 WHLIDARGQLVGRLANQIAPILRGKHKPTFCANEDCGDFVVVINAKDVEFSGKKWAGKIYKYHSGFPGGLKERPADWQLNRKPEEILRKAVMGMLPKNELRRR-MTAKLRIYPGPCHLHEDQLP 137
            WHL+DA+ Q VGRLA Q+APIL+GKHKPT+  + DCGD VV+INA+ V FSGKKW  K+Y++H+GFPGGLK+R A   L RKPE+IL+KA++GML + +LR + +  +L+IY GP H H  QLP
Sbjct:   20 WHLVDAQSQTVGRLATQLAPILKGKHKPTYKPHTDCGDIVVIINAEKVHFSGKKWNDKLYRWHTGFPGGLKQRTAKEMLQRKPEDILKKAILGMLSRTKLRHKYIEPRLKIYTGPIHPHSAQLP 143          
BLAST of mRNA_H-paniculata_contig7838.15867.1 vs. uniprot
Match: K3W736_GLOUD (Uncharacterized protein n=3 Tax=Oomycota TaxID=4762 RepID=K3W736_GLOUD)

HSP 1 Score: 159 bits (403), Expect = 2.170e-46
Identity = 73/125 (58.40%), Postives = 94/125 (75.20%), Query Frame = 0
Query:   12 KAVWHLIDARGQLVGRLANQIAPILRGKHKPTFCANEDCGDFVVVINAKDVEFSGKKWAGKIYKYHSGFPGGLKERPADWQLNRKPEEILRKAVMGMLPKNELRRRMTAKLRIYPGPCHLHEDQL 136
            K  WH++DA+GQ++GRLA+Q+APILRGKHKPTF  N DCGD+VVVINAKD+  +G KW  K+Y++H+G PGGLK+R A     RKPEE+LRKAV GMLPKN +R     KL+I+    H   +Q+
Sbjct:    9 KVAWHVVDAKGQVLGRLASQLAPILRGKHKPTFAPNVDCGDYVVVINAKDIVLTGNKWNNKLYRWHTGHPGGLKQRSAKELFERKPEEVLRKAVFGMLPKNRMRALQDKKLKIFMDEHHDFVEQV 133          
BLAST of mRNA_H-paniculata_contig7838.15867.1 vs. uniprot
Match: A0A7S4HN68_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HN68_9STRA)

HSP 1 Score: 160 bits (406), Expect = 2.270e-46
Identity = 73/123 (59.35%), Postives = 94/123 (76.42%), Query Frame = 0
Query:   15 WHLIDARGQLVGRLANQIAPILRGKHKPTFCANEDCGDFVVVINAKDVEFSGKKWAGKIYKYHSGFPGGLKERPADWQLNRKPEEILRKAVMGMLPKNELRRR-MTAKLRIYPGPCHLHEDQL 136
            WHLIDA  Q VGRLA  +APILRGKHKPT+  N DCGDFVV++NA+ V FSG KW  K+Y++H+G+PGGLKERPAD  L RKPE +L+KA++GM+ K  L+   +  +L++Y GP H H+ QL
Sbjct:   12 WHLIDAADQTVGRLAATVAPILRGKHKPTYRPNADCGDFVVIVNAEKVHFSGNKWKDKLYRWHTGYPGGLKERPADMMLERKPESVLQKAILGMVHKGNLKHGYIEPRLKVYAGPYHPHKSQL 134          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7838.15867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LST0_ECTSI9.540e-7565.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZK23_9STRA2.390e-5566.14Ribosomal protein L13 n=1 Tax=Tribonema minus TaxI... [more]
A0A448Z8K8_9STRA2.880e-4862.12Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7F5Z3_9STRA3.280e-4859.09Ribosomal protein L13 n=1 Tax=Fragilariopsis cylin... [more]
A0A3F2S0U4_9STRA5.340e-4862.18Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A7S1CY61_CYCTE7.060e-4758.02Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
H3G8X3_PHYRM1.080e-4660.50Uncharacterized protein n=24 Tax=Peronosporaceae T... [more]
A0A7S2UNE7_9STRA1.440e-4659.68Hypothetical protein n=1 Tax=Attheya septentrional... [more]
K3W736_GLOUD2.170e-4658.40Uncharacterized protein n=3 Tax=Oomycota TaxID=476... [more]
A0A7S4HN68_9STRA2.270e-4659.35Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 190..222
NoneNo IPR availablePANTHERPTHR11545:SF239S RIBOSOMAL PROTEIN L13, MITOCHONDRIALcoord: 6..184
IPR005823Ribosomal protein L13, bacterial-typeTIGRFAMTIGR01066TIGR01066coord: 12..137
e-value: 2.3E-47
score: 158.3
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10coord: 1..181
e-value: 4.2E-56
score: 191.3
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 10..136
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 15..137
e-value: 1.5E-50
score: 170.6
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 6..184
IPR005822Ribosomal protein L13HAMAPMF_01366Ribosomal_L13coord: 15..137
score: 27.242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7838contigH-paniculata_contig7838:4062..9880 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7838.15867.1mRNA_H-paniculata_contig7838.15867.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7838 3410..9928 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7838.15867.1 ID=prot_H-paniculata_contig7838.15867.1|Name=mRNA_H-paniculata_contig7838.15867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=231bp
MASTLNKIISHKAVWHLIDARGQLVGRLANQIAPILRGKHKPTFCANEDC
GDFVVVINAKDVEFSGKKWAGKIYKYHSGFPGGLKERPADWQLNRKPEEI
LRKAVMGMLPKNELRRRMTAKLRIYPGPCHLHEDQLPPDTAECLLVEQKR
TFNDEVVEEVDELSPEEQAEWDKFKAEAYAWQIEKFGKVLGGTEEENEAK
EREEEELEKKKALAARAKAKESRGPARKNP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005823Ribosomal_L13_bac-type
IPR036899Ribosomal_L13_sf
IPR005822Ribosomal_L13