prot_H-paniculata_contig7836.15862.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7836.15862.1
Unique Nameprot_H-paniculata_contig7836.15862.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length203
Homology
BLAST of mRNA_H-paniculata_contig7836.15862.1 vs. uniprot
Match: D8LI27_ECTSI (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI27_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 6.970e-75
Identity = 112/187 (59.89%), Postives = 138/187 (73.80%), Query Frame = 0
Query:   16 AMMVIPRCTGFLASSSSFSLRPSQVATRPTVTMAAGQGPKLDWVNVVSIDNAPAPGMAKSVFVADLDLCVAADSSGLLYVIGNKCPPANQPLSFSKVVDKTIKDPVLGTVVDLETGDVLDWCPSLLGKLLGPLLGPAPPNAGVVPYKVRSSGGNLQAYVQVNAKAQFEKQYWKGVLDAQGKADGGYY 202
            ++ ++  C GF+ ++     R    A++     A+G+     WV ++ ID AP PG AKSV+VADLDLCVAAD  GLLYV+GNKCPPANQPLSFS V +  IKDPVLGT +D+ETGDV++WCP+LLGKLL P+LG  P NAGV  + VR  GGNL+A V VNAKA+FEK YW G+LDAQGKADGGYY
Sbjct:   12 SVSLLAACNGFVTTAGVLPTRTRAQASQGLSMAASGE----QWVPILPIDEAPTPGTAKSVYVADLDLCVAADERGLLYVLGNKCPPANQPLSFSLVSNNIIKDPVLGTKIDIETGDVIEWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 194          
BLAST of mRNA_H-paniculata_contig7836.15862.1 vs. uniprot
Match: A0A6U3SB47_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3SB47_9STRA)

HSP 1 Score: 168 bits (426), Expect = 9.320e-50
Identity = 85/175 (48.57%), Postives = 112/175 (64.00%), Query Frame = 0
Query:   28 ASSSSFSLRPSQVATRPTVTMAAGQGPKLDWVNVVSIDNAPAPGMAKSVFVADLDLCVAADSSGLLYVIGNKCPPANQPLSFSKVVDKTIKDPVLGTVVDLETGDVLDWCPSLLGKLLGPLLGPAPPNAGVVPYKVRSSGGNLQAYVQVNAKAQFEKQYWKGVLDAQGKADGGYY 202
            A +S+F+  P+   +R T   A   GPKL ++  +S D+ PAPG A S     L +C+A D  G ++ +G+KCPP NQPLSF KVV  TI DPVLGT  DL+TG+V+ WCPS LGKL+G +  P     GV  Y V++ G ++   V VN KA FE  YW G+LDAQGK++G YY
Sbjct:   11 AGASAFA--PTAQVSRSTALNAKKVGPKLQYMPCISTDDLPAPGSATSGVAGGLAICIAVDEKGSVFALGDKCPPVNQPLSFGKVVGGTIADPVLGTQFDLKTGEVVSWCPSGLGKLIGGIFDPV----GVPVYPVQAKGKSVNVQVDVNYKANFEADYWSGILDAQGKSNGKYY 179          
BLAST of mRNA_H-paniculata_contig7836.15862.1 vs. uniprot
Match: A0A7S0AYK8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AYK8_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.480e-48
Identity = 86/178 (48.31%), Postives = 114/178 (64.04%), Query Frame = 0
Query:   27 LASSSSFSLRPSQVATRPTVTMAAGQ-GPKLDWVNVVSIDNAPAPGMAKSVFVADLDLCVAADSSGLLYVIGNKCPPANQPLSFSKVVDKTIKDPVLGTVVDLETGDVLD-WCPSLLGKLLGPLLGPAPPNAGVVPYKVRSSGGNLQAYVQVNAKAQFEKQYWKGVLDAQGKADGGYY 202
            +AS+++F+  P    TR    + AG+   K+ +V  + +D  PAPG A S     L +C+A D SG +Y +G+KCPP NQPLSF +V   +I+DPVLGT   L+TG+V+  WCPS +GKLLG L  P     GV  Y V+  G N++  V VNAKA FE QYW GVLDAQGK++G YY
Sbjct:   30 IASAAAFA--PQSANTRTNTALEAGKLASKMQYVPCIPVDKLPAPGSATSGVAGGLAICIAVDPSGSVYALGDKCPPVNQPLSFGRVDGNSIEDPVLGTKFSLKTGEVVGAWCPSGIGKLLGGLFDPI----GVPTYPVKKKGANIEVQVDVNAKANFESQYWSGVLDAQGKSNGKYY 201          
BLAST of mRNA_H-paniculata_contig7836.15862.1 vs. uniprot
Match: A0A7S2E968_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E968_TRICV)

HSP 1 Score: 165 bits (418), Expect = 1.710e-48
Identity = 83/158 (52.53%), Postives = 106/158 (67.09%), Query Frame = 0
Query:   46 VTMAAGQGPKLDWVNVVSIDNAPAPGMAKSVFVADLDLCVAADSSGLLYVIGNKCPPANQPLSFSKVVDKTIKDPVLGTVVDLETGDVLD-WCPSLLGKLLGPLLGPAPPNAGVVPYKVRSSGGNLQAYVQVNAKAQFEKQYWKGVLDAQGKADGGYY 202
            + MA     KL +V  V++D  P PG+A S     L +C+A D SG ++ +G+KCPP NQPLSF +V + TI+DPVLGT   L+TG+V+  WCPS +GKLLG L  P+    GV  Y V+ +G N++  V VNAKA FE QYW GVLDAQGKADG YY
Sbjct:   30 LNMAKAFPSKLQYVPCVAVDKLPKPGLATSGVAGGLAICIAVDPSGSVFALGDKCPPVNQPLSFGRVSEGTIEDPVLGTKFSLKTGEVVGPWCPSGIGKLLGGLFEPS----GVPVYPVKKAGANIEVQVDVNAKANFESQYWSGVLDAQGKADGKYY 183          
BLAST of mRNA_H-paniculata_contig7836.15862.1 vs. uniprot
Match: A0A7S4J166_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J166_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.850e-48
Identity = 86/178 (48.31%), Postives = 115/178 (64.61%), Query Frame = 0
Query:   29 SSSSFSLRPSQVATRPTVTMAAGQGP---KLDWVNVVSIDNAPAPGMAKSVFVADLDLCVAADSSGLLYVIGNKCPPANQPLSFSKVVDKTIKDPVLGTVVDLETGDVLD-WCPSLLGKLLGPLLGPAPPNAGVVPYKVRSSGGNLQAYVQVNAKAQFEKQYWKGVLDAQGKADGGYY 202
            S+ +F+ +P+   T+ +  ++  + P    L +V  + +D+ P PG A S     L +C+A D SG ++ +G+KCPP NQPLSF KV D TI+DPVLGT   L++GDV+  WCPS +GKLLG L  P     GV  Y V+ SG N++  V VNAKA +E QYW GVLDAQGKADG YY
Sbjct:  111 SAVAFTGQPTTFQTKSSTALSMAKKPLGQSLKYVPCIPVDSLPKPGTATSGVAGGLAICIAVDPSGSIFALGDKCPPVNQPLSFGKVADGTIEDPVLGTKFSLKSGDVVGAWCPSGIGKLLGGLFDPY----GVPVYPVKKSGANIEVQVDVNAKANYESQYWSGVLDAQGKADGKYY 284          
BLAST of mRNA_H-paniculata_contig7836.15862.1 vs. uniprot
Match: A0A1E7FKP2_9STRA (Rieske domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKP2_9STRA)

HSP 1 Score: 163 bits (413), Expect = 3.620e-48
Identity = 79/149 (53.02%), Postives = 102/149 (68.46%), Query Frame = 0
Query:   55 KLDWVNVVSIDNAPAPGMAKSVFVADLDLCVAADSSGLLYVIGNKCPPANQPLSFSKVVDKTIKDPVLGTVVDLETGDVLD-WCPSLLGKLLGPLLGPAPPNAGVVPYKVRSSGGNLQAYVQVNAKAQFEKQYWKGVLDAQGKADGGYY 202
            KL +V  +S+D+ PAPG A S     L +C+A D  G +Y +G+KCPP NQPLSF KV+D  I+DPVLGT   L+TG+V+  WCP+ LGKLLG +  P+    GV  Y V+ SG N++  V VNAK  FE +YW G+LDAQGK+DG YY
Sbjct:    7 KLQYVPCISVDDLPAPGGATSGVAGGLAICIAVDPKGAVYALGDKCPPINQPLSFGKVIDGCIQDPVLGTAFSLKTGEVVGKWCPAGLGKLLGGVFSPS----GVPTYPVKKSGKNIEVQVDVNAKLNFEAEYWTGILDAQGKSDGKYY 151          
BLAST of mRNA_H-paniculata_contig7836.15862.1 vs. uniprot
Match: K0SEG8_THAOC (Rieske domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEG8_THAOC)

HSP 1 Score: 162 bits (409), Expect = 4.050e-47
Identity = 87/182 (47.80%), Postives = 113/182 (62.09%), Query Frame = 0
Query:   25 GFLASSSSFSLRPSQVATRPTVTMAAGQG---PKLDWVNVVSIDNAPAPGMAKSVFVADLDLCVAADSSGLLYVIGNKCPPANQPLSFSKVVDK-TIKDPVLGTVVDLETGDVLDWCPSLLGKLLGPLLGPAPPNAGVVPYKVRSSGGNLQAYVQVNAKAQFEKQYWKGVLDAQGKADGGYY 202
              + S+S+F+  P+QVA   T   AAG+    P L +V  +S D+ PA G A S     L +C+A D  G +Y +G+KCPP NQPLSF KV D  TI DPVLGT   L+TG+V+ WCP+ LGKL+G L  P     GV  Y V++ G  ++  V VN K  FE  YW+G+LDAQGK+DG YY
Sbjct:    9 ALVGSASAFA--PAQVARSSTALNAAGEKKRPPSLKYVPCISTDDLPAAGSATSGVAGGLAICIAVDPRGAVYALGDKCPPVNQPLSFGKVGDDGTISDPVLGTKFSLKTGEVVSWCPTGLGKLIGGLFDPV----GVPTYPVKAKGKTVEVQVDVNYKYNFETDYWQGILDAQGKSDGKYY 184          
BLAST of mRNA_H-paniculata_contig7836.15862.1 vs. uniprot
Match: A0A7R9VVY4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVY4_9STRA)

HSP 1 Score: 161 bits (407), Expect = 8.640e-47
Identity = 82/165 (49.70%), Postives = 103/165 (62.42%), Query Frame = 0
Query:   39 QVATRPTVTMAAGQGPKLDWVNVVSIDNAPAPGMAKSVFVADLDLCVAADSSGLLYVIGNKCPPANQPLSFSKVVDKTIKDPVLGTVVDLETGDVL-DWCPSLLGKLLGPLLGPAPPNAGVVPYKVRSSGGNLQAYVQVNAKAQFEKQYWKGVLDAQGKADGGYY 202
            Q  +   + MA      L +V  + ++  P PG A S     L +C+A D SG +Y +G+KCPP NQPLSF KV    I+DPVLGT   L+TG+V+ DWCPS +GKLLG L  P     GV  + V+ SG N++  V VNAKA FE QYW G+LDAQGKADG YY
Sbjct:   26 QTKSSTALNMAGLFQQSLKYVPCIPVEQLPKPGTATSGVAGGLAICIAVDPSGSIYALGDKCPPVNQPLSFGKVTAGAIEDPVLGTKFSLKTGEVVGDWCPSGIGKLLGGLFEPV----GVPVFPVKKSGANIEVQVDVNAKANFESQYWSGILDAQGKADGKYY 186          
BLAST of mRNA_H-paniculata_contig7836.15862.1 vs. uniprot
Match: A0A6U5FSV0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5FSV0_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.790e-46
Identity = 85/181 (46.96%), Postives = 116/181 (64.09%), Query Frame = 0
Query:   25 GFLASSSSFSLRPSQ--VATRPTVTMAAGQGPK-LDWVNVVSIDNAPAPGMAKSVFVADLDLCVAADSSGLLYVIGNKCPPANQPLSFSKVVDKTIKDPVLGTVVDLETGDVLDWCPSLLGKLLGPLLGPAPPNAGVVPYKVRSSGGNLQAYVQVNAKAQFEKQYWKGVLDAQGKADGGYY 202
              +AS ++F+   S     TR +  ++A +  + L +V V++ + AP PG A S     L +CVA   +G LY +G+KCPP NQPLSF KV   TI+DPVLGT   L+TG+V+DWCP+ +GKL+G L  PA    GV  Y ++S+G N++  V VN K  FE +YW GVLDAQGKA+G YY
Sbjct:   11 ALIASVAAFAPNTSSKPFGTRSSTELSAKKFKQALKYVPVITKEQAPKPGSATSGVAGGLAICVACSPTGQLYALGDKCPPVNQPLSFGKVNKDTIEDPVLGTKFSLKTGEVVDWCPAGIGKLVGGLFEPA----GVPTYPIKSTGKNIEVQVDVNYKLNFEAEYWSGVLDAQGKANGKYY 187          
BLAST of mRNA_H-paniculata_contig7836.15862.1 vs. uniprot
Match: A0A7S2S0F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0F0_9STRA)

HSP 1 Score: 159 bits (403), Expect = 7.140e-46
Identity = 81/165 (49.09%), Postives = 102/165 (61.82%), Query Frame = 0
Query:   39 QVATRPTVTMAAGQGPKLDWVNVVSIDNAPAPGMAKSVFVADLDLCVAADSSGLLYVIGNKCPPANQPLSFSKVVDKTIKDPVLGTVVDLETGDVLD-WCPSLLGKLLGPLLGPAPPNAGVVPYKVRSSGGNLQAYVQVNAKAQFEKQYWKGVLDAQGKADGGYY 202
            +VA+R  V+M A  GPKL +V+ +   + PAPG A S     LD+C+A    GL+Y +GNK PP   PLS  KV  KTIKDP  GT  DL+TG V+  WCP   G ++G L  P     GV  Y+V+  G N+Q  V VN K  FE +YWKG+LDAQGK +GGYY
Sbjct:   50 RVASRGQVSMMAKTGPKLKYVDAIKTADLPAPGKAVSAVAGGLDVCIAVAEDGLIYAMGNKAPPTGTPLSGGKVGKKTIKDPQFGTEFDLDTGAVVGKWCPGGFGFVIGKLFEPV----GVPTYRVKKGGANIQVEVDVNFKENFESKYWKGILDAQGKTEGGYY 210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7836.15862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI27_ECTSI6.970e-7559.89Rieske domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6U3SB47_9STRA9.320e-5048.57Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S0AYK8_9STRA1.480e-4848.31Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2E968_TRICV1.710e-4852.53Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4J166_9STRA2.850e-4848.31Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A1E7FKP2_9STRA3.620e-4853.02Rieske domain-containing protein n=1 Tax=Fragilari... [more]
K0SEG8_THAOC4.050e-4747.80Rieske domain-containing protein n=1 Tax=Thalassio... [more]
A0A7R9VVY4_9STRA8.640e-4749.70Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A6U5FSV0_9STRA1.790e-4646.96Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2S0F0_9STRA7.140e-4649.09Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 55..171
e-value: 1.2E-5
score: 27.0
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 57..174
IPR012748Rieske-like [2Fe-2S] domain, NirD-typePFAMPF13806Rieske_2coord: 58..171
e-value: 2.5E-9
score: 37.0
NoneNo IPR availablePANTHERPTHR21496FERREDOXIN-RELATEDcoord: 50..181
NoneNo IPR availablePANTHERPTHR21496:SF22coord: 50..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.648
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 58..172
score: 9.611

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7836contigH-paniculata_contig7836:7165..9801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7836.15862.1mRNA_H-paniculata_contig7836.15862.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7836 7047..10509 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7836.15862.1 ID=prot_H-paniculata_contig7836.15862.1|Name=mRNA_H-paniculata_contig7836.15862.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp
MNSSVSRFFIVIIFHAMMVIPRCTGFLASSSSFSLRPSQVATRPTVTMAA
GQGPKLDWVNVVSIDNAPAPGMAKSVFVADLDLCVAADSSGLLYVIGNKC
PPANQPLSFSKVVDKTIKDPVLGTVVDLETGDVLDWCPSLLGKLLGPLLG
PAPPNAGVVPYKVRSSGGNLQAYVQVNAKAQFEKQYWKGVLDAQGKADGG
YY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf
IPR012748Rieske-like_NirD
IPR017941Rieske_2Fe-2S